RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 UBE2L6O14933 153 aa5.12□□□□□ -1.59
SCFD1-202ENST00000396629 H2AFB1P0C5Y9 115 aa5.12□□□□□ -1.59
SCFD1-202ENST00000396629 NKX2-5P52952 324 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-202ENST00000396629 FOXI1Q12951 378 aa5.12□□□□□ -1.59
SCFD1-202ENST00000396629 SUMO4Q6EEV6 95 aa5.12□□□□□ -1.59
SCFD1-202ENST00000396629 TCEAL7Q9BRU2 100 aa5.12□□□□□ -1.59
SCFD1-202ENST00000396629 KRTAP4-8Q9BYQ9 185 aa5.12□□□□□ -1.59
SCFD1-202ENST00000396629 H3BS24 57 aa5.11□□□□□ -1.59
SCFD1-202ENST00000396629 FHITP49789 147 aa5.11□□□□□ -1.59
SCFD1-202ENST00000396629 PTTG1IPP53801 180 aa5.11□□□□□ -1.59
SCFD1-202ENST00000396629 SSTP61278 116 aa5.11□□□□□ -1.59
SCFD1-202ENST00000396629 PRR4Q16378 134 aa5.11□□□□□ -1.59
SCFD1-202ENST00000396629 CARD19Q96LW7 228 aa5.11□□□□□ -1.59
SCFD1-202ENST00000396629 IGKV3OR2-268A0A0C4DH90 116 aa5.11□□□□□ -1.59
SCFD1-202ENST00000396629 A0A1W2PNN7 141 aa5.11□□□□□ -1.59
SCFD1-202ENST00000396629 SSNA1O43805 119 aa5.11□□□□□ -1.59
SCFD1-202ENST00000396629 MGPP08493 103 aa5.11□□□□□ -1.59
SCFD1-202ENST00000396629 AKR1C3P42330 323 aa5.11□□□□□ -1.59
SCFD1-202ENST00000396629 AMTP48728 403 aa5.11□□□□□ -1.59
SCFD1-202ENST00000396629 DEFA3P59666 94 aa5.11□□□□□ -1.59
SCFD1-202ENST00000396629 RASL11AQ6T310 242 aa5.11□□□□□ -1.59
SCFD1-202ENST00000396629 MLST8Q9BVC4 326 aa5.11□□□□□ -1.59
SCFD1-202ENST00000396629 MT-ND6P03923 174 aa5.1□□□□□ -1.59
SCFD1-202ENST00000396629 FER1L6-AS1Q8NA97 138 aa5.1□□□□□ -1.59
SCFD1-202ENST00000396629 DIRC1Q969H9 104 aa5.1□□□□□ -1.59
SCFD1-202ENST00000396629 LINC00526Q96FQ7 95 aa5.1□□□□□ -1.59
SCFD1-202ENST00000396629 MARVELD1Q9BSK0 173 aa5.1□□□□□ -1.59
SCFD1-202ENST00000396629 NIT2Q9NQR4 276 aa5.1□□□□□ -1.59
SCFD1-202ENST00000396629 IGLV1-50A0A075B6I6 118 aa5.09□□□□□ -1.59
SCFD1-202ENST00000396629 IGHV1-58A0A0C4DH39 117 aa5.09□□□□□ -1.59
SCFD1-202ENST00000396629 S100A9P06702 114 aaKnown RBP5.09□□□□□ -1.59
SCFD1-202ENST00000396629 COTL1Q14019 142 aa5.09□□□□□ -1.59
SCFD1-202ENST00000396629 LOC107984640A0A0U1RRK4 108 aa5.09□□□□□ -1.6
SCFD1-202ENST00000396629 SYCNQ0VAF6 134 aa5.09□□□□□ -1.6
SCFD1-202ENST00000396629 C1orf137Q5JT78 98 aa5.09□□□□□ -1.6
SCFD1-202ENST00000396629 GAGE2BQ13066 116 aa5.08□□□□□ -1.6
SCFD1-202ENST00000396629 STOML3Q8TAV4 291 aa5.08□□□□□ -1.6
SCFD1-202ENST00000396629 H0Y9J4 135 aa5.07□□□□□ -1.6
SCFD1-202ENST00000396629 IGLV7-43P04211 117 aa5.07□□□□□ -1.6
SCFD1-202ENST00000396629 IGLC6P0CF74 106 aa5.07□□□□□ -1.6
SCFD1-202ENST00000396629 CST9LP1Q5W188 147 aa5.07□□□□□ -1.6
SCFD1-202ENST00000396629 BAGE2Q86Y30 109 aa5.07□□□□□ -1.6
SCFD1-202ENST00000396629 MAP1LC3B2A6NCE7 125 aa5.07□□□□□ -1.6
SCFD1-202ENST00000396629 H7C423 109 aa5.07□□□□□ -1.6
SCFD1-202ENST00000396629 KRTAP1-4P0C5Y4 121 aa5.07□□□□□ -1.6
SCFD1-202ENST00000396629 C9orf116Q5BN46 136 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-202ENST00000396629 AMMECR1LQ6DCA0 310 aa5.07□□□□□ -1.6
SCFD1-202ENST00000396629 RPL7L1Q6DKI1 246 aaKnown RBP5.07□□□□□ -1.6
SCFD1-202ENST00000396629 LINC00299Q6ZSB3 139 aa5.07□□□□□ -1.6
SCFD1-202ENST00000396629 OR5A1Q8NGJ0 315 aa5.07□□□□□ -1.6
SCFD1-202ENST00000396629 MAP1LC3BQ9GZQ8 125 aa5.07□□□□□ -1.6
SCFD1-202ENST00000396629 ZNF561-AS1K7EIQ3 104 aa5.06□□□□□ -1.6
SCFD1-202ENST00000396629 UPK1BO75841 260 aa5.06□□□□□ -1.6
SCFD1-202ENST00000396629 XCL1P47992 114 aa5.06□□□□□ -1.6
SCFD1-202ENST00000396629 IFITM3Q01628 133 aa5.06□□□□□ -1.6
SCFD1-202ENST00000396629 PHF5AQ7RTV0 110 aaKnown RBP5.06□□□□□ -1.6
SCFD1-202ENST00000396629 LINC00959A0A1B0GUT2 108 aa5.06□□□□□ -1.6
SCFD1-202ENST00000396629 CCL25O15444 150 aa5.06□□□□□ -1.6
SCFD1-202ENST00000396629 NCR2O95944 276 aa5.06□□□□□ -1.6
SCFD1-202ENST00000396629 FGF6P10767 208 aa5.06□□□□□ -1.6
SCFD1-202ENST00000396629 NTF3P20783 257 aa5.06□□□□□ -1.6
SCFD1-202ENST00000396629 CAMPP49913 170 aa5.06□□□□□ -1.6
SCFD1-202ENST00000396629 AKR1C8PQ5T2L2 129 aa5.06□□□□□ -1.6
SCFD1-202ENST00000396629 RNASEKQ6P5S7 137 aaKnown RBP5.06□□□□□ -1.6
SCFD1-202ENST00000396629 S100ZQ8WXG8 99 aa5.06□□□□□ -1.6
SCFD1-202ENST00000396629 ISOC2Q96AB3 205 aa5.06□□□□□ -1.6
SCFD1-202ENST00000396629 MUC17Q685J3 4493 aa5.05□□□□□ -1.6
SCFD1-202ENST00000396629 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-202ENST00000396629 BORCS7-ASMTA0A0B4J1R7 106 aa5.05□□□□□ -1.6
SCFD1-202ENST00000396629 SCO2A0A1W2PP80 73 aa5.05□□□□□ -1.6
SCFD1-202ENST00000396629 IGKV2-29A2NJV5 120 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-202ENST00000396629 PAGE4O60829 102 aa5.05□□□□□ -1.6
SCFD1-202ENST00000396629 TRGC1P0CF51 173 aa5.05□□□□□ -1.6
SCFD1-202ENST00000396629 Q6ZNX1 250 aa5.05□□□□□ -1.6
SCFD1-202ENST00000396629 NUP35Q8NFH5 326 aa5.05□□□□□ -1.6
SCFD1-202ENST00000396629 IGLV4-69A0A075B6H9 119 aa5.04□□□□□ -1.6
SCFD1-202ENST00000396629 BCL2P10415 239 aa5.04□□□□□ -1.6
SCFD1-202ENST00000396629 ZNF25P17030 456 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-202ENST00000396629 RPS20P60866 119 aaKnown RBP5.04□□□□□ -1.6
SCFD1-202ENST00000396629 TPPP3Q9BW30 176 aa5.04□□□□□ -1.6
SCFD1-202ENST00000396629 TRAV1-1A0A0B4J248 108 aa5.04□□□□□ -1.6
SCFD1-202ENST00000396629 F2Z2F3 143 aa5.04□□□□□ -1.6
SCFD1-202ENST00000396629 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-202ENST00000396629 RPL13AP40429 203 aaKnown RBP5.04□□□□□ -1.6
SCFD1-202ENST00000396629 MEF2BQ02080 365 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-202ENST00000396629 CD164L2Q6UWJ8 174 aa5.04□□□□□ -1.6
SCFD1-202ENST00000396629 APOMO95445 188 aa5.03□□□□□ -1.6
SCFD1-202ENST00000396629 APCSP02743 223 aa5.03□□□□□ -1.6
SCFD1-202ENST00000396629 Q5BKY6 102 aa5.03□□□□□ -1.6
SCFD1-202ENST00000396629 TMUB2Q71RG4 321 aa5.03□□□□□ -1.6
SCFD1-202ENST00000396629 KRTAP11-1Q8IUC1 163 aa5.03□□□□□ -1.6
SCFD1-202ENST00000396629 GATD1Q8NB37 220 aa5.03□□□□□ -1.6
SCFD1-202ENST00000396629 UBE2D1P51668 147 aa5.02□□□□□ -1.61
SCFD1-202ENST00000396629 SS18Q15532 418 aa5.02□□□□□ -1.61
SCFD1-202ENST00000396629 OR2D3Q8NGH3 330 aa5.02□□□□□ -1.61
SCFD1-202ENST00000396629 NDUFA13Q9P0J0 144 aa5.02□□□□□ -1.61
SCFD1-202ENST00000396629 CARHSP1Q9Y2V2 147 aaKnown RBP5.02□□□□□ -1.61
SCFD1-202ENST00000396629 hCG_2014768A0A024R1R8 64 aa5.02□□□□□ -1.61
SCFD1-202ENST00000396629 A0A087WZ39 114 aa5.02□□□□□ -1.61
SCFD1-202ENST00000396629 C19orf71A6NCJ1 209 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms