RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 NOP10Q9NPE3 64 aaKnown RBP11.67□□□□□ -0.54
SNX6-202ENST00000396526 SPANXA1Q9NS26 97 aa11.67□□□□□ -0.54
SNX6-202ENST00000396526 C19orf73Q9NVV2 129 aa11.67□□□□□ -0.54
SNX6-202ENST00000396526 GCN1Q92616 2671 aaKnown RBP11.66□□□□□ -0.54
SNX6-202ENST00000396526 H3BRM9 83 aa11.66□□□□□ -0.54
SNX6-202ENST00000396526 EMP1P54849 157 aa11.66□□□□□ -0.54
SNX6-202ENST00000396526 ZNF815PA8K554 130 aa11.66□□□□□ -0.54
SNX6-202ENST00000396526 CRLF1O75462 422 aa11.66□□□□□ -0.54
SNX6-202ENST00000396526 WFDC10AQ9H1F0 79 aa11.66□□□□□ -0.54
SNX6-202ENST00000396526 NBPF19A0A087WUL8 3843 aa11.66□□□□□ -0.54
SNX6-202ENST00000396526 SMIM13P0DJ93 91 aa11.65□□□□□ -0.54
SNX6-202ENST00000396526 Q6ZSN1 163 aa11.65□□□□□ -0.54
SNX6-202ENST00000396526 ZNRF2Q8NHG8 242 aa11.65□□□□□ -0.54
SNX6-202ENST00000396526 ZNF469Q96JG9 3925 aaPredicted RBP11.65□□□□□ -0.54
SNX6-202ENST00000396526 FN1P02751 2386 aaKnown RBP11.65□□□□□ -0.54
SNX6-202ENST00000396526 IGLV4-69A0A075B6H9 119 aa11.65□□□□□ -0.54
SNX6-202ENST00000396526 Q6ZTI0 123 aa11.65□□□□□ -0.54
SNX6-202ENST00000396526 MAPKAPK5-AS1Q8N8E1 139 aa11.65□□□□□ -0.54
SNX6-202ENST00000396526 IGLV4-3A0A075B6K6 122 aa11.64□□□□□ -0.55
SNX6-202ENST00000396526 TRBV7-3A0A075B6L6 115 aa11.64□□□□□ -0.55
SNX6-202ENST00000396526 KRTAP10-3P60369 221 aa11.64□□□□□ -0.55
SNX6-202ENST00000396526 UBE2V1Q13404 147 aa11.64□□□□□ -0.55
SNX6-202ENST00000396526 NFE4Q86UQ8 179 aa11.64□□□□□ -0.55
SNX6-202ENST00000396526 IL17DQ8TAD2 202 aa11.64□□□□□ -0.55
SNX6-202ENST00000396526 PHLDA1Q8WV24 401 aaPredicted RBP11.64□□□□□ -0.55
SNX6-202ENST00000396526 Q6ZVH6 145 aa11.64□□□□□ -0.55
SNX6-202ENST00000396526 K7EQD1 137 aa11.63□□□□□ -0.55
SNX6-202ENST00000396526 LGALS3P17931 250 aaKnown RBP11.63□□□□□ -0.55
SNX6-202ENST00000396526 CEND1Q8N111 149 aa11.63□□□□□ -0.55
SNX6-202ENST00000396526 ZNF479Q96JC4 524 aa11.63□□□□□ -0.55
SNX6-202ENST00000396526 OPRPNQ99935 248 aaPredicted RBP11.63□□□□□ -0.55
SNX6-202ENST00000396526 C2CD3Q4AC94 2353 aa11.63□□□□□ -0.55
SNX6-202ENST00000396526 DAZ4Q86SG3 579 aaKnown RBP11.62□□□□□ -0.55
SNX6-202ENST00000396526 DAZ3Q9NR90 486 aaKnown RBP11.62□□□□□ -0.55
SNX6-202ENST00000396526 IGHV3-38A0A0C4DH36 116 aa11.62□□□□□ -0.55
SNX6-202ENST00000396526 GAGE12BA1L429 117 aa11.62□□□□□ -0.55
SNX6-202ENST00000396526 GAGE7O76087 117 aa11.62□□□□□ -0.55
SNX6-202ENST00000396526 GIG44P09565 113 aaPredicted RBP11.62□□□□□ -0.55
SNX6-202ENST00000396526 GAGE12FP0CL80 117 aa11.62□□□□□ -0.55
SNX6-202ENST00000396526 GAGE12GP0CL81 117 aa11.62□□□□□ -0.55
SNX6-202ENST00000396526 GAGE12IP0CL82 117 aa11.62□□□□□ -0.55
SNX6-202ENST00000396526 SRSF9Q13242 221 aaKnown RBP eCLIP11.62□□□□□ -0.551e-7■■■■□ 24.7
SNX6-202ENST00000396526 TM2D2Q9BX73 214 aa11.62□□□□□ -0.55
SNX6-202ENST00000396526 C9orf118A6NHY6 69 aa11.61□□□□□ -0.55
SNX6-202ENST00000396526 PLEKHB2Q96CS7 222 aa11.61□□□□□ -0.55
SNX6-202ENST00000396526 TRGV4A0A0C4DH28 118 aa11.6□□□□□ -0.55
SNX6-202ENST00000396526 TMEM238LA0A1B0GVL6 79 aa11.6□□□□□ -0.55
SNX6-202ENST00000396526 A6NJY4 79 aa11.6□□□□□ -0.55
SNX6-202ENST00000396526 OVOL2Q9BRP0 275 aa11.6□□□□□ -0.55
SNX6-202ENST00000396526 JMJD1CQ15652 2540 aa11.6□□□□□ -0.55
SNX6-202ENST00000396526 GTF2H5Q6ZYL4 71 aa11.6□□□□□ -0.55
SNX6-202ENST00000396526 RAB37Q96AX2 223 aa11.59□□□□□ -0.55
SNX6-202ENST00000396526 CHCHD7Q9BUK0 85 aa11.59□□□□□ -0.55
SNX6-202ENST00000396526 SETXQ7Z333 2677 aaKnown RBP11.59□□□□□ -0.55
SNX6-202ENST00000396526 A0A0J9YXV3 536 aa11.59□□□□□ -0.55
SNX6-202ENST00000396526 CSNK1G2-AS1Q8NCQ2 148 aa11.59□□□□□ -0.55
SNX6-202ENST00000396526 AMELXQ99217 191 aa11.59□□□□□ -0.55
SNX6-202ENST00000396526 J3QQQ9 107 aa11.59□□□□□ -0.55
SNX6-202ENST00000396526 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.58□□□□□ -0.56
SNX6-202ENST00000396526 IGKV2-29A2NJV5 120 aaPredicted RBP11.58□□□□□ -0.56
SNX6-202ENST00000396526 FXYD2P54710 66 aa11.58□□□□□ -0.56
SNX6-202ENST00000396526 AMMECR1LQ6DCA0 310 aa11.58□□□□□ -0.56
SNX6-202ENST00000396526 GEMIN7Q9H840 131 aaKnown RBP11.58□□□□□ -0.56
SNX6-202ENST00000396526 NHP2Q9NX24 153 aaKnown RBP11.58□□□□□ -0.56
SNX6-202ENST00000396526 TIMM21Q9BVV7 248 aa11.58□□□□□ -0.56
SNX6-202ENST00000396526 Q9UF83 564 aa11.58□□□□□ -0.56
SNX6-202ENST00000396526 UBE2D4Q9Y2X8 147 aa11.58□□□□□ -0.56
SNX6-202ENST00000396526 LEPROTO15243 131 aa11.58□□□□□ -0.56
SNX6-202ENST00000396526 SLC25A29Q8N8R3 303 aa11.58□□□□□ -0.56
SNX6-202ENST00000396526 GAGE12JA6NER3 117 aa11.57□□□□□ -0.56
SNX6-202ENST00000396526 GAGE10A6NGK3 116 aa11.57□□□□□ -0.56
SNX6-202ENST00000396526 H3BUT2 72 aa11.57□□□□□ -0.56
SNX6-202ENST00000396526 GAGE4Q13068 117 aa11.57□□□□□ -0.56
SNX6-202ENST00000396526 GAGE5Q13069 117 aa11.57□□□□□ -0.56
SNX6-202ENST00000396526 GAGE13Q4V321 117 aa11.57□□□□□ -0.56
SNX6-202ENST00000396526 NACAE9PAV3 2078 aa11.57□□□□□ -0.56
SNX6-202ENST00000396526 TRBV6-4A0A1B0GX49 114 aa11.57□□□□□ -0.56
SNX6-202ENST00000396526 SMIM9A6NGZ8 99 aa11.57□□□□□ -0.56
SNX6-202ENST00000396526 ANK3Q12955 4377 aaKnown RBP11.56□□□□□ -0.56
SNX6-202ENST00000396526 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.56□□□□□ -0.56
SNX6-202ENST00000396526 TMEM223A0PJW6 202 aa11.56□□□□□ -0.56
SNX6-202ENST00000396526 ZNF22P17026 224 aaPredicted RBP11.56□□□□□ -0.56
SNX6-202ENST00000396526 UBE2L6O14933 153 aa11.56□□□□□ -0.56
SNX6-202ENST00000396526 MRPS36P82909 103 aaKnown RBP11.56□□□□□ -0.56
SNX6-202ENST00000396526 FABP2P12104 132 aa11.55□□□□□ -0.56
SNX6-202ENST00000396526 CEMP1Q6PRD7 247 aaPredicted RBP11.55□□□□□ -0.56
SNX6-202ENST00000396526 CCL25O15444 150 aa11.55□□□□□ -0.56
SNX6-202ENST00000396526 APOC4P55056 127 aa11.54□□□□□ -0.56
SNX6-202ENST00000396526 UBE2D3P61077 147 aa11.54□□□□□ -0.56
SNX6-202ENST00000396526 UBE2D2P62837 147 aa11.54□□□□□ -0.56
SNX6-202ENST00000396526 CITED1Q99966 193 aa11.54□□□□□ -0.56
SNX6-202ENST00000396526 TINCRA0A1B0GVN0 87 aa11.54□□□□□ -0.56
SNX6-202ENST00000396526 PLAC8L1A1L4L8 177 aa11.53□□□□□ -0.56
SNX6-202ENST00000396526 TMEM101Q96IK0 257 aa11.53□□□□□ -0.56
SNX6-202ENST00000396526 SAMD5Q5TGI4 173 aa11.53□□□□□ -0.56
SNX6-202ENST00000396526 Q6ZUT4 128 aa11.53□□□□□ -0.56
SNX6-202ENST00000396526 KIR2DL5BQ8NHK3 375 aa11.53□□□□□ -0.56
SNX6-202ENST00000396526 TMEM243Q9BU79 118 aa11.53□□□□□ -0.56
SNX6-202ENST00000396526 RNASE13Q5GAN3 156 aaKnown RBP11.52□□□□□ -0.56
SNX6-202ENST00000396526 OR5A1Q8NGJ0 315 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms