RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 CFC1BP0CG36 223 aa5.89□□□□□ -1.47
USP47-203ENST00000399455 CFC1P0CG37 223 aa5.89□□□□□ -1.47
USP47-203ENST00000399455 C19orf71A6NCJ1 209 aa5.89□□□□□ -1.47
USP47-203ENST00000399455 HIST2H2BDQ6DRA6 164 aa5.89□□□□□ -1.47
USP47-203ENST00000399455 GPR179Q6PRD1 2367 aa5.89□□□□□ -1.47
USP47-203ENST00000399455 TMEM256-PLSCR3K7ERE1 68 aa5.89□□□□□ -1.47
USP47-203ENST00000399455 MIR7-3HGQ8N6C7 128 aa5.89□□□□□ -1.47
USP47-203ENST00000399455 C9orf85Q96MD7 179 aa5.89□□□□□ -1.47
USP47-203ENST00000399455 PDE6GP18545 87 aa5.89□□□□□ -1.47
USP47-203ENST00000399455 MED13Q9UHV7 2174 aa5.89□□□□□ -1.47
USP47-203ENST00000399455 AVPP01185 164 aa5.88□□□□□ -1.47
USP47-203ENST00000399455 CRYBA4P53673 196 aa5.88□□□□□ -1.47
USP47-203ENST00000399455 AKAP6Q13023 2319 aa5.88□□□□□ -1.47
USP47-203ENST00000399455 POLEQ07864 2286 aa5.88□□□□□ -1.47
USP47-203ENST00000399455 JMJD7-PLA2G4BH0Y9G9 81 aa5.88□□□□□ -1.47
USP47-203ENST00000399455 WFDC10AQ9H1F0 79 aa5.88□□□□□ -1.47
USP47-203ENST00000399455 MRGPRG-AS1Q2M3A8 158 aa5.88□□□□□ -1.47
USP47-203ENST00000399455 RETNQ9HD89 108 aa5.88□□□□□ -1.47
USP47-203ENST00000399455 PKDREJQ9NTG1 2253 aa5.88□□□□□ -1.47
USP47-203ENST00000399455 SPATA12Q7Z6I5 190 aa5.88□□□□□ -1.47
USP47-203ENST00000399455 SS18L2Q9UHA2 77 aa5.88□□□□□ -1.47
USP47-203ENST00000399455 HIVEP2P31629 2446 aa5.88□□□□□ -1.47
USP47-203ENST00000399455 PCNX3Q9H6A9 2034 aa5.88□□□□□ -1.47
USP47-203ENST00000399455 ZFHX2Q9C0A1 2572 aaPredicted RBP5.88□□□□□ -1.47
USP47-203ENST00000399455 PLAC8L1A1L4L8 177 aa5.88□□□□□ -1.47
USP47-203ENST00000399455 RPL28P46779 137 aaKnown RBP5.88□□□□□ -1.47
USP47-203ENST00000399455 CHCHD7Q9BUK0 85 aa5.88□□□□□ -1.47
USP47-203ENST00000399455 NAA38Q9BRA0 125 aaKnown RBP5.87□□□□□ -1.47
USP47-203ENST00000399455 LINC00467Q9BRT7 94 aa5.87□□□□□ -1.47
USP47-203ENST00000399455 UBE2D2P62837 147 aa5.87□□□□□ -1.47
USP47-203ENST00000399455 MUSTN1Q8IVN3 82 aa5.87□□□□□ -1.47
USP47-203ENST00000399455 C9orf118A6NHY6 69 aa5.87□□□□□ -1.47
USP47-203ENST00000399455 LECT2O14960 151 aa5.87□□□□□ -1.47
USP47-203ENST00000399455 CD164L2Q6UWJ8 174 aa5.87□□□□□ -1.47
USP47-203ENST00000399455 A0A1B0GX51 115 aa5.87□□□□□ -1.47
USP47-203ENST00000399455 CRIP2P52943 208 aaPredicted RBP5.87□□□□□ -1.47
USP47-203ENST00000399455 PPDPFLQ8WWR9 84 aa5.87□□□□□ -1.47
USP47-203ENST00000399455 GDF5OSQ5U4N7 250 aa5.86□□□□□ -1.47
USP47-203ENST00000399455 ACYP1P07311 99 aa5.86□□□□□ -1.47
USP47-203ENST00000399455 DHRS4-AS1Q9P1J3 65 aa5.86□□□□□ -1.47
USP47-203ENST00000399455 F8W1H4 67 aa5.86□□□□□ -1.47
USP47-203ENST00000399455 RBM3P98179 157 aaKnown RBP5.86□□□□□ -1.47
USP47-203ENST00000399455 SPANXB1Q9NS25 103 aaPredicted RBP5.86□□□□□ -1.47
USP47-203ENST00000399455 G3V4G9 280 aa5.86□□□□□ -1.47
USP47-203ENST00000399455 COL4A2P08572 1712 aa5.86□□□□□ -1.47
USP47-203ENST00000399455 F8WDY8 70 aa5.86□□□□□ -1.47
USP47-203ENST00000399455 P0C879 139 aa5.86□□□□□ -1.47
USP47-203ENST00000399455 PIK3CD-AS1Q5SR53 167 aa5.86□□□□□ -1.47
USP47-203ENST00000399455 Q6ZS46 218 aa5.86□□□□□ -1.47
USP47-203ENST00000399455 UPK3BQ9BT76 320 aa5.86□□□□□ -1.47
USP47-203ENST00000399455 BRI3O95415 125 aa5.85□□□□□ -1.47
USP47-203ENST00000399455 TCL1BO95988 128 aa5.85□□□□□ -1.47
USP47-203ENST00000399455 EIF4EBP1Q13541 118 aaPredicted RBP5.85□□□□□ -1.47
USP47-203ENST00000399455 TRBV10-2A0A0K0K1G8 114 aa5.85□□□□□ -1.47
USP47-203ENST00000399455 NACAE9PAV3 2078 aa5.85□□□□□ -1.47
USP47-203ENST00000399455 IGLC3P0DOY3 106 aa5.85□□□□□ -1.47
USP47-203ENST00000399455 CASC2Q6XLA1 102 aa5.85□□□□□ -1.47
USP47-203ENST00000399455 IBA57-AS1B1ANH7 110 aa5.84□□□□□ -1.47
USP47-203ENST00000399455 ADCYAP1P18509 176 aa5.84□□□□□ -1.47
USP47-203ENST00000399455 C12orf74Q32Q52 190 aa5.84□□□□□ -1.47
USP47-203ENST00000399455 MUC7Q8TAX7 377 aa5.84□□□□□ -1.47
USP47-203ENST00000399455 E9PLD3 99 aa5.84□□□□□ -1.47
USP47-203ENST00000399455 M0R378 163 aa5.84□□□□□ -1.47
USP47-203ENST00000399455 FHL3Q13643 280 aa5.84□□□□□ -1.48
USP47-203ENST00000399455 DCANP1Q8TF63 244 aa5.84□□□□□ -1.48
USP47-203ENST00000399455 IGKV4-1P06312 121 aa5.83□□□□□ -1.48
USP47-203ENST00000399455 COX17Q14061 63 aa5.83□□□□□ -1.48
USP47-203ENST00000399455 PCP2Q8IVA1 136 aa5.83□□□□□ -1.48
USP47-203ENST00000399455 RBX1P62877 108 aa5.83□□□□□ -1.48
USP47-203ENST00000399455 DAND5Q8N907 189 aa5.83□□□□□ -1.48
USP47-203ENST00000399455 SPANXCQ9NY87 97 aa5.83□□□□□ -1.48
USP47-203ENST00000399455 FAM229AH3BQW9 127 aa5.83□□□□□ -1.48
USP47-203ENST00000399455 C1orf229Q6ZS94 237 aaPredicted RBP5.83□□□□□ -1.48
USP47-203ENST00000399455 C10orf91Q5T1B1 145 aa5.82□□□□□ -1.48
USP47-203ENST00000399455 TET2Q6N021 2002 aaPredicted RBP5.82□□□□□ -1.48
USP47-203ENST00000399455 WWC2-AS2Q96NR7 200 aa5.82□□□□□ -1.48
USP47-203ENST00000399455 M0QY20 66 aa5.82□□□□□ -1.48
USP47-203ENST00000399455 ZNF80P51504 273 aaPredicted RBP5.82□□□□□ -1.48
USP47-203ENST00000399455 CEMP1Q6PRD7 247 aaPredicted RBP5.82□□□□□ -1.48
USP47-203ENST00000399455 Q6ZTC4 211 aa5.82□□□□□ -1.48
USP47-203ENST00000399455 PCNX1Q96RV3 2341 aa5.82□□□□□ -1.48
USP47-203ENST00000399455 TRAV23DV6A0A075B6W5 121 aa5.82□□□□□ -1.48
USP47-203ENST00000399455 GVINP1Q7Z2Y8 2422 aa5.81□□□□□ -1.48
USP47-203ENST00000399455 CADP27708 2225 aa5.81□□□□□ -1.48
USP47-203ENST00000399455 TRBV30A0A0K0K1B3 111 aa5.81□□□□□ -1.48
USP47-203ENST00000399455 A0A1W2PPM0 123 aa5.81□□□□□ -1.48
USP47-203ENST00000399455 NCOA6Q14686 2063 aaPredicted RBP5.81□□□□□ -1.48
USP47-203ENST00000399455 PROK1P58294 105 aa5.81□□□□□ -1.48
USP47-203ENST00000399455 Q8N2B8 174 aa5.81□□□□□ -1.48
USP47-203ENST00000399455 KLLNB2CW77 178 aa5.81□□□□□ -1.48
USP47-203ENST00000399455 C14orf132Q9NPU4 83 aa5.81□□□□□ -1.48
USP47-203ENST00000399455 IGLC6P0CF74 106 aa5.81□□□□□ -1.48
USP47-203ENST00000399455 CACNA1HO95180 2353 aa5.8□□□□□ -1.48
USP47-203ENST00000399455 K7EP13 123 aa5.8□□□□□ -1.48
USP47-203ENST00000399455 DOCK11Q5JSL3 2073 aa5.8□□□□□ -1.48
USP47-203ENST00000399455 K7EP34 96 aa5.8□□□□□ -1.48
USP47-203ENST00000399455 K7ERJ3 54 aa5.8□□□□□ -1.48
USP47-203ENST00000399455 KRTAP24-1Q3LI83 254 aa5.8□□□□□ -1.48
USP47-203ENST00000399455 A0A096LNI7 61 aa5.8□□□□□ -1.48
USP47-203ENST00000399455 LINC00959A0A1B0GUT2 108 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms