RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 SNRPEP62304 92 aaKnown RBP11.79□□□□□ -0.52
TSPAN4-205ENST00000397406 PHLDA1Q8WV24 401 aaPredicted RBP11.79□□□□□ -0.52
TSPAN4-205ENST00000397406 AP5S1Q9NUS5 200 aa11.79□□□□□ -0.52
TSPAN4-205ENST00000397406 IGHV3-38A0A0C4DH36 116 aa11.78□□□□□ -0.52
TSPAN4-205ENST00000397406 C5orf52A6NGY3 159 aa11.78□□□□□ -0.52
TSPAN4-205ENST00000397406 H3BNG1 76 aa11.78□□□□□ -0.52
TSPAN4-205ENST00000397406 TCAPO15273 167 aa11.78□□□□□ -0.52
TSPAN4-205ENST00000397406 TSHBP01222 138 aa11.78□□□□□ -0.52
TSPAN4-205ENST00000397406 ALMS1Q8TCU4 4167 aa11.78□□□□□ -0.52
TSPAN4-205ENST00000397406 K7EMI3 77 aa11.77□□□□□ -0.52
TSPAN4-205ENST00000397406 DAZ4Q86SG3 579 aaKnown RBP11.77□□□□□ -0.52
TSPAN4-205ENST00000397406 DEFB104AQ8WTQ1 72 aa11.77□□□□□ -0.52
TSPAN4-205ENST00000397406 KIR2DL4Q99706 377 aa11.77□□□□□ -0.52
TSPAN4-205ENST00000397406 DAZ3Q9NR90 486 aaKnown RBP11.77□□□□□ -0.52
TSPAN4-205ENST00000397406 A0A096LPF7 62 aa11.76□□□□□ -0.53
TSPAN4-205ENST00000397406 HSBP1O75506 76 aa11.76□□□□□ -0.53
TSPAN4-205ENST00000397406 LAGE3Q14657 143 aa11.76□□□□□ -0.53
TSPAN4-205ENST00000397406 HIST3H2BBQ8N257 126 aa11.76□□□□□ -0.53
TSPAN4-205ENST00000397406 ICOSQ9Y6W8 199 aa11.76□□□□□ -0.53
TSPAN4-205ENST00000397406 A0A096LNJ9 63 aa11.75□□□□□ -0.53
TSPAN4-205ENST00000397406 IGHV1-24A0A0C4DH33 117 aa11.75□□□□□ -0.53
TSPAN4-205ENST00000397406 MRPL23Q16540 153 aaKnown RBP11.75□□□□□ -0.53
TSPAN4-205ENST00000397406 ATP6V0E2Q8NHE4 81 aa11.75□□□□□ -0.53
TSPAN4-205ENST00000397406 FCER1GP30273 86 aa11.74□□□□□ -0.53
TSPAN4-205ENST00000397406 COTL1Q14019 142 aa11.74□□□□□ -0.53
TSPAN4-205ENST00000397406 PMCHL1Q16048 86 aa11.74□□□□□ -0.53
TSPAN4-205ENST00000397406 ORMDL2Q53FV1 153 aa11.74□□□□□ -0.53
TSPAN4-205ENST00000397406 PDZD11Q5EBL8 140 aa11.74□□□□□ -0.53
TSPAN4-205ENST00000397406 NTM-AS1Q6ZSK4 140 aa11.74□□□□□ -0.53
TSPAN4-205ENST00000397406 FAM19A2Q8N3H0 131 aa11.74□□□□□ -0.53
TSPAN4-205ENST00000397406 GTSF1LQ9H1H1 148 aa11.73□□□□□ -0.53
TSPAN4-205ENST00000397406 SH2D6Q7Z4S9 175 aa11.72□□□□□ -0.53
TSPAN4-205ENST00000397406 IFITM10A6NMD0 228 aa11.71□□□□□ -0.53
TSPAN4-205ENST00000397406 NUDT3O95989 172 aa11.71□□□□□ -0.53
TSPAN4-205ENST00000397406 AMTP48728 403 aa11.71□□□□□ -0.53
TSPAN4-205ENST00000397406 CHCHD7Q9BUK0 85 aa11.71□□□□□ -0.53
TSPAN4-205ENST00000397406 BIRC6Q9NR09 4857 aa11.71□□□□□ -0.54
TSPAN4-205ENST00000397406 HBDP02042 147 aa11.7□□□□□ -0.54
TSPAN4-205ENST00000397406 TMEM97Q5BJF2 176 aa11.69□□□□□ -0.54
TSPAN4-205ENST00000397406 C15orf53Q8NAA6 179 aa11.69□□□□□ -0.54
TSPAN4-205ENST00000397406 C20orf203Q8NBC4 194 aa11.69□□□□□ -0.54
TSPAN4-205ENST00000397406 HIST1H2BLQ99880 126 aa11.69□□□□□ -0.54
TSPAN4-205ENST00000397406 TRBV6-8A0A0A6YYG3 113 aa11.69□□□□□ -0.54
TSPAN4-205ENST00000397406 BTF3P20290 206 aaKnown RBP11.69□□□□□ -0.54
TSPAN4-205ENST00000397406 C2orf66Q6UXQ4 117 aa11.69□□□□□ -0.54
TSPAN4-205ENST00000397406 TOMM6Q96B49 74 aa11.69□□□□□ -0.54
TSPAN4-205ENST00000397406 PACRGQ96M98 296 aaPredicted RBP11.69□□□□□ -0.54
TSPAN4-205ENST00000397406 TRBV25-1A0A075B6N4 114 aa11.68□□□□□ -0.54
TSPAN4-205ENST00000397406 IGLL5B9A064 214 aa11.68□□□□□ -0.54
TSPAN4-205ENST00000397406 S100A2P29034 98 aa11.68□□□□□ -0.54
TSPAN4-205ENST00000397406 RPL39P62891 51 aaKnown RBP11.68□□□□□ -0.54
TSPAN4-205ENST00000397406 CEMP1Q6PRD7 247 aaPredicted RBP11.68□□□□□ -0.54
TSPAN4-205ENST00000397406 TMEM18Q96B42 140 aa11.68□□□□□ -0.54
TSPAN4-205ENST00000397406 FABP4P15090 132 aa11.67□□□□□ -0.54
TSPAN4-205ENST00000397406 G0S2P27469 103 aa11.67□□□□□ -0.54
TSPAN4-205ENST00000397406 LYPD5Q6UWN5 251 aa11.67□□□□□ -0.54
TSPAN4-205ENST00000397406 CYSLTR1Q9Y271 337 aa11.67□□□□□ -0.54
TSPAN4-205ENST00000397406 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.66□□□□□ -0.54
TSPAN4-205ENST00000397406 IGKV2-29A2NJV5 120 aaPredicted RBP11.66□□□□□ -0.54
TSPAN4-205ENST00000397406 TIRAPP58753 221 aa11.66□□□□□ -0.54
TSPAN4-205ENST00000397406 LINC00173Q6ZV60 143 aa11.66□□□□□ -0.54
TSPAN4-205ENST00000397406 LINC00476Q8WZB0 136 aa11.66□□□□□ -0.54
TSPAN4-205ENST00000397406 TMEM243Q9BU79 118 aa11.66□□□□□ -0.54
TSPAN4-205ENST00000397406 KMT2AQ03164 3969 aa11.65□□□□□ -0.54
TSPAN4-205ENST00000397406 NUPR2A6NF83 97 aa11.65□□□□□ -0.54
TSPAN4-205ENST00000397406 LEPROTL1O95214 131 aa11.65□□□□□ -0.54
TSPAN4-205ENST00000397406 LINC01549A6NIU2 74 aa11.64□□□□□ -0.55
TSPAN4-205ENST00000397406 LELP1Q5T871 98 aa11.64□□□□□ -0.55
TSPAN4-205ENST00000397406 ESRGQ1W209 222 aa11.63□□□□□ -0.55
TSPAN4-205ENST00000397406 IGIPA6NJ69 53 aa11.62□□□□□ -0.55
TSPAN4-205ENST00000397406 H7C423 109 aa11.62□□□□□ -0.55
TSPAN4-205ENST00000397406 ERASQ7Z444 233 aa11.62□□□□□ -0.55
TSPAN4-205ENST00000397406 SCGB3A1Q96QR1 104 aa11.62□□□□□ -0.55
TSPAN4-205ENST00000397406 APLNQ9ULZ1 77 aa11.62□□□□□ -0.55
TSPAN4-205ENST00000397406 UBE2D4Q9Y2X8 147 aa11.62□□□□□ -0.55
TSPAN4-205ENST00000397406 LOC105371267A0A1B0GV96 52 aa11.61□□□□□ -0.55
TSPAN4-205ENST00000397406 MRPL52Q86TS9 123 aaKnown RBP11.61□□□□□ -0.55
TSPAN4-205ENST00000397406 CHCHD5Q9BSY4 110 aa11.61□□□□□ -0.55
TSPAN4-205ENST00000397406 TIMM21Q9BVV7 248 aa11.61□□□□□ -0.55
TSPAN4-205ENST00000397406 HSPB8Q9UJY1 196 aa11.61□□□□□ -0.55
TSPAN4-205ENST00000397406 KLK5Q9Y337 293 aaPredicted RBP11.61□□□□□ -0.55
TSPAN4-205ENST00000397406 PYGO1Q9Y3Y4 419 aa11.61□□□□□ -0.55
TSPAN4-205ENST00000397406 ATP5LO75964 103 aa11.6□□□□□ -0.55
TSPAN4-205ENST00000397406 IFI27L1Q96BM0 104 aa11.6□□□□□ -0.55
TSPAN4-205ENST00000397406 TIMM17AQ99595 171 aa11.6□□□□□ -0.55
TSPAN4-205ENST00000397406 UBE2L6O14933 153 aa11.6□□□□□ -0.55
TSPAN4-205ENST00000397406 FGF6P10767 208 aa11.6□□□□□ -0.55
TSPAN4-205ENST00000397406 GAGE6Q13070 117 aa11.6□□□□□ -0.55
TSPAN4-205ENST00000397406 FAM104AQ969W3 186 aa11.6□□□□□ -0.55
TSPAN4-205ENST00000397406 SPANXA1Q9NS26 97 aa11.6□□□□□ -0.55
TSPAN4-205ENST00000397406 VPS13DQ5THJ4 4388 aa11.59□□□□□ -0.55
TSPAN4-205ENST00000397406 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.59□□□□□ -0.55
TSPAN4-205ENST00000397406 LY6G6CO95867 125 aa11.59□□□□□ -0.55
TSPAN4-205ENST00000397406 OR10D4PQ8NGN7 298 aa11.59□□□□□ -0.55
TSPAN4-205ENST00000397406 TMEM141Q96I45 108 aa11.59□□□□□ -0.55
TSPAN4-205ENST00000397406 CSDC2Q9Y534 153 aaKnown RBP11.59□□□□□ -0.55
TSPAN4-205ENST00000397406 IGLV4-3A0A075B6K6 122 aa11.58□□□□□ -0.56
TSPAN4-205ENST00000397406 C3orf79P0CE67 100 aa11.58□□□□□ -0.56
TSPAN4-205ENST00000397406 OPRPNQ99935 248 aaPredicted RBP11.58□□□□□ -0.56
TSPAN4-205ENST00000397406 NPSP0C0P6 89 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms