RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 K7EQD1 137 aa13.53□□□□□ -0.24
CLDND1-203ENST00000394181 EREGO14944 169 aa13.53□□□□□ -0.24
CLDND1-203ENST00000394181 APOC4P55056 127 aa13.53□□□□□ -0.24
CLDND1-203ENST00000394181 DNAJC30Q96LL9 226 aa13.53□□□□□ -0.24
CLDND1-203ENST00000394181 LOC100131303A0A0U1RQF7 123 aa13.52□□□□□ -0.24
CLDND1-203ENST00000394181 G0S2P27469 103 aa13.52□□□□□ -0.24
CLDND1-203ENST00000394181 CHTOPQ9Y3Y2 248 aaKnown RBP13.52□□□□□ -0.24
CLDND1-203ENST00000394181 CEMP1Q6PRD7 247 aaPredicted RBP13.52□□□□□ -0.25
CLDND1-203ENST00000394181 OR11H2Q8NH07 326 aa13.52□□□□□ -0.25
CLDND1-203ENST00000394181 SNHG12Q9BXW3 62 aa13.52□□□□□ -0.25
CLDND1-203ENST00000394181 CHCHD7Q9BUK0 85 aa13.51□□□□□ -0.25
CLDND1-203ENST00000394181 DNAH3Q8TD57 4116 aa13.51□□□□□ -0.25
CLDND1-203ENST00000394181 TRBV7-3A0A075B6L6 115 aa13.51□□□□□ -0.25
CLDND1-203ENST00000394181 IGKV2D-26A0A0A0MRZ7 120 aa13.51□□□□□ -0.25
CLDND1-203ENST00000394181 GAGE12JA6NER3 117 aa13.51□□□□□ -0.25
CLDND1-203ENST00000394181 F8VRH5 84 aa13.51□□□□□ -0.25
CLDND1-203ENST00000394181 HNRNPA3P51991 378 aaKnown RBP13.51□□□□□ -0.25
CLDND1-203ENST00000394181 GAGE1Q13065 139 aa13.51□□□□□ -0.25
CLDND1-203ENST00000394181 GAGE4Q13068 117 aa13.51□□□□□ -0.25
CLDND1-203ENST00000394181 GAGE5Q13069 117 aa13.51□□□□□ -0.25
CLDND1-203ENST00000394181 GAGE13Q4V321 117 aa13.51□□□□□ -0.25
CLDND1-203ENST00000394181 TIMM17AQ99595 171 aa13.51□□□□□ -0.25
CLDND1-203ENST00000394181 FHL2Q14192 279 aa13.5□□□□□ -0.25
CLDND1-203ENST00000394181 FAM104AQ969W3 186 aa13.5□□□□□ -0.25
CLDND1-203ENST00000394181 TMEM141Q96I45 108 aa13.5□□□□□ -0.25
CLDND1-203ENST00000394181 CST9LQ9H4G1 147 aa13.5□□□□□ -0.25
CLDND1-203ENST00000394181 SMIM9A6NGZ8 99 aa13.49□□□□□ -0.25
CLDND1-203ENST00000394181 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.49□□□□□ -0.25
CLDND1-203ENST00000394181 IGKV2-29A2NJV5 120 aaPredicted RBP13.49□□□□□ -0.25
CLDND1-203ENST00000394181 G3V4G9 280 aa13.49□□□□□ -0.25
CLDND1-203ENST00000394181 SLC25A34Q6PIV7 304 aa13.49□□□□□ -0.25
CLDND1-203ENST00000394181 TRGV4A0A0C4DH28 118 aa13.48□□□□□ -0.25
CLDND1-203ENST00000394181 COX8AP10176 69 aa13.48□□□□□ -0.25
CLDND1-203ENST00000394181 PCP2Q8IVA1 136 aa13.48□□□□□ -0.25
CLDND1-203ENST00000394181 IGHV4-28A0A0C4DH34 117 aa13.48□□□□□ -0.25
CLDND1-203ENST00000394181 FGF6P10767 208 aa13.48□□□□□ -0.25
CLDND1-203ENST00000394181 NMUP48645 174 aa13.48□□□□□ -0.25
CLDND1-203ENST00000394181 EGFEM1PQ0D2K5 195 aa13.48□□□□□ -0.25
CLDND1-203ENST00000394181 PMVKQ15126 192 aa13.48□□□□□ -0.25
CLDND1-203ENST00000394181 FAM222AQ5U5X8 452 aa13.48□□□□□ -0.25
CLDND1-203ENST00000394181 LINC00612Q8N6U2 182 aa13.48□□□□□ -0.25
CLDND1-203ENST00000394181 TTTY13Q9BZ97 58 aa13.48□□□□□ -0.25
CLDND1-203ENST00000394181 TRBV10-1A0A0K0K1A3 114 aa13.47□□□□□ -0.25
CLDND1-203ENST00000394181 RPL36AP83881 106 aaKnown RBP13.47□□□□□ -0.25
CLDND1-203ENST00000394181 COTL1Q14019 142 aa13.47□□□□□ -0.25
CLDND1-203ENST00000394181 RPL36ALQ969Q0 106 aaKnown RBP13.47□□□□□ -0.25
CLDND1-203ENST00000394181 IGLV4-69A0A075B6H9 119 aa13.47□□□□□ -0.25
CLDND1-203ENST00000394181 PLNP26678 52 aa13.47□□□□□ -0.25
CLDND1-203ENST00000394181 UBE2D3P61077 147 aa13.47□□□□□ -0.25
CLDND1-203ENST00000394181 UBE2D2P62837 147 aa13.47□□□□□ -0.25
CLDND1-203ENST00000394181 NTM-AS1Q6ZSK4 140 aa13.47□□□□□ -0.25
CLDND1-203ENST00000394181 IGLV4-3A0A075B6K6 122 aa13.46□□□□□ -0.25
CLDND1-203ENST00000394181 LINC01549A6NIU2 74 aa13.46□□□□□ -0.25
CLDND1-203ENST00000394181 RNASE13Q5GAN3 156 aaKnown RBP13.45□□□□□ -0.26
CLDND1-203ENST00000394181 NOTCH1P46531 2555 aa13.45□□□□□ -0.26
CLDND1-203ENST00000394181 TRBV6-4A0A1B0GX49 114 aa13.45□□□□□ -0.26
CLDND1-203ENST00000394181 M0R143 59 aa13.45□□□□□ -0.26
CLDND1-203ENST00000394181 Q8NAQ8 132 aa13.45□□□□□ -0.26
CLDND1-203ENST00000394181 RNF183Q96D59 192 aa13.45□□□□□ -0.26
CLDND1-203ENST00000394181 C11orf86A6NJI1 115 aa13.44□□□□□ -0.26
CLDND1-203ENST00000394181 BATFQ16520 125 aa13.44□□□□□ -0.26
CLDND1-203ENST00000394181 MRPS16Q9Y3D3 137 aaKnown RBP13.44□□□□□ -0.26
CLDND1-203ENST00000394181 C2orf91Q6ZV80 131 aa13.43□□□□□ -0.26
CLDND1-203ENST00000394181 CELA1Q9UNI1 258 aa13.43□□□□□ -0.26
CLDND1-203ENST00000394181 UBE2D4Q9Y2X8 147 aa13.43□□□□□ -0.26
CLDND1-203ENST00000394181 BOD1L2Q8IYS8 172 aa13.42□□□□□ -0.26
CLDND1-203ENST00000394181 LINC00694P0DN24 101 aa13.42□□□□□ -0.26
CLDND1-203ENST00000394181 RETNQ9HD89 108 aa13.42□□□□□ -0.26
CLDND1-203ENST00000394181 PYGO1Q9Y3Y4 419 aa13.42□□□□□ -0.26
CLDND1-203ENST00000394181 CIDEAO60543 219 aa13.41□□□□□ -0.26
CLDND1-203ENST00000394181 DAZ4Q86SG3 579 aaKnown RBP13.41□□□□□ -0.26
CLDND1-203ENST00000394181 DAZ3Q9NR90 486 aaKnown RBP13.41□□□□□ -0.26
CLDND1-203ENST00000394181 HINT1P49773 126 aaPredicted RBP13.41□□□□□ -0.26
CLDND1-203ENST00000394181 VCX2Q9H322 139 aa13.41□□□□□ -0.26
CLDND1-203ENST00000394181 MAPKAPK5-AS1Q8N8E1 139 aa13.4□□□□□ -0.26
CLDND1-203ENST00000394181 NBEAL1Q6ZS30 2694 aa13.4□□□□□ -0.26
CLDND1-203ENST00000394181 LYRM9A8MSI8 78 aa13.39□□□□□ -0.27
CLDND1-203ENST00000394181 MIFP14174 115 aa13.39□□□□□ -0.27
CLDND1-203ENST00000394181 A0A0J9YXV3 536 aa13.38□□□□□ -0.27
CLDND1-203ENST00000394181 Q6ZUT4 128 aa13.38□□□□□ -0.27
CLDND1-203ENST00000394181 AMELXQ99217 191 aa13.38□□□□□ -0.27
CLDND1-203ENST00000394181 TRAV8-6A0A0B4J262 113 aa13.38□□□□□ -0.27
CLDND1-203ENST00000394181 PRB2P02812 416 aaPredicted RBP13.38□□□□□ -0.27
CLDND1-203ENST00000394181 C2orf88Q9BSF0 95 aa13.38□□□□□ -0.27
CLDND1-203ENST00000394181 PRADC1Q9BSG0 188 aa13.38□□□□□ -0.27
CLDND1-203ENST00000394181 CRYBA4P53673 196 aa13.37□□□□□ -0.27
CLDND1-203ENST00000394181 MPV17L2Q567V2 206 aa13.37□□□□□ -0.27
CLDND1-203ENST00000394181 MDFIQ99750 246 aa13.37□□□□□ -0.27
CLDND1-203ENST00000394181 SBSPONQ8IVN8 264 aa13.37□□□□□ -0.27
CLDND1-203ENST00000394181 SPANXA1Q9NS26 97 aa13.37□□□□□ -0.27
CLDND1-203ENST00000394181 A8MZ25 164 aa13.35□□□□□ -0.27
CLDND1-203ENST00000394181 GYPEP15421 78 aa13.35□□□□□ -0.27
CLDND1-203ENST00000394181 DAD1P61803 113 aa13.35□□□□□ -0.27
CLDND1-203ENST00000394181 TMEM170BQ5T4T1 132 aa13.35□□□□□ -0.27
CLDND1-203ENST00000394181 SAMD5Q5TGI4 173 aa13.35□□□□□ -0.27
CLDND1-203ENST00000394181 CHAC1Q9BUX1 264 aa13.35□□□□□ -0.27
CLDND1-203ENST00000394181 DLEU1O43261 78 aa13.35□□□□□ -0.27
CLDND1-203ENST00000394181 MRPL52Q86TS9 123 aaKnown RBP13.35□□□□□ -0.27
CLDND1-203ENST00000394181 NFE4Q86UQ8 179 aa13.34□□□□□ -0.27
CLDND1-203ENST00000394181 TENM3Q9P273 2699 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms