RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 MDFIQ99750 246 aa7.32□□□□□ -1.24
SNORD88C-201ENST00000408061 C11orf68Q9H3H3 251 aaKnown RBP7.32□□□□□ -1.24
SNORD88C-201ENST00000408061 A0A087WX48 190 aa7.31□□□□□ -1.24
SNORD88C-201ENST00000408061 P0DMU3 169 aa7.31□□□□□ -1.24
SNORD88C-201ENST00000408061 FAM231AP0DMU4 169 aa7.31□□□□□ -1.24
SNORD88C-201ENST00000408061 FAM231CP0DMU5 169 aa7.31□□□□□ -1.24
SNORD88C-201ENST00000408061 DEFB130BP0DP73 79 aa7.31□□□□□ -1.24
SNORD88C-201ENST00000408061 DEFB130AP0DP74 79 aa7.31□□□□□ -1.24
SNORD88C-201ENST00000408061 KRTAP21-3Q3LHN1 58 aa7.31□□□□□ -1.24
SNORD88C-201ENST00000408061 SH2D6Q7Z4S9 175 aa7.31□□□□□ -1.24
SNORD88C-201ENST00000408061 ZNF664Q8N3J9 261 aa7.31□□□□□ -1.24
SNORD88C-201ENST00000408061 SPANXA1Q9NS26 97 aa7.31□□□□□ -1.24
SNORD88C-201ENST00000408061 PLNP26678 52 aa7.3□□□□□ -1.24
SNORD88C-201ENST00000408061 ODF1Q14990 250 aa7.3□□□□□ -1.24
SNORD88C-201ENST00000408061 CSDC2Q9Y534 153 aaKnown RBP7.3□□□□□ -1.24
SNORD88C-201ENST00000408061 F8VRH5 84 aa7.29□□□□□ -1.24
SNORD88C-201ENST00000408061 DPM2O94777 84 aa7.29□□□□□ -1.24
SNORD88C-201ENST00000408061 PMVKQ15126 192 aa7.29□□□□□ -1.24
SNORD88C-201ENST00000408061 NEGR1Q7Z3B1 354 aa7.29□□□□□ -1.24
SNORD88C-201ENST00000408061 SPATA25Q9BR10 227 aa7.29□□□□□ -1.24
SNORD88C-201ENST00000408061 TRAV26-1A0A087WT03 109 aa7.28□□□□□ -1.24
SNORD88C-201ENST00000408061 H3BNG1 76 aa7.28□□□□□ -1.24
SNORD88C-201ENST00000408061 IGKCP01834 107 aa7.28□□□□□ -1.24
SNORD88C-201ENST00000408061 LINC00694P0DN24 101 aa7.28□□□□□ -1.24
SNORD88C-201ENST00000408061 MRPS36P82909 103 aaKnown RBP7.28□□□□□ -1.24
SNORD88C-201ENST00000408061 SPATA45Q537H7 98 aa7.28□□□□□ -1.24
SNORD88C-201ENST00000408061 CDPF1Q6NVV7 123 aa7.28□□□□□ -1.24
SNORD88C-201ENST00000408061 MRPL52Q86TS9 123 aaKnown RBP7.28□□□□□ -1.24
SNORD88C-201ENST00000408061 BAALCQ8WXS3 180 aa7.28□□□□□ -1.24
SNORD88C-201ENST00000408061 CHCHD7Q9BUK0 85 aa7.28□□□□□ -1.24
SNORD88C-201ENST00000408061 TRBV25-1A0A075B6N4 114 aa7.27□□□□□ -1.25
SNORD88C-201ENST00000408061 GAGE12JA6NER3 117 aa7.27□□□□□ -1.25
SNORD88C-201ENST00000408061 H0Y8G0 127 aa7.27□□□□□ -1.25
SNORD88C-201ENST00000408061 PAX4O43316 350 aa7.27□□□□□ -1.25
SNORD88C-201ENST00000408061 GAGE1Q13065 139 aa7.27□□□□□ -1.25
SNORD88C-201ENST00000408061 GAGE4Q13068 117 aa7.27□□□□□ -1.25
SNORD88C-201ENST00000408061 GAGE5Q13069 117 aa7.27□□□□□ -1.25
SNORD88C-201ENST00000408061 GAGE13Q4V321 117 aa7.27□□□□□ -1.25
SNORD88C-201ENST00000408061 PMCHL2Q9BQD1 86 aa7.27□□□□□ -1.25
SNORD88C-201ENST00000408061 VCX2Q9H322 139 aa7.27□□□□□ -1.25
SNORD88C-201ENST00000408061 PAM16Q9Y3D7 125 aa7.27□□□□□ -1.25
SNORD88C-201ENST00000408061 CHTOPQ9Y3Y2 248 aaKnown RBP7.27□□□□□ -1.25
SNORD88C-201ENST00000408061 PKD1L1Q8TDX9 2849 aa7.27□□□□□ -1.25
SNORD88C-201ENST00000408061 PRSS29PA6NIE9 313 aa7.26□□□□□ -1.25
SNORD88C-201ENST00000408061 ZNF25P17030 456 aaPredicted RBP7.26□□□□□ -1.25
SNORD88C-201ENST00000408061 RPL39P62891 51 aaKnown RBP7.26□□□□□ -1.25
SNORD88C-201ENST00000408061 MRPL23Q16540 153 aaKnown RBP7.26□□□□□ -1.25
SNORD88C-201ENST00000408061 DGAT2L7PQ6IED9 249 aa7.26□□□□□ -1.25
SNORD88C-201ENST00000408061 LURAP1LQ8IV03 231 aa7.26□□□□□ -1.25
SNORD88C-201ENST00000408061 ATP6V0E2Q8NHE4 81 aa7.26□□□□□ -1.25
SNORD88C-201ENST00000408061 PHLDA1Q8WV24 401 aaPredicted RBP7.26□□□□□ -1.25
SNORD88C-201ENST00000408061 TM2D3Q9BRN9 247 aa7.26□□□□□ -1.25
SNORD88C-201ENST00000408061 MIEN1Q9BRT3 115 aa7.26□□□□□ -1.25
SNORD88C-201ENST00000408061 TMEM243Q9BU79 118 aa7.26□□□□□ -1.25
SNORD88C-201ENST00000408061 CST9LQ9H4G1 147 aa7.26□□□□□ -1.25
SNORD88C-201ENST00000408061 UQCR10Q9UDW1 63 aa7.26□□□□□ -1.25
SNORD88C-201ENST00000408061 Q9UF83 564 aa7.26□□□□□ -1.25
SNORD88C-201ENST00000408061 TRBV6-8A0A0A6YYG3 113 aa7.25□□□□□ -1.25
SNORD88C-201ENST00000408061 K7EIL1 84 aa7.25□□□□□ -1.25
SNORD88C-201ENST00000408061 GYPEP15421 78 aa7.25□□□□□ -1.25
SNORD88C-201ENST00000408061 SBSPONQ8IVN8 264 aa7.25□□□□□ -1.25
SNORD88C-201ENST00000408061 AMELXQ99217 191 aa7.25□□□□□ -1.25
SNORD88C-201ENST00000408061 MRPL35Q9NZE8 188 aaKnown RBP7.25□□□□□ -1.25
SNORD88C-201ENST00000408061 UBE2D4Q9Y2X8 147 aa7.25□□□□□ -1.25
SNORD88C-201ENST00000408061 TRRAPQ9Y4A5 3859 aa7.25□□□□□ -1.25
SNORD88C-201ENST00000408061 IGLV4-3A0A075B6K6 122 aa7.24□□□□□ -1.25
SNORD88C-201ENST00000408061 IGHV3-38A0A0C4DH36 116 aa7.24□□□□□ -1.25
SNORD88C-201ENST00000408061 PCP4L1A6NKN8 68 aa7.24□□□□□ -1.25
SNORD88C-201ENST00000408061 UBE2L6O14933 153 aa7.24□□□□□ -1.25
SNORD88C-201ENST00000408061 IGLC3P0DOY3 106 aa7.24□□□□□ -1.25
SNORD88C-201ENST00000408061 DDTP30046 118 aa7.24□□□□□ -1.25
SNORD88C-201ENST00000408061 SEC11AP67812 179 aa7.24□□□□□ -1.25
SNORD88C-201ENST00000408061 DEFB121Q5J5C9 76 aa7.24□□□□□ -1.25
SNORD88C-201ENST00000408061 NFE4Q86UQ8 179 aa7.24□□□□□ -1.25
SNORD88C-201ENST00000408061 ATOH7Q8N100 152 aa7.24□□□□□ -1.25
SNORD88C-201ENST00000408061 TMEM101Q96IK0 257 aa7.24□□□□□ -1.25
SNORD88C-201ENST00000408061 C2orf88Q9BSF0 95 aa7.24□□□□□ -1.25
SNORD88C-201ENST00000408061 F5H768 121 aa7.23□□□□□ -1.25
SNORD88C-201ENST00000408061 DEFB4AO15263 64 aa7.23□□□□□ -1.25
SNORD88C-201ENST00000408061 DLEU1O43261 78 aa7.23□□□□□ -1.25
SNORD88C-201ENST00000408061 TIRAPP58753 221 aa7.23□□□□□ -1.25
SNORD88C-201ENST00000408061 C12orf74Q32Q52 190 aa7.23□□□□□ -1.25
SNORD88C-201ENST00000408061 NTM-AS1Q6ZSK4 140 aa7.23□□□□□ -1.25
SNORD88C-201ENST00000408061 PRO1933Q9H354 126 aa7.23□□□□□ -1.25
SNORD88C-201ENST00000408061 CELA1Q9UNI1 258 aa7.23□□□□□ -1.25
SNORD88C-201ENST00000408061 ICOSQ9Y6W8 199 aa7.23□□□□□ -1.25
SNORD88C-201ENST00000408061 NBEAL2Q6ZNJ1 2754 aa7.22□□□□□ -1.25
SNORD88C-201ENST00000408061 COX8AP10176 69 aa7.22□□□□□ -1.25
SNORD88C-201ENST00000408061 FGF6P10767 208 aa7.22□□□□□ -1.25
SNORD88C-201ENST00000408061 HERVK_113P61574 105 aa7.22□□□□□ -1.25
SNORD88C-201ENST00000408061 AMMECR1LQ6DCA0 310 aa7.22□□□□□ -1.25
SNORD88C-201ENST00000408061 SLC25A34Q6PIV7 304 aa7.22□□□□□ -1.25
SNORD88C-201ENST00000408061 FAM19A3Q7Z5A8 133 aa7.22□□□□□ -1.25
SNORD88C-201ENST00000408061 OR5A1Q8NGJ0 315 aa7.22□□□□□ -1.25
SNORD88C-201ENST00000408061 VSIG2Q96IQ7 327 aa7.22□□□□□ -1.25
SNORD88C-201ENST00000408061 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.21□□□□□ -1.26
SNORD88C-201ENST00000408061 LOC100131303A0A0U1RQF7 123 aa7.21□□□□□ -1.26
SNORD88C-201ENST00000408061 A0A1B0GUV1 79 aa7.21□□□□□ -1.26
SNORD88C-201ENST00000408061 hDV102S1A0JD36 115 aa7.21□□□□□ -1.26
SNORD88C-201ENST00000408061 IGKV2-29A2NJV5 120 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms