RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 NPPCP23582 126 aa4.6□□□□□ -1.67
SMCO1-201ENST00000397537 KISS1Q15726 138 aa4.6□□□□□ -1.67
SMCO1-201ENST00000397537 TMEM170BQ5T4T1 132 aa4.6□□□□□ -1.67
SMCO1-201ENST00000397537 ODF3Q96PU9 254 aa4.6□□□□□ -1.67
SMCO1-201ENST00000397537 MAP1AP78559 2803 aaPredicted RBP4.6□□□□□ -1.67
SMCO1-201ENST00000397537 KIF26BQ2KJY2 2108 aa4.6□□□□□ -1.67
SMCO1-201ENST00000397537 MED12LQ86YW9 2145 aa4.6□□□□□ -1.67
SMCO1-201ENST00000397537 TRBV27A0A0K0K1C4 114 aa4.6□□□□□ -1.67
SMCO1-201ENST00000397537 hADV29S1A0JD25 119 aa4.6□□□□□ -1.67
SMCO1-201ENST00000397537 F2Z2F3 143 aa4.6□□□□□ -1.67
SMCO1-201ENST00000397537 J3QRE1 110 aa4.6□□□□□ -1.67
SMCO1-201ENST00000397537 IL4P05112 153 aa4.6□□□□□ -1.67
SMCO1-201ENST00000397537 DSCR4P56555 118 aaPredicted RBP4.6□□□□□ -1.67
SMCO1-201ENST00000397537 C10orf105Q8TEF2 133 aa4.6□□□□□ -1.67
SMCO1-201ENST00000397537 C11orf1Q9H5F2 150 aa4.6□□□□□ -1.67
SMCO1-201ENST00000397537 NXT2Q9NPJ8 142 aaKnown RBP4.6□□□□□ -1.67
SMCO1-201ENST00000397537 LINC00588Q9Y4M8 146 aa4.6□□□□□ -1.67
SMCO1-201ENST00000397537 LY96Q9Y6Y9 160 aa4.6□□□□□ -1.67
SMCO1-201ENST00000397537 SHANK1Q9Y566 2161 aa4.6□□□□□ -1.67
SMCO1-201ENST00000397537 DSCAMO60469 2012 aa4.59□□□□□ -1.67
SMCO1-201ENST00000397537 UBE2L5PA0A1B0GUS4 154 aa4.59□□□□□ -1.67
SMCO1-201ENST00000397537 IGHV4-34P06331 123 aa4.59□□□□□ -1.67
SMCO1-201ENST00000397537 CCL3P10147 92 aa4.59□□□□□ -1.67
SMCO1-201ENST00000397537 RPL18Q07020 188 aaKnown RBP4.59□□□□□ -1.67
SMCO1-201ENST00000397537 FAM19A2Q8N3H0 131 aa4.59□□□□□ -1.67
SMCO1-201ENST00000397537 NHP2Q9NX24 153 aaKnown RBP4.59□□□□□ -1.67
SMCO1-201ENST00000397537 NSD1Q96L73 2696 aaPredicted RBP4.59□□□□□ -1.67
SMCO1-201ENST00000397537 DOCK9Q9BZ29 2069 aa4.58□□□□□ -1.68
SMCO1-201ENST00000397537 A8MWP4 228 aa4.58□□□□□ -1.68
SMCO1-201ENST00000397537 IGLV3-19P01714 112 aa4.58□□□□□ -1.68
SMCO1-201ENST00000397537 GCHFRP30047 84 aa4.58□□□□□ -1.68
SMCO1-201ENST00000397537 SERF2P84101 59 aa4.58□□□□□ -1.68
SMCO1-201ENST00000397537 SYCNQ0VAF6 134 aa4.58□□□□□ -1.68
SMCO1-201ENST00000397537 FP248Q71RG6 208 aaPredicted RBP4.58□□□□□ -1.68
SMCO1-201ENST00000397537 SERP2Q8N6R1 65 aa4.58□□□□□ -1.68
SMCO1-201ENST00000397537 EPDR1Q9UM22 224 aa4.58□□□□□ -1.68
SMCO1-201ENST00000397537 MYOFQ9NZM1 2061 aa4.58□□□□□ -1.68
SMCO1-201ENST00000397537 OBSL1O75147 1896 aa4.58□□□□□ -1.68
SMCO1-201ENST00000397537 COL27A1Q8IZC6 1860 aaPredicted RBP4.58□□□□□ -1.68
SMCO1-201ENST00000397537 ANKRD12Q6UB98 2062 aa4.58□□□□□ -1.68
SMCO1-201ENST00000397537 K7ERS5 55 aa4.58□□□□□ -1.68
SMCO1-201ENST00000397537 C16orf47Q6ZP98 133 aaPredicted RBP4.58□□□□□ -1.68
SMCO1-201ENST00000397537 TRGV9Q99603 122 aa4.58□□□□□ -1.68
SMCO1-201ENST00000397537 NUMA1Q14980 2115 aa4.57□□□□□ -1.68
SMCO1-201ENST00000397537 TCRBV4S1A1TA0A5B7 111 aa4.57□□□□□ -1.68
SMCO1-201ENST00000397537 IGKV1D-33P01593 117 aa4.57□□□□□ -1.68
SMCO1-201ENST00000397537 IGKV1-33P01594 117 aa4.57□□□□□ -1.68
SMCO1-201ENST00000397537 TRGV3P03979 118 aa4.57□□□□□ -1.68
SMCO1-201ENST00000397537 CXCL8P10145 99 aa4.57□□□□□ -1.68
SMCO1-201ENST00000397537 RPL27AP46776 148 aaKnown RBP4.57□□□□□ -1.68
SMCO1-201ENST00000397537 OPRPNQ99935 248 aaPredicted RBP4.57□□□□□ -1.68
SMCO1-201ENST00000397537 MXRA5Q9NR99 2828 aa4.57□□□□□ -1.68
SMCO1-201ENST00000397537 ZNF469Q96JG9 3925 aaPredicted RBP4.57□□□□□ -1.68
SMCO1-201ENST00000397537 FLNAP21333 2647 aaKnown RBP4.56□□□□□ -1.68
SMCO1-201ENST00000397537 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
SMCO1-201ENST00000397537 CFC1P0CG37 223 aa4.56□□□□□ -1.68
SMCO1-201ENST00000397537 IGHV3-30-3P0DP02 117 aa4.56□□□□□ -1.68
SMCO1-201ENST00000397537 HMGA1P17096 107 aaKnown RBP4.56□□□□□ -1.68
SMCO1-201ENST00000397537 PEBP1P30086 187 aaKnown RBP4.56□□□□□ -1.68
SMCO1-201ENST00000397537 FXYD2P54710 66 aa4.56□□□□□ -1.68
SMCO1-201ENST00000397537 PCBD1P61457 104 aa4.56□□□□□ -1.68
SMCO1-201ENST00000397537 HIST1H4AP62805 103 aaKnown RBP4.56□□□□□ -1.68
SMCO1-201ENST00000397537 LINC00643Q86TS7 51 aa4.56□□□□□ -1.68
SMCO1-201ENST00000397537 MORN4Q8NDC4 146 aa4.56□□□□□ -1.68
SMCO1-201ENST00000397537 NPCDR1Q9BY65 106 aa4.56□□□□□ -1.68
SMCO1-201ENST00000397537 ANKRD36A6QL64 1941 aa4.56□□□□□ -1.68
SMCO1-201ENST00000397537 A6NED7 52 aa4.56□□□□□ -1.68
SMCO1-201ENST00000397537 NPYP01303 97 aa4.56□□□□□ -1.68
SMCO1-201ENST00000397537 ZFP2Q6ZN57 461 aa4.56□□□□□ -1.68
SMCO1-201ENST00000397537 UPK3BQ9BT76 320 aa4.56□□□□□ -1.68
SMCO1-201ENST00000397537 OSTCQ9NRP0 149 aa4.56□□□□□ -1.68
SMCO1-201ENST00000397537 TGP01266 2768 aa4.55□□□□□ -1.68
SMCO1-201ENST00000397537 PKDREJQ9NTG1 2253 aa4.55□□□□□ -1.68
SMCO1-201ENST00000397537 IGHV3-64DA0A0J9YX35 117 aa4.55□□□□□ -1.68
SMCO1-201ENST00000397537 C11orf94C9JXX5 98 aa4.55□□□□□ -1.68
SMCO1-201ENST00000397537 FXYD6P3P58550 94 aa4.55□□□□□ -1.68
SMCO1-201ENST00000397537 RPL38P63173 70 aaKnown RBP4.55□□□□□ -1.68
SMCO1-201ENST00000397537 ZNF816Q0VGE8 651 aaPredicted RBP4.55□□□□□ -1.68
SMCO1-201ENST00000397537 C9orf129Q5T035 196 aaKnown RBP4.55□□□□□ -1.68
SMCO1-201ENST00000397537 Q8N2B8 174 aa4.55□□□□□ -1.68
SMCO1-201ENST00000397537 PLXNA2O75051 1894 aa4.55□□□□□ -1.68
SMCO1-201ENST00000397537 DIDO1Q9BTC0 2240 aaKnown RBP4.54□□□□□ -1.68
SMCO1-201ENST00000397537 POLEQ07864 2286 aa4.54□□□□□ -1.68
SMCO1-201ENST00000397537 PIGBOS1A0A0B4J2F0 54 aa4.54□□□□□ -1.68
SMCO1-201ENST00000397537 IGKV3D-20A0A0C4DH25 116 aa4.54□□□□□ -1.68
SMCO1-201ENST00000397537 IGHV1-3A0A0C4DH29 117 aa4.54□□□□□ -1.68
SMCO1-201ENST00000397537 MYMXA0A1B0GTQ4 84 aa4.54□□□□□ -1.68
SMCO1-201ENST00000397537 WISP3O95389 354 aaPredicted RBP4.54□□□□□ -1.68
SMCO1-201ENST00000397537 UBE2D3P61077 147 aa4.54□□□□□ -1.68
SMCO1-201ENST00000397537 UBE2D2P62837 147 aa4.54□□□□□ -1.68
SMCO1-201ENST00000397537 ZNF56Q15929 161 aa4.54□□□□□ -1.68
SMCO1-201ENST00000397537 RPS27LQ71UM5 84 aaKnown RBP4.54□□□□□ -1.68
SMCO1-201ENST00000397537 NBEAL2Q6ZNJ1 2754 aa4.54□□□□□ -1.68
SMCO1-201ENST00000397537 ANAPC1Q9H1A4 1944 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 H3BMM0 161 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 J3QLW9 94 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 SLC25A20O43772 301 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 TMEM155Q4W5P6 130 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 MIC13Q5XKP0 118 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 MIR17HGQ75NE6 70 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms