RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ZNF575Q86XF7 245 aa11.65□□□□□ -0.54
SMARCD1-202ENST00000394963 C3orf56Q8N813 242 aa11.65□□□□□ -0.54
SMARCD1-202ENST00000394963 TRBV25-1A0A075B6N4 114 aa11.65□□□□□ -0.54
SMARCD1-202ENST00000394963 C11orf86A6NJI1 115 aa11.65□□□□□ -0.54
SMARCD1-202ENST00000394963 PMVKQ15126 192 aa11.65□□□□□ -0.54
SMARCD1-202ENST00000394963 SMIM13P0DJ93 91 aa11.65□□□□□ -0.54
SMARCD1-202ENST00000394963 GAGE6Q13070 117 aa11.64□□□□□ -0.55
SMARCD1-202ENST00000394963 VPS25Q9BRG1 176 aa11.64□□□□□ -0.55
SMARCD1-202ENST00000394963 RNASE1P07998 156 aaKnown RBP11.64□□□□□ -0.55
SMARCD1-202ENST00000394963 COX8CQ7Z4L0 72 aa11.64□□□□□ -0.55
SMARCD1-202ENST00000394963 MAPKAPK5-AS1Q8N8E1 139 aa11.64□□□□□ -0.55
SMARCD1-202ENST00000394963 KMT2BQ9UMN6 2715 aaPredicted RBP11.64□□□□□ -0.55
SMARCD1-202ENST00000394963 M0QY20 66 aa11.64□□□□□ -0.55
SMARCD1-202ENST00000394963 TMEM86BQ8N661 226 aa11.64□□□□□ -0.55
SMARCD1-202ENST00000394963 TENM1Q9UKZ4 2725 aa11.64□□□□□ -0.55
SMARCD1-202ENST00000394963 CRXO43186 299 aaPredicted RBP11.63□□□□□ -0.55
SMARCD1-202ENST00000394963 PDZD2O15018 2839 aa11.63□□□□□ -0.55
SMARCD1-202ENST00000394963 Q6ZSN1 163 aa11.63□□□□□ -0.55
SMARCD1-202ENST00000394963 FXYD2P54710 66 aa11.63□□□□□ -0.55
SMARCD1-202ENST00000394963 COX11Q9Y6N1 276 aa11.63□□□□□ -0.55
SMARCD1-202ENST00000394963 VWFP04275 2813 aa11.62□□□□□ -0.55
SMARCD1-202ENST00000394963 LOC100131303A0A0U1RQF7 123 aa11.62□□□□□ -0.55
SMARCD1-202ENST00000394963 A8MZ25 164 aa11.62□□□□□ -0.55
SMARCD1-202ENST00000394963 HSD52Q0P140 79 aa11.62□□□□□ -0.55
SMARCD1-202ENST00000394963 AMTNQ6UX39 209 aa11.62□□□□□ -0.55
SMARCD1-202ENST00000394963 SPINK8P0C7L1 97 aa11.62□□□□□ -0.55
SMARCD1-202ENST00000394963 TRAV8-3A0A0A6YYJ7 113 aa11.62□□□□□ -0.55
SMARCD1-202ENST00000394963 MEIG1Q5JSS6 88 aa11.62□□□□□ -0.55
SMARCD1-202ENST00000394963 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.62□□□□□ -0.55
SMARCD1-202ENST00000394963 FABP2P12104 132 aa11.61□□□□□ -0.55
SMARCD1-202ENST00000394963 SPCS1Q9Y6A9 102 aa11.61□□□□□ -0.55
SMARCD1-202ENST00000394963 TOMM6Q96B49 74 aa11.61□□□□□ -0.55
SMARCD1-202ENST00000394963 CIDEAO60543 219 aa11.6□□□□□ -0.55
SMARCD1-202ENST00000394963 PRB2P02812 416 aaPredicted RBP11.6□□□□□ -0.55
SMARCD1-202ENST00000394963 NDUFA7O95182 113 aa11.59□□□□□ -0.55
SMARCD1-202ENST00000394963 DAND5Q8N907 189 aa11.59□□□□□ -0.55
SMARCD1-202ENST00000394963 PAPPA-AS1Q5QFB9 102 aa11.59□□□□□ -0.55
SMARCD1-202ENST00000394963 CFAP126Q5VTH2 177 aa11.59□□□□□ -0.55
SMARCD1-202ENST00000394963 C1QTNF4Q9BXJ3 329 aa11.59□□□□□ -0.55
SMARCD1-202ENST00000394963 ZNF580Q9UK33 172 aa11.59□□□□□ -0.55
SMARCD1-202ENST00000394963 MRAPQ8TCY5 172 aa11.58□□□□□ -0.55
SMARCD1-202ENST00000394963 DEFB121Q5J5C9 76 aa11.58□□□□□ -0.56
SMARCD1-202ENST00000394963 C9orf85Q96MD7 179 aa11.58□□□□□ -0.56
SMARCD1-202ENST00000394963 F5H768 121 aa11.58□□□□□ -0.56
SMARCD1-202ENST00000394963 OXLD1Q5BKU9 147 aa11.58□□□□□ -0.56
SMARCD1-202ENST00000394963 C1orf158Q8N1D5 194 aa11.58□□□□□ -0.56
SMARCD1-202ENST00000394963 FBN1P35555 2871 aaKnown RBP11.58□□□□□ -0.56
SMARCD1-202ENST00000394963 IGLV2-18A0A075B6J9 118 aa11.57□□□□□ -0.56
SMARCD1-202ENST00000394963 BRI3O95415 125 aa11.57□□□□□ -0.56
SMARCD1-202ENST00000394963 GTF2H5Q6ZYL4 71 aa11.57□□□□□ -0.56
SMARCD1-202ENST00000394963 CST9LQ9H4G1 147 aa11.57□□□□□ -0.56
SMARCD1-202ENST00000394963 IGHV4-4A0A075B6R2 117 aa11.57□□□□□ -0.56
SMARCD1-202ENST00000394963 MYMXA0A1B0GTQ4 84 aa11.57□□□□□ -0.56
SMARCD1-202ENST00000394963 TRBV7-9A0A0J9YWB2 115 aa11.56□□□□□ -0.56
SMARCD1-202ENST00000394963 RHODO00212 210 aa11.56□□□□□ -0.56
SMARCD1-202ENST00000394963 FGF6P10767 208 aa11.56□□□□□ -0.56
SMARCD1-202ENST00000394963 SAMD5Q5TGI4 173 aa11.56□□□□□ -0.56
SMARCD1-202ENST00000394963 BOD1L2Q8IYS8 172 aa11.56□□□□□ -0.56
SMARCD1-202ENST00000394963 TMEM101Q96IK0 257 aa11.56□□□□□ -0.56
SMARCD1-202ENST00000394963 OR5A1Q8NGJ0 315 aa11.56□□□□□ -0.56
SMARCD1-202ENST00000394963 LINC00467Q9BRT7 94 aa11.56□□□□□ -0.56
SMARCD1-202ENST00000394963 TIMM21Q9BVV7 248 aa11.56□□□□□ -0.56
SMARCD1-202ENST00000394963 CCL25O15444 150 aa11.56□□□□□ -0.56
SMARCD1-202ENST00000394963 Q6ZUT4 128 aa11.56□□□□□ -0.56
SMARCD1-202ENST00000394963 C2orf91Q6ZV80 131 aa11.56□□□□□ -0.56
SMARCD1-202ENST00000394963 C20orf203Q8NBC4 194 aa11.56□□□□□ -0.56
SMARCD1-202ENST00000394963 MED14OSP0DP75 135 aa11.55□□□□□ -0.56
SMARCD1-202ENST00000394963 POLR2KP53803 58 aaKnown RBP11.55□□□□□ -0.56
SMARCD1-202ENST00000394963 PLEKHB2Q96CS7 222 aa11.55□□□□□ -0.56
SMARCD1-202ENST00000394963 TMEM141Q96I45 108 aa11.55□□□□□ -0.56
SMARCD1-202ENST00000394963 KRTAP1-1Q07627 177 aa11.55□□□□□ -0.56
SMARCD1-202ENST00000394963 HHLA3Q9XRX5 114 aa11.55□□□□□ -0.56
SMARCD1-202ENST00000394963 J3QQQ9 107 aa11.55□□□□□ -0.56
SMARCD1-202ENST00000394963 KLK9Q2XQG4 91 aa11.55□□□□□ -0.56
SMARCD1-202ENST00000394963 SLC25A29Q8N8R3 303 aa11.55□□□□□ -0.56
SMARCD1-202ENST00000394963 NEXN-AS1Q8NBZ9 246 aa11.55□□□□□ -0.56
SMARCD1-202ENST00000394963 FAM110AQ9BQ89 295 aa11.55□□□□□ -0.56
SMARCD1-202ENST00000394963 TAX1BP3O14907 124 aa11.54□□□□□ -0.56
SMARCD1-202ENST00000394963 LINC00315P59091 139 aa11.54□□□□□ -0.56
SMARCD1-202ENST00000394963 SEC11AP67812 179 aa11.54□□□□□ -0.56
SMARCD1-202ENST00000394963 SPATA3Q8NHX4 192 aa11.54□□□□□ -0.56
SMARCD1-202ENST00000394963 FAM19A4Q96LR4 140 aa11.54□□□□□ -0.56
SMARCD1-202ENST00000394963 IGLV10-54A0A075B6I4 117 aa11.54□□□□□ -0.56
SMARCD1-202ENST00000394963 Q8N2B8 174 aa11.53□□□□□ -0.56
SMARCD1-202ENST00000394963 PGPEP1Q9NXJ5 209 aa11.53□□□□□ -0.56
SMARCD1-202ENST00000394963 KIF25-AS1Q9Y6Z4 181 aa11.53□□□□□ -0.56
SMARCD1-202ENST00000394963 LINC01549A6NIU2 74 aa11.53□□□□□ -0.56
SMARCD1-202ENST00000394963 TSHBP01222 138 aa11.53□□□□□ -0.56
SMARCD1-202ENST00000394963 UBE2V1Q13404 147 aa11.53□□□□□ -0.56
SMARCD1-202ENST00000394963 TRBV7-3A0A075B6L6 115 aa11.52□□□□□ -0.57
SMARCD1-202ENST00000394963 ODF3Q96PU9 254 aa11.52□□□□□ -0.57
SMARCD1-202ENST00000394963 TMEM263Q8WUH6 116 aaKnown RBP11.51□□□□□ -0.57
SMARCD1-202ENST00000394963 GYPEP15421 78 aa11.51□□□□□ -0.57
SMARCD1-202ENST00000394963 DAD1P61803 113 aa11.51□□□□□ -0.57
SMARCD1-202ENST00000394963 TRAV25A0A0B4J276 109 aa11.51□□□□□ -0.57
SMARCD1-202ENST00000394963 C5orf38Q86SI9 138 aa11.51□□□□□ -0.57
SMARCD1-202ENST00000394963 MORN3Q6PF18 240 aaPredicted RBP11.5□□□□□ -0.57
SMARCD1-202ENST00000394963 TRBV27A0A0K0K1C4 114 aa11.5□□□□□ -0.57
SMARCD1-202ENST00000394963 TMEM238LA0A1B0GVL6 79 aa11.5□□□□□ -0.57
SMARCD1-202ENST00000394963 A6NJY4 79 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms