RNA–Protein interactions for RNA: ENST00000407540.7

MATN3-201, Transcript of matrilin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MATN3, Length 2,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3-201ENST00000407540 FSHBP01225 129 aa12.6□□□□□ -0.39
MATN3-201ENST00000407540 RNASE13Q5GAN3 156 aaKnown RBP12.6□□□□□ -0.39
MATN3-201ENST00000407540 TMEM141Q96I45 108 aa12.6□□□□□ -0.39
MATN3-201ENST00000407540 TMEM61Q8N0U2 210 aa12.59□□□□□ -0.39
MATN3-201ENST00000407540 Q6ZSN1 163 aa12.59□□□□□ -0.39
MATN3-201ENST00000407540 TRPT1Q86TN4 253 aaKnown RBP12.59□□□□□ -0.39
MATN3-201ENST00000407540 ZFAND6Q6FIF0 208 aa12.58□□□□□ -0.4
MATN3-201ENST00000407540 C11orf44Q8N8P7 122 aa12.58□□□□□ -0.4
MATN3-201ENST00000407540 LINC01619G3V211 115 aa12.58□□□□□ -0.4
MATN3-201ENST00000407540 A0A0J9YXV3 536 aa12.57□□□□□ -0.4
MATN3-201ENST00000407540 C20orf203Q8NBC4 194 aa12.57□□□□□ -0.4
MATN3-201ENST00000407540 AMELXQ99217 191 aa12.57□□□□□ -0.4
MATN3-201ENST00000407540 HERVK_113P61574 105 aa12.57□□□□□ -0.4
MATN3-201ENST00000407540 TNFRSF18Q9Y5U5 241 aa12.57□□□□□ -0.4
MATN3-201ENST00000407540 ITPR3Q14573 2671 aa12.57□□□□□ -0.4
MATN3-201ENST00000407540 H3BMM0 161 aa12.56□□□□□ -0.4
MATN3-201ENST00000407540 CCDC179H3BU77 68 aa12.56□□□□□ -0.4
MATN3-201ENST00000407540 TEX29Q8N6K0 151 aa12.56□□□□□ -0.4
MATN3-201ENST00000407540 DLX4Q92988 240 aaPredicted RBP12.56□□□□□ -0.4
MATN3-201ENST00000407540 NACAE9PAV3 2078 aa12.56□□□□□ -0.4
MATN3-201ENST00000407540 I3L3M4 83 aa12.56□□□□□ -0.4
MATN3-201ENST00000407540 NSUN5P1Q3KNT7 163 aa12.56□□□□□ -0.4
MATN3-201ENST00000407540 J3QQQ9 107 aa12.55□□□□□ -0.4
MATN3-201ENST00000407540 Q96MF0 132 aa12.55□□□□□ -0.4
MATN3-201ENST00000407540 IGLV4-3A0A075B6K6 122 aa12.55□□□□□ -0.4
MATN3-201ENST00000407540 LOC107984156A0A0G2JMH3 177 aa12.55□□□□□ -0.4
MATN3-201ENST00000407540 ADARB2-AS1A8MUL3 147 aa12.55□□□□□ -0.4
MATN3-201ENST00000407540 UBE2D1P51668 147 aa12.55□□□□□ -0.4
MATN3-201ENST00000407540 ARL17AQ8IVW1 177 aa12.55□□□□□ -0.4
MATN3-201ENST00000407540 FAM104AQ969W3 186 aa12.55□□□□□ -0.4
MATN3-201ENST00000407540 CITED1Q99966 193 aa12.55□□□□□ -0.4
MATN3-201ENST00000407540 TRGV11A0A075B6L2 103 aa12.54□□□□□ -0.4
MATN3-201ENST00000407540 PAPPA-AS1Q5QFB9 102 aa12.54□□□□□ -0.4
MATN3-201ENST00000407540 RNF152Q8N8N0 203 aa12.54□□□□□ -0.4
MATN3-201ENST00000407540 PPDPFLQ8WWR9 84 aa12.54□□□□□ -0.4
MATN3-201ENST00000407540 JMJD1CQ15652 2540 aa12.53□□□□□ -0.4
MATN3-201ENST00000407540 IGHV3-30P01768 117 aa12.53□□□□□ -0.4
MATN3-201ENST00000407540 IGHV3-30-5P0DP03 117 aa12.53□□□□□ -0.4
MATN3-201ENST00000407540 IGHV3-38A0A0C4DH36 116 aa12.53□□□□□ -0.4
MATN3-201ENST00000407540 CD28P10747 220 aa12.53□□□□□ -0.4
MATN3-201ENST00000407540 ZNF22P17026 224 aaPredicted RBP12.53□□□□□ -0.4
MATN3-201ENST00000407540 RHOHQ15669 191 aa12.53□□□□□ -0.4
MATN3-201ENST00000407540 TRBV20-1A0A075B6N2 111 aa12.52□□□□□ -0.4
MATN3-201ENST00000407540 LGALS3P17931 250 aaKnown RBP12.52□□□□□ -0.4
MATN3-201ENST00000407540 C2CD3Q4AC94 2353 aa12.52□□□□□ -0.41
MATN3-201ENST00000407540 ACANP16112 2415 aa12.52□□□□□ -0.41
MATN3-201ENST00000407540 TMEM223A0PJW6 202 aa12.52□□□□□ -0.41
MATN3-201ENST00000407540 CFC1BP0CG36 223 aa12.52□□□□□ -0.41
MATN3-201ENST00000407540 CFC1P0CG37 223 aa12.52□□□□□ -0.41
MATN3-201ENST00000407540 NDUFA11Q86Y39 141 aa12.52□□□□□ -0.41
MATN3-201ENST00000407540 SLC25A29Q8N8R3 303 aa12.52□□□□□ -0.41
MATN3-201ENST00000407540 SPXQ9BT56 116 aa12.52□□□□□ -0.41
MATN3-201ENST00000407540 VCX2Q9H322 139 aa12.52□□□□□ -0.41
MATN3-201ENST00000407540 A0A1W2PRX2 142 aa12.51□□□□□ -0.41
MATN3-201ENST00000407540 GAGE12JA6NER3 117 aa12.51□□□□□ -0.41
MATN3-201ENST00000407540 GAGE7O76087 117 aa12.51□□□□□ -0.41
MATN3-201ENST00000407540 GAGE12FP0CL80 117 aa12.51□□□□□ -0.41
MATN3-201ENST00000407540 GAGE12GP0CL81 117 aa12.51□□□□□ -0.41
MATN3-201ENST00000407540 GAGE12IP0CL82 117 aa12.51□□□□□ -0.41
MATN3-201ENST00000407540 PSMB2P49721 201 aa12.51□□□□□ -0.41
MATN3-201ENST00000407540 GAGE4Q13068 117 aa12.51□□□□□ -0.41
MATN3-201ENST00000407540 DEFB113Q30KQ7 82 aa12.51□□□□□ -0.41
MATN3-201ENST00000407540 TEN1Q86WV5 123 aa12.51□□□□□ -0.41
MATN3-201ENST00000407540 ZNF843Q8N446 348 aa12.51□□□□□ -0.41
MATN3-201ENST00000407540 MAP6D1Q9H9H5 199 aa12.51□□□□□ -0.41
MATN3-201ENST00000407540 FLNAP21333 2647 aaKnown RBP12.51□□□□□ -0.41
MATN3-201ENST00000407540 RHODO00212 210 aa12.51□□□□□ -0.41
MATN3-201ENST00000407540 A8MZ25 164 aa12.5□□□□□ -0.41
MATN3-201ENST00000407540 NDUFV3P56181 108 aaKnown RBP12.5□□□□□ -0.41
MATN3-201ENST00000407540 LINC01587Q99440 93 aa12.5□□□□□ -0.41
MATN3-201ENST00000407540 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.5□□□□□ -0.41
MATN3-201ENST00000407540 TRAV8-3A0A0A6YYJ7 113 aa12.5□□□□□ -0.41
MATN3-201ENST00000407540 IGKV2-29A2NJV5 120 aaPredicted RBP12.5□□□□□ -0.41
MATN3-201ENST00000407540 EIF4EBP3O60516 100 aaPredicted RBP12.5□□□□□ -0.41
MATN3-201ENST00000407540 IGHV3OR16-12A0A075B7B8 117 aa12.49□□□□□ -0.41
MATN3-201ENST00000407540 HIST2H2BCQ6DN03 193 aa12.49□□□□□ -0.41
MATN3-201ENST00000407540 TRAV2A0A0B4J234 112 aa12.49□□□□□ -0.41
MATN3-201ENST00000407540 DYNLRB2Q8TF09 96 aa12.49□□□□□ -0.41
MATN3-201ENST00000407540 RAX2Q96IS3 184 aa12.49□□□□□ -0.41
MATN3-201ENST00000407540 XCL2Q9UBD3 114 aa12.49□□□□□ -0.41
MATN3-201ENST00000407540 MTORP42345 2549 aa12.48□□□□□ -0.41
MATN3-201ENST00000407540 C10orf126Q8N4M7 172 aa12.48□□□□□ -0.41
MATN3-201ENST00000407540 M0R2P5 195 aa12.48□□□□□ -0.41
MATN3-201ENST00000407540 H7C2G1 150 aa12.47□□□□□ -0.41
MATN3-201ENST00000407540 DEFB114Q30KQ6 69 aa12.47□□□□□ -0.41
MATN3-201ENST00000407540 KRTAP1-3Q8IUG1 177 aa12.47□□□□□ -0.41
MATN3-201ENST00000407540 A4D1N5 150 aa12.47□□□□□ -0.41
MATN3-201ENST00000407540 LEPROTO15243 131 aa12.47□□□□□ -0.41
MATN3-201ENST00000407540 Q8N2B8 174 aa12.46□□□□□ -0.41
MATN3-201ENST00000407540 C11orf72Q8NBR9 251 aa12.46□□□□□ -0.41
MATN3-201ENST00000407540 C4orf3Q8WVX3 66 aa12.46□□□□□ -0.41
MATN3-201ENST00000407540 TRAV4A0A0B4J268 109 aa12.46□□□□□ -0.42
MATN3-201ENST00000407540 PEMTQ9UBM1 199 aa12.46□□□□□ -0.42
MATN3-201ENST00000407540 SETXQ7Z333 2677 aaKnown RBP12.46□□□□□ -0.42
MATN3-201ENST00000407540 CRLF1O75462 422 aa12.45□□□□□ -0.42
MATN3-201ENST00000407540 TCL1BO95988 128 aa12.45□□□□□ -0.42
MATN3-201ENST00000407540 UBE2D3P61077 147 aa12.45□□□□□ -0.42
MATN3-201ENST00000407540 UBE2D2P62837 147 aa12.45□□□□□ -0.42
MATN3-201ENST00000407540 GAGE2BQ13066 116 aa12.45□□□□□ -0.42
MATN3-201ENST00000407540 GAGE2EQ4V326 116 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms