RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 TEX15Q9BXT5 2789 aa10.16□□□□□ -0.78
NUP98-204ENST00000397004 RBMY1BA6NDE4 496 aaKnown RBP10.16□□□□□ -0.78
NUP98-204ENST00000397004 RBMY1EA6NEQ0 496 aaKnown RBP10.16□□□□□ -0.78
NUP98-204ENST00000397004 RBMY1DP0C7P1 496 aaKnown RBP10.16□□□□□ -0.78
NUP98-204ENST00000397004 BEX4Q9NWD9 120 aaPredicted RBP10.16□□□□□ -0.78
NUP98-204ENST00000397004 NF1P21359 2839 aa10.16□□□□□ -0.78
NUP98-204ENST00000397004 HTN1P15515 57 aa10.15□□□□□ -0.78
NUP98-204ENST00000397004 ERG28Q9UKR5 140 aa10.15□□□□□ -0.78
NUP98-204ENST00000397004 USP24Q9UPU5 2620 aa10.15□□□□□ -0.78
NUP98-204ENST00000397004 NPC2P61916 151 aa10.15□□□□□ -0.78
NUP98-204ENST00000397004 MRPS36P82909 103 aaKnown RBP10.15□□□□□ -0.78
NUP98-204ENST00000397004 NTN5Q8WTR8 489 aaPredicted RBP10.15□□□□□ -0.78
NUP98-204ENST00000397004 ODF3Q96PU9 254 aa10.15□□□□□ -0.78
NUP98-204ENST00000397004 TRAV4A0A0B4J268 109 aa10.15□□□□□ -0.78
NUP98-204ENST00000397004 C18orf65Q6ZTR6 163 aa10.15□□□□□ -0.78
NUP98-204ENST00000397004 CHD6Q8TD26 2715 aa10.15□□□□□ -0.79
NUP98-204ENST00000397004 MSMBP08118 114 aa10.14□□□□□ -0.79
NUP98-204ENST00000397004 DEFB112Q30KQ8 113 aa10.14□□□□□ -0.79
NUP98-204ENST00000397004 BBC3Q96PG8 261 aaPredicted RBP10.14□□□□□ -0.79
NUP98-204ENST00000397004 PIMREGQ9BSJ6 248 aa10.14□□□□□ -0.79
NUP98-204ENST00000397004 CHCHD7Q9BUK0 85 aa10.14□□□□□ -0.79
NUP98-204ENST00000397004 LINC01620Q4KN68 170 aa10.13□□□□□ -0.79
NUP98-204ENST00000397004 LYRM7Q5U5X0 104 aa10.13□□□□□ -0.79
NUP98-204ENST00000397004 DAND5Q8N907 189 aa10.13□□□□□ -0.79
NUP98-204ENST00000397004 DOPEY1Q5JWR5 2465 aa10.12□□□□□ -0.79
NUP98-204ENST00000397004 CD28P10747 220 aa10.12□□□□□ -0.79
NUP98-204ENST00000397004 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.12□□□□□ -0.79
NUP98-204ENST00000397004 IGKV2-29A2NJV5 120 aaPredicted RBP10.12□□□□□ -0.79
NUP98-204ENST00000397004 M0QXV9 152 aa10.11□□□□□ -0.79
NUP98-204ENST00000397004 RNF152Q8N8N0 203 aa10.11□□□□□ -0.79
NUP98-204ENST00000397004 TIMM21Q9BVV7 248 aa10.11□□□□□ -0.79
NUP98-204ENST00000397004 PYGO1Q9Y3Y4 419 aa10.11□□□□□ -0.79
NUP98-204ENST00000397004 H7C423 109 aa10.11□□□□□ -0.79
NUP98-204ENST00000397004 SNRPD3P62318 126 aaKnown RBP10.11□□□□□ -0.79
NUP98-204ENST00000397004 MAPK1IP1LQ8NDC0 245 aa10.11□□□□□ -0.79
NUP98-204ENST00000397004 CLEC2BQ92478 149 aa10.11□□□□□ -0.79
NUP98-204ENST00000397004 LINC01600Q96MT4 127 aa10.11□□□□□ -0.79
NUP98-204ENST00000397004 CCL19Q99731 98 aa10.11□□□□□ -0.79
NUP98-204ENST00000397004 UBE2D4Q9Y2X8 147 aa10.11□□□□□ -0.79
NUP98-204ENST00000397004 IGHV3-38A0A0C4DH36 116 aa10.1□□□□□ -0.79
NUP98-204ENST00000397004 TRBV30A0A0K0K1B3 111 aa10.1□□□□□ -0.79
NUP98-204ENST00000397004 PRSS2P07478 247 aa10.1□□□□□ -0.79
NUP98-204ENST00000397004 DEFB136Q30KP8 78 aa10.1□□□□□ -0.79
NUP98-204ENST00000397004 VSIG2Q96IQ7 327 aa10.1□□□□□ -0.79
NUP98-204ENST00000397004 IGHV1-58A0A0C4DH39 117 aa10.1□□□□□ -0.79
NUP98-204ENST00000397004 LINC00467Q9BRT7 94 aa10.1□□□□□ -0.79
NUP98-204ENST00000397004 HOXD3P31249 432 aaPredicted RBP10.09□□□□□ -0.79
NUP98-204ENST00000397004 ATP5J2P56134 94 aa10.09□□□□□ -0.79
NUP98-204ENST00000397004 MYO9AB2RTY4 2548 aa10.09□□□□□ -0.79
NUP98-204ENST00000397004 NDUFA12Q9UI09 145 aa10.09□□□□□ -0.79
NUP98-204ENST00000397004 PRB1P04280 392 aa10.08□□□□□ -0.8
NUP98-204ENST00000397004 COX6A2Q02221 97 aa10.08□□□□□ -0.8
NUP98-204ENST00000397004 Q1RN00 199 aa10.08□□□□□ -0.8
NUP98-204ENST00000397004 DUX3Q96PT4 197 aa10.08□□□□□ -0.8
NUP98-204ENST00000397004 EDA2RQ9HAV5 297 aa10.08□□□□□ -0.8
NUP98-204ENST00000397004 ANKRD17O75179 2603 aaKnown RBP10.08□□□□□ -0.8
NUP98-204ENST00000397004 ICOSQ9Y6W8 199 aa10.08□□□□□ -0.8
NUP98-204ENST00000397004 ATXN8Q156A1 80 aa10.07□□□□□ -0.8
NUP98-204ENST00000397004 MYO18BQ8IUG5 2567 aa10.07□□□□□ -0.8
NUP98-204ENST00000397004 TRBV10-2A0A0K0K1G8 114 aa10.07□□□□□ -0.8
NUP98-204ENST00000397004 NDUFA7O95182 113 aa10.07□□□□□ -0.8
NUP98-204ENST00000397004 CITED2Q99967 270 aaPredicted RBP10.07□□□□□ -0.8
NUP98-204ENST00000397004 CDKN2A-AS1Q9UH64 79 aa10.07□□□□□ -0.8
NUP98-204ENST00000397004 RPL13AP40429 203 aaKnown RBP10.07□□□□□ -0.8
NUP98-204ENST00000397004 SPANXDQ9BXN6 97 aa10.07□□□□□ -0.8
NUP98-204ENST00000397004 SPANXCQ9NY87 97 aa10.07□□□□□ -0.8
NUP98-204ENST00000397004 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.06□□□□□ -0.8
NUP98-204ENST00000397004 SLURP1P55000 103 aa10.06□□□□□ -0.8
NUP98-204ENST00000397004 SETXQ7Z333 2677 aaKnown RBP10.06□□□□□ -0.8
NUP98-204ENST00000397004 UBR5O95071 2799 aaPredicted RBP10.06□□□□□ -0.8
NUP98-204ENST00000397004 DEFB131AP59861 70 aa10.06□□□□□ -0.8
NUP98-204ENST00000397004 MIAQ16674 131 aa10.06□□□□□ -0.8
NUP98-204ENST00000397004 ZNF843Q8N446 348 aa10.06□□□□□ -0.8
NUP98-204ENST00000397004 EPG5Q9HCE0 2579 aa10.06□□□□□ -0.8
NUP98-204ENST00000397004 ACACBO00763 2458 aa10.06□□□□□ -0.8
NUP98-204ENST00000397004 ZFAND6Q6FIF0 208 aa10.06□□□□□ -0.8
NUP98-204ENST00000397004 C11orf72Q8NBR9 251 aa10.06□□□□□ -0.8
NUP98-204ENST00000397004 H3BMM0 161 aa10.05□□□□□ -0.8
NUP98-204ENST00000397004 TMEM61Q8N0U2 210 aa10.05□□□□□ -0.8
NUP98-204ENST00000397004 C2CD3Q4AC94 2353 aa10.05□□□□□ -0.8
NUP98-204ENST00000397004 TINCRA0A1B0GVN0 87 aa10.05□□□□□ -0.8
NUP98-204ENST00000397004 ANAPC13Q9BS18 74 aa10.05□□□□□ -0.8
NUP98-204ENST00000397004 A0A096LNT2 108 aa10.04□□□□□ -0.8
NUP98-204ENST00000397004 TRGV11A0A075B6L2 103 aa10.04□□□□□ -0.8
NUP98-204ENST00000397004 A8MTW9 85 aa10.04□□□□□ -0.8
NUP98-204ENST00000397004 TMEM262E9PQX1 116 aa10.04□□□□□ -0.8
NUP98-204ENST00000397004 TEX29Q8N6K0 151 aa10.04□□□□□ -0.8
NUP98-204ENST00000397004 ZNF702PQ9H963 129 aa10.04□□□□□ -0.8
NUP98-204ENST00000397004 TMEM101Q96IK0 257 aa10.03□□□□□ -0.8
NUP98-204ENST00000397004 SS18L2Q9UHA2 77 aa10.03□□□□□ -0.8
NUP98-204ENST00000397004 LINC00694P0DN24 101 aa10.03□□□□□ -0.8
NUP98-204ENST00000397004 Q8N2B8 174 aa10.03□□□□□ -0.8
NUP98-204ENST00000397004 SOSTDC1Q6X4U4 206 aa10.03□□□□□ -0.8
NUP98-204ENST00000397004 TNFRSF18Q9Y5U5 241 aa10.03□□□□□ -0.8
NUP98-204ENST00000397004 IGHV3OR16-12A0A075B7B8 117 aa10.02□□□□□ -0.8
NUP98-204ENST00000397004 B4DSR2 109 aa10.02□□□□□ -0.8
NUP98-204ENST00000397004 CCDC179H3BU77 68 aa10.02□□□□□ -0.8
NUP98-204ENST00000397004 NDUFV3P56181 108 aaKnown RBP10.02□□□□□ -0.8
NUP98-204ENST00000397004 TMEM89A2RUT3 159 aa10.02□□□□□ -0.81
NUP98-204ENST00000397004 ABCA12Q86UK0 2595 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms