RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 OR5A1Q8NGJ0 315 aa11.41□□□□□ -0.58
CDC42-203ENST00000400259 IGHV3-73A0A0B4J1V6 119 aa11.4□□□□□ -0.58
CDC42-203ENST00000400259 C9orf118A6NHY6 69 aa11.4□□□□□ -0.58
CDC42-203ENST00000400259 RS1O15537 224 aa11.4□□□□□ -0.58
CDC42-203ENST00000400259 TM2D2Q9BX73 214 aa11.4□□□□□ -0.58
CDC42-203ENST00000400259 MYMXA0A1B0GTQ4 84 aa11.4□□□□□ -0.58
CDC42-203ENST00000400259 MTORP42345 2549 aa11.4□□□□□ -0.58
CDC42-203ENST00000400259 K7ERJ3 54 aa11.39□□□□□ -0.59
CDC42-203ENST00000400259 IGHV3-53P01767 116 aa11.39□□□□□ -0.59
CDC42-203ENST00000400259 SMAGPQ0VAQ4 97 aa11.39□□□□□ -0.59
CDC42-203ENST00000400259 PRADC1Q9BSG0 188 aa11.39□□□□□ -0.59
CDC42-203ENST00000400259 Q6ZSN1 163 aa11.39□□□□□ -0.59
CDC42-203ENST00000400259 CEND1Q8N111 149 aa11.39□□□□□ -0.59
CDC42-203ENST00000400259 DNAJC30Q96LL9 226 aa11.39□□□□□ -0.59
CDC42-203ENST00000400259 SMR3AQ99954 134 aa11.39□□□□□ -0.59
CDC42-203ENST00000400259 GTSF1LQ9H1H1 148 aa11.39□□□□□ -0.59
CDC42-203ENST00000400259 MRPL16Q9NX20 251 aaKnown RBP11.39□□□□□ -0.59
CDC42-203ENST00000400259 TNFRSF18Q9Y5U5 241 aa11.39□□□□□ -0.59
CDC42-203ENST00000400259 NFE4Q86UQ8 179 aa11.38□□□□□ -0.59
CDC42-203ENST00000400259 PYGO1Q9Y3Y4 419 aa11.38□□□□□ -0.59
CDC42-203ENST00000400259 FASNP49327 2511 aaKnown RBP11.38□□□□□ -0.59
CDC42-203ENST00000400259 SETD2Q9BYW2 2564 aaPredicted RBP11.37□□□□□ -0.59
CDC42-203ENST00000400259 LY6G6DO95868 133 aa11.37□□□□□ -0.59
CDC42-203ENST00000400259 EMP1P54849 157 aa11.37□□□□□ -0.59
CDC42-203ENST00000400259 HERVK_113P61574 105 aa11.37□□□□□ -0.59
CDC42-203ENST00000400259 ZNF479Q96JC4 524 aa11.37□□□□□ -0.59
CDC42-203ENST00000400259 C19orf73Q9NVV2 129 aa11.37□□□□□ -0.59
CDC42-203ENST00000400259 IGLV4-3A0A075B6K6 122 aa11.36□□□□□ -0.59
CDC42-203ENST00000400259 NDUFA11Q86Y39 141 aa11.36□□□□□ -0.59
CDC42-203ENST00000400259 ZNRF2Q8NHG8 242 aa11.36□□□□□ -0.59
CDC42-203ENST00000400259 GIG44P09565 113 aaPredicted RBP11.35□□□□□ -0.59
CDC42-203ENST00000400259 TMEM263Q8WUH6 116 aaKnown RBP11.35□□□□□ -0.59
CDC42-203ENST00000400259 HIVEP2P31629 2446 aa11.35□□□□□ -0.59
CDC42-203ENST00000400259 TRBV7-3A0A075B6L6 115 aa11.35□□□□□ -0.59
CDC42-203ENST00000400259 OPRPNQ99935 248 aaPredicted RBP11.35□□□□□ -0.59
CDC42-203ENST00000400259 Q9UF83 564 aa11.35□□□□□ -0.59
CDC42-203ENST00000400259 GCN1Q92616 2671 aaKnown RBP11.34□□□□□ -0.59
CDC42-203ENST00000400259 GAGE12HA6NDE8 117 aa11.34□□□□□ -0.59
CDC42-203ENST00000400259 SMIM13P0DJ93 91 aa11.34□□□□□ -0.59
CDC42-203ENST00000400259 PHLDA1Q8WV24 401 aaPredicted RBP11.34□□□□□ -0.59
CDC42-203ENST00000400259 SPATA25Q9BR10 227 aa11.34□□□□□ -0.59
CDC42-203ENST00000400259 NHP2Q9NX24 153 aaKnown RBP11.34□□□□□ -0.59
CDC42-203ENST00000400259 IGHV3OR16-12A0A075B7B8 117 aa11.33□□□□□ -0.6
CDC42-203ENST00000400259 ZNF815PA8K554 130 aa11.33□□□□□ -0.6
CDC42-203ENST00000400259 J3QR89 54 aa11.33□□□□□ -0.6
CDC42-203ENST00000400259 KRTAP10-3P60369 221 aa11.33□□□□□ -0.6
CDC42-203ENST00000400259 FAM104AQ969W3 186 aa11.33□□□□□ -0.6
CDC42-203ENST00000400259 AMELXQ99217 191 aa11.33□□□□□ -0.6
CDC42-203ENST00000400259 CHCHD7Q9BUK0 85 aa11.33□□□□□ -0.6
CDC42-203ENST00000400259 A0A1W2PPM0 123 aa11.33□□□□□ -0.6
CDC42-203ENST00000400259 VCX2Q9H322 139 aa11.33□□□□□ -0.6
CDC42-203ENST00000400259 TSPAN13O95857 204 aa11.32□□□□□ -0.6
CDC42-203ENST00000400259 TMEM170BQ5T4T1 132 aa11.32□□□□□ -0.6
CDC42-203ENST00000400259 HIST1H4GQ99525 98 aa11.32□□□□□ -0.6
CDC42-203ENST00000400259 GEMIN7Q9H840 131 aaKnown RBP11.32□□□□□ -0.6
CDC42-203ENST00000400259 PGPEP1Q9NXJ5 209 aa11.32□□□□□ -0.6
CDC42-203ENST00000400259 DAZ2Q13117 558 aaKnown RBP11.32□□□□□ -0.6
CDC42-203ENST00000400259 SPANXA1Q9NS26 97 aa11.32□□□□□ -0.6
CDC42-203ENST00000400259 SETXQ7Z333 2677 aaKnown RBP11.31□□□□□ -0.6
CDC42-203ENST00000400259 TRGV1A0A0A0MS02 117 aa11.31□□□□□ -0.6
CDC42-203ENST00000400259 C1QTNF4Q9BXJ3 329 aa11.31□□□□□ -0.6
CDC42-203ENST00000400259 WFDC10AQ9H1F0 79 aa11.31□□□□□ -0.6
CDC42-203ENST00000400259 TMEM223A0PJW6 202 aa11.3□□□□□ -0.6
CDC42-203ENST00000400259 PLEKHB2Q96CS7 222 aa11.3□□□□□ -0.6
CDC42-203ENST00000400259 TRAV4A0A0B4J268 109 aa11.3□□□□□ -0.6
CDC42-203ENST00000400259 ZNF22P17026 224 aaPredicted RBP11.3□□□□□ -0.6
CDC42-203ENST00000400259 SAMD5Q5TGI4 173 aa11.3□□□□□ -0.6
CDC42-203ENST00000400259 CSNK1G2-AS1Q8NCQ2 148 aa11.3□□□□□ -0.6
CDC42-203ENST00000400259 C16orf74Q96GX8 76 aa11.3□□□□□ -0.6
CDC42-203ENST00000400259 UBE2D4Q9Y2X8 147 aa11.3□□□□□ -0.6
CDC42-203ENST00000400259 TEX48A0A1B0GUV7 120 aa11.29□□□□□ -0.6
CDC42-203ENST00000400259 RPL24P83731 157 aaKnown RBP11.29□□□□□ -0.6
CDC42-203ENST00000400259 LINC00482Q8N8I6 264 aa11.29□□□□□ -0.6
CDC42-203ENST00000400259 SPCS1Q9Y6A9 102 aa11.29□□□□□ -0.6
CDC42-203ENST00000400259 TRBV10-1A0A0K0K1A3 114 aa11.29□□□□□ -0.6
CDC42-203ENST00000400259 A0A1B0GWB2 263 aa11.29□□□□□ -0.6
CDC42-203ENST00000400259 PLAC8L1A1L4L8 177 aa11.29□□□□□ -0.6
CDC42-203ENST00000400259 TSPEAR-AS2P59090 65 aa11.29□□□□□ -0.6
CDC42-203ENST00000400259 MRPS36P82909 103 aaKnown RBP11.29□□□□□ -0.6
CDC42-203ENST00000400259 Q6ZTI0 123 aa11.29□□□□□ -0.6
CDC42-203ENST00000400259 LEPROTO15243 131 aa11.28□□□□□ -0.6
CDC42-203ENST00000400259 SCGB1D4Q6XE38 83 aa11.28□□□□□ -0.6
CDC42-203ENST00000400259 A0A0J9YXV3 536 aa11.28□□□□□ -0.6
CDC42-203ENST00000400259 J3QQQ9 107 aa11.28□□□□□ -0.6
CDC42-203ENST00000400259 A0A0J9YY99 117 aa11.27□□□□□ -0.61
CDC42-203ENST00000400259 RPL35AP18077 110 aaKnown RBP11.27□□□□□ -0.61
CDC42-203ENST00000400259 C12orf74Q32Q52 190 aa11.27□□□□□ -0.61
CDC42-203ENST00000400259 K7EQD1 137 aa11.26□□□□□ -0.61
CDC42-203ENST00000400259 PF4P02776 101 aa11.26□□□□□ -0.61
CDC42-203ENST00000400259 TIMM21Q9BVV7 248 aa11.26□□□□□ -0.61
CDC42-203ENST00000400259 SPANXB1Q9NS25 103 aaPredicted RBP11.26□□□□□ -0.61
CDC42-203ENST00000400259 OVOL2Q9BRP0 275 aa11.26□□□□□ -0.61
CDC42-203ENST00000400259 HECTD1Q9ULT8 2610 aa11.26□□□□□ -0.61
CDC42-203ENST00000400259 IGHV3-38A0A0C4DH36 116 aa11.25□□□□□ -0.61
CDC42-203ENST00000400259 FABP2P12104 132 aa11.25□□□□□ -0.61
CDC42-203ENST00000400259 LGALS3P17931 250 aaKnown RBP11.25□□□□□ -0.61
CDC42-203ENST00000400259 CEMP1Q6PRD7 247 aaPredicted RBP11.25□□□□□ -0.61
CDC42-203ENST00000400259 NOP10Q9NPE3 64 aaKnown RBP11.25□□□□□ -0.61
CDC42-203ENST00000400259 JMJD1CQ15652 2540 aa11.25□□□□□ -0.61
CDC42-203ENST00000400259 IGLL5B9A064 214 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms