RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 V9GYH0 126 aa0.84□□□□□ -2.27
HMGB1P17-201ENST00000403495 MRC1P22897 1456 aa0.84□□□□□ -2.28
HMGB1P17-201ENST00000403495 MRC2Q9UBG0 1479 aa0.84□□□□□ -2.28
HMGB1P17-201ENST00000403495 ARHGAP5Q13017 1502 aa0.84□□□□□ -2.28
HMGB1P17-201ENST00000403495 CITO14578 2027 aa0.83□□□□□ -2.28
HMGB1P17-201ENST00000403495 S100A10P60903 97 aa0.83□□□□□ -2.28
HMGB1P17-201ENST00000403495 ACBD7Q8N6N7 88 aa0.83□□□□□ -2.28
HMGB1P17-201ENST00000403495 DYNLRB1Q9NP97 96 aa0.83□□□□□ -2.28
HMGB1P17-201ENST00000403495 NDUFA4L2Q9NRX3 87 aa0.83□□□□□ -2.28
HMGB1P17-201ENST00000403495 PHIPQ8WWQ0 1821 aa0.82□□□□□ -2.28
HMGB1P17-201ENST00000403495 TNS1Q9HBL0 1735 aaKnown RBP0.82□□□□□ -2.28
HMGB1P17-201ENST00000403495 NAP1L6A6NFF2 107 aa0.82□□□□□ -2.28
HMGB1P17-201ENST00000403495 H3BQ15 152 aa0.82□□□□□ -2.28
HMGB1P17-201ENST00000403495 M0R135 149 aa0.82□□□□□ -2.28
HMGB1P17-201ENST00000403495 S100A8P05109 93 aa0.82□□□□□ -2.28
HMGB1P17-201ENST00000403495 Q6ZRX8 168 aa0.82□□□□□ -2.28
HMGB1P17-201ENST00000403495 CNTRLQ7Z7A1 2325 aa0.82□□□□□ -2.28
HMGB1P17-201ENST00000403495 SHROOM2Q13796 1616 aa0.82□□□□□ -2.28
HMGB1P17-201ENST00000403495 ZMYM4Q5VZL5 1548 aa0.81□□□□□ -2.28
HMGB1P17-201ENST00000403495 CTXND1A0A1B0GTU2 59 aa0.81□□□□□ -2.28
HMGB1P17-201ENST00000403495 GCHFRP30047 84 aa0.81□□□□□ -2.28
HMGB1P17-201ENST00000403495 FAM213BQ8TBF2 198 aa0.81□□□□□ -2.28
HMGB1P17-201ENST00000403495 UQCR10Q9UDW1 63 aa0.81□□□□□ -2.28
HMGB1P17-201ENST00000403495 CC2D2AQ9P2K1 1620 aa0.81□□□□□ -2.28
HMGB1P17-201ENST00000403495 SPHKAPQ2M3C7 1700 aa0.81□□□□□ -2.28
HMGB1P17-201ENST00000403495 VPS8Q8N3P4 1428 aa0.81□□□□□ -2.28
HMGB1P17-201ENST00000403495 SIPA1L3O60292 1781 aaPredicted RBP0.8□□□□□ -2.28
HMGB1P17-201ENST00000403495 LOC285095A0A1B0GVY8 99 aa0.8□□□□□ -2.28
HMGB1P17-201ENST00000403495 CHKB-CPT1BH3BT56 60 aa0.8□□□□□ -2.28
HMGB1P17-201ENST00000403495 M0R143 59 aa0.8□□□□□ -2.28
HMGB1P17-201ENST00000403495 HMGN4O00479 90 aa0.8□□□□□ -2.28
HMGB1P17-201ENST00000403495 NCMAPQ5T1S8 102 aa0.8□□□□□ -2.28
HMGB1P17-201ENST00000403495 CFAP126Q5VTH2 177 aa0.8□□□□□ -2.28
HMGB1P17-201ENST00000403495 Q5VV11 94 aa0.8□□□□□ -2.28
HMGB1P17-201ENST00000403495 MANBALQ9NQG1 85 aa0.8□□□□□ -2.28
HMGB1P17-201ENST00000403495 CCNB3Q8WWL7 1395 aa0.8□□□□□ -2.28
HMGB1P17-201ENST00000403495 ASCC3Q8N3C0 2202 aaKnown RBP0.8□□□□□ -2.28
HMGB1P17-201ENST00000403495 GOLGA3Q08378 1498 aa0.8□□□□□ -2.28
HMGB1P17-201ENST00000403495 SSC5DA1L4H1 1573 aa0.79□□□□□ -2.28
HMGB1P17-201ENST00000403495 CRYM-AS1A6NIL9 109 aa0.79□□□□□ -2.28
HMGB1P17-201ENST00000403495 KRTDAPP60985 99 aa0.79□□□□□ -2.28
HMGB1P17-201ENST00000403495 Q0VG73 95 aa0.79□□□□□ -2.28
HMGB1P17-201ENST00000403495 FAM167A-AS1Q96KT0 104 aa0.79□□□□□ -2.28
HMGB1P17-201ENST00000403495 FAM103A1Q9BTL3 118 aaKnown RBP0.79□□□□□ -2.28
HMGB1P17-201ENST00000403495 C10orf95Q9H7T3 257 aa0.79□□□□□ -2.28
HMGB1P17-201ENST00000403495 NPVFQ9HCQ7 196 aa0.79□□□□□ -2.28
HMGB1P17-201ENST00000403495 F8VRH5 84 aa0.78□□□□□ -2.28
HMGB1P17-201ENST00000403495 TMEM170BQ5T4T1 132 aa0.78□□□□□ -2.28
HMGB1P17-201ENST00000403495 SMIM4Q8WVI0 70 aa0.78□□□□□ -2.28
HMGB1P17-201ENST00000403495 AMELXQ99217 191 aa0.78□□□□□ -2.28
HMGB1P17-201ENST00000403495 AP4S1Q9Y587 144 aa0.78□□□□□ -2.28
HMGB1P17-201ENST00000403495 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.29
HMGB1P17-201ENST00000403495 TRANK1O15050 2925 aa0.78□□□□□ -2.29
HMGB1P17-201ENST00000403495 LOC285556D6RIA3 1793 aa0.78□□□□□ -2.29
HMGB1P17-201ENST00000403495 USP24Q9UPU5 2620 aa0.77□□□□□ -2.29
HMGB1P17-201ENST00000403495 FBN2P35556 2912 aa0.77□□□□□ -2.29
HMGB1P17-201ENST00000403495 TRAV22A0A0B4J277 110 aa0.77□□□□□ -2.29
HMGB1P17-201ENST00000403495 IGLC7A0M8Q6 106 aa0.77□□□□□ -2.29
HMGB1P17-201ENST00000403495 G3V318 75 aa0.77□□□□□ -2.29
HMGB1P17-201ENST00000403495 GNGT2O14610 69 aa0.77□□□□□ -2.29
HMGB1P17-201ENST00000403495 UQCR11O14957 56 aa0.77□□□□□ -2.29
HMGB1P17-201ENST00000403495 APOC3P02656 99 aa0.77□□□□□ -2.29
HMGB1P17-201ENST00000403495 BAGE2Q86Y30 109 aa0.77□□□□□ -2.29
HMGB1P17-201ENST00000403495 PROK2Q9HC23 129 aa0.77□□□□□ -2.29
HMGB1P17-201ENST00000403495 CDC42SE2Q9NRR3 84 aa0.77□□□□□ -2.29
HMGB1P17-201ENST00000403495 LAMC3Q9Y6N6 1575 aa0.77□□□□□ -2.29
HMGB1P17-201ENST00000403495 PRDM2Q13029 1718 aa0.77□□□□□ -2.29
HMGB1P17-201ENST00000403495 PATJQ8NI35 1801 aa0.77□□□□□ -2.29
HMGB1P17-201ENST00000403495 PLXNA1Q9UIW2 1896 aa0.77□□□□□ -2.29
HMGB1P17-201ENST00000403495 ZGRF1Q86YA3 2104 aa0.77□□□□□ -2.29
HMGB1P17-201ENST00000403495 GPR98Q8WXG9 6306 aa0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 NOTCH1P46531 2555 aa0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 MAP2P11137 1827 aaKnown RBP0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 IFT172Q9UG01 1749 aa0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 ABCC5O15440 1437 aa0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 hADV29S1A0JD25 119 aa0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 SFT2D2O95562 160 aa0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 MPC2O95563 127 aa0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 NMBP08949 121 aa0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 COX6CP09669 75 aa0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 UBE2D3P61077 147 aa0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 UBE2D2P62837 147 aa0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 SEC11AP67812 179 aa0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 COX17Q14061 63 aa0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 PRO1854Q9UHT4 67 aa0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 LINC01558Q9Y6Z2 57 aa0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 AHNAK2Q8IVF2 5795 aa0.76□□□□□ -2.29
HMGB1P17-201ENST00000403495 PARP14Q460N5 1801 aa0.75□□□□□ -2.29
HMGB1P17-201ENST00000403495 ARFGEF1Q9Y6D6 1849 aa0.75□□□□□ -2.29
HMGB1P17-201ENST00000403495 ABCC10Q5T3U5 1492 aa0.75□□□□□ -2.29
HMGB1P17-201ENST00000403495 SHANK2Q9UPX8 1470 aa0.75□□□□□ -2.29
HMGB1P17-201ENST00000403495 ZNF469Q96JG9 3925 aaPredicted RBP0.75□□□□□ -2.29
HMGB1P17-201ENST00000403495 PIN1P1O15428 100 aa0.75□□□□□ -2.29
HMGB1P17-201ENST00000403495 MT-ATP8P03928 68 aa0.75□□□□□ -2.29
HMGB1P17-201ENST00000403495 LINC00032P0C843 101 aa0.75□□□□□ -2.29
HMGB1P17-201ENST00000403495 TRAPPC2P0DI81 140 aa0.75□□□□□ -2.29
HMGB1P17-201ENST00000403495 TRAPPC2BP0DI82 140 aa0.75□□□□□ -2.29
HMGB1P17-201ENST00000403495 SPINK7P58062 85 aa0.75□□□□□ -2.29
HMGB1P17-201ENST00000403495 PKIAP61925 76 aa0.75□□□□□ -2.29
HMGB1P17-201ENST00000403495 SPATA8Q6RVD6 105 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms