RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 ADIRFQ15847 76 aa20.27■□□□□ 0.84
CMTM4-202ENST00000394106 V9GYV3 84 aa20.27■□□□□ 0.84
CMTM4-202ENST00000394106 A0A1B0GUT8 65 aa20.26■□□□□ 0.83
CMTM4-202ENST00000394106 LINC00269Q8N2A0 174 aa20.26■□□□□ 0.83
CMTM4-202ENST00000394106 AMTP48728 403 aa20.25■□□□□ 0.83
CMTM4-202ENST00000394106 NAT8Q9UHE5 227 aa20.25■□□□□ 0.83
CMTM4-202ENST00000394106 FAM231BA6NCW3 169 aa20.24■□□□□ 0.83
CMTM4-202ENST00000394106 MIAQ16674 131 aa20.24■□□□□ 0.83
CMTM4-202ENST00000394106 PRR34Q9NV39 138 aa20.23■□□□□ 0.83
CMTM4-202ENST00000394106 UBE2L6O14933 153 aa20.22■□□□□ 0.83
CMTM4-202ENST00000394106 SMDT1Q9H4I9 107 aa20.22■□□□□ 0.83
CMTM4-202ENST00000394106 HLA-DQA1P01909 254 aa20.21■□□□□ 0.83
CMTM4-202ENST00000394106 HAMPP81172 84 aa20.2■□□□□ 0.82
CMTM4-202ENST00000394106 TMEM191AQ9H0A3 160 aa20.2■□□□□ 0.82
CMTM4-202ENST00000394106 C20orf203Q8NBC4 194 aa20.19■□□□□ 0.82
CMTM4-202ENST00000394106 NUP35Q8NFH5 326 aa20.19■□□□□ 0.82
CMTM4-202ENST00000394106 TMEM70Q9BUB7 260 aa20.19■□□□□ 0.82
CMTM4-202ENST00000394106 IGLV4-60A0A075B6I1 120 aa20.18■□□□□ 0.82
CMTM4-202ENST00000394106 REG3AQ06141 175 aa20.18■□□□□ 0.82
CMTM4-202ENST00000394106 RIGQ13278 110 aa20.18■□□□□ 0.82
CMTM4-202ENST00000394106 A0A1B0GUV1 79 aa20.17■□□□□ 0.82
CMTM4-202ENST00000394106 SDHAF1A6NFY7 115 aa20.17■□□□□ 0.82
CMTM4-202ENST00000394106 NAT8BQ9UHF3 227 aa20.17■□□□□ 0.82
CMTM4-202ENST00000394106 GAS8-AS1O95177 125 aa20.16■□□□□ 0.82
CMTM4-202ENST00000394106 LINC01620Q4KN68 170 aa20.15■□□□□ 0.82
CMTM4-202ENST00000394106 AMN1Q8IY45 258 aa20.15■□□□□ 0.82
CMTM4-202ENST00000394106 RNF185Q96GF1 192 aa20.15■□□□□ 0.82
CMTM4-202ENST00000394106 IGLV10-54A0A075B6I4 117 aa20.14■□□□□ 0.81
CMTM4-202ENST00000394106 RAB4AP20338 218 aa20.14■□□□□ 0.81
CMTM4-202ENST00000394106 C14orf177Q52M58 125 aa20.14■□□□□ 0.81
CMTM4-202ENST00000394106 FAM30AQ9NZY2 134 aa20.14■□□□□ 0.81
CMTM4-202ENST00000394106 EPM2AB3EWF7 344 aa20.13■□□□□ 0.81
CMTM4-202ENST00000394106 USP17L23D6RBM5 183 aa20.13■□□□□ 0.81
CMTM4-202ENST00000394106 NCR2O95944 276 aa20.13■□□□□ 0.81
CMTM4-202ENST00000394106 APCSP02743 223 aa20.13■□□□□ 0.81
CMTM4-202ENST00000394106 ST20Q9HBF5 79 aa20.13■□□□□ 0.81
CMTM4-202ENST00000394106 TRBV6-5A0A0K0K1A5 114 aa20.12■□□□□ 0.81
CMTM4-202ENST00000394106 PMCHP20382 165 aa20.12■□□□□ 0.81
CMTM4-202ENST00000394106 MRAP2Q96G30 205 aa20.12■□□□□ 0.81
CMTM4-202ENST00000394106 SMIM27A0A1W2PRY6 76 aa20.11■□□□□ 0.81
CMTM4-202ENST00000394106 I3L3M4 83 aa20.11■□□□□ 0.81
CMTM4-202ENST00000394106 SMR3BP02814 79 aaPredicted RBP20.11■□□□□ 0.81
CMTM4-202ENST00000394106 KRTAP26-1Q6PEX3 210 aa20.11■□□□□ 0.81
CMTM4-202ENST00000394106 IGKV2D-29A0A075B6S2 120 aaPredicted RBP20.1■□□□□ 0.81
CMTM4-202ENST00000394106 IGKV2-29A2NJV5 120 aaPredicted RBP20.1■□□□□ 0.81
CMTM4-202ENST00000394106 RPS10P46783 165 aaKnown RBP20.1■□□□□ 0.81
CMTM4-202ENST00000394106 RAB14P61106 215 aa20.1■□□□□ 0.81
CMTM4-202ENST00000394106 AMMECR1LQ6DCA0 310 aa20.1■□□□□ 0.81
CMTM4-202ENST00000394106 TRAV8-4A0A0B4J246 113 aa20.08■□□□□ 0.81
CMTM4-202ENST00000394106 SMKR1H3BMG3 65 aa20.08■□□□□ 0.81
CMTM4-202ENST00000394106 RNASEKQ6P5S7 137 aaKnown RBP20.07■□□□□ 0.8
CMTM4-202ENST00000394106 CAMPP49913 170 aa20.06■□□□□ 0.8
CMTM4-202ENST00000394106 Q5VSD8 79 aa20.06■□□□□ 0.8
CMTM4-202ENST00000394106 TMEM242Q9NWH2 141 aa20.06■□□□□ 0.8
CMTM4-202ENST00000394106 IGKV3OR2-268A0A0C4DH90 116 aa20.05■□□□□ 0.8
CMTM4-202ENST00000394106 H7C423 109 aa20.04■□□□□ 0.8
CMTM4-202ENST00000394106 TSHBP01222 138 aa20.04■□□□□ 0.8
CMTM4-202ENST00000394106 FGF6P10767 208 aa20.04■□□□□ 0.8
CMTM4-202ENST00000394106 PRSS1P07477 247 aa20.03■□□□□ 0.8
CMTM4-202ENST00000394106 Q6ZSA8 131 aa20.03■□□□□ 0.8
CMTM4-202ENST00000394106 POLR2KP53803 58 aaKnown RBP20.02■□□□□ 0.8
CMTM4-202ENST00000394106 FAM104BQ5XKR9 115 aa20.01■□□□□ 0.79
CMTM4-202ENST00000394106 A0A1B0GW15 77 aa20■□□□□ 0.79
CMTM4-202ENST00000394106 MRPL51Q4U2R6 128 aaKnown RBP20■□□□□ 0.79
CMTM4-202ENST00000394106 MRPL54Q6P161 138 aaKnown RBP20■□□□□ 0.79
CMTM4-202ENST00000394106 TRBV27A0A0K0K1C4 114 aa19.99■□□□□ 0.79
CMTM4-202ENST00000394106 NRACQ8N912 160 aa19.99■□□□□ 0.79
CMTM4-202ENST00000394106 PPP1R17O96001 155 aa19.98■□□□□ 0.79
CMTM4-202ENST00000394106 ESDP10768 282 aa19.98■□□□□ 0.79
CMTM4-202ENST00000394106 FAM229AH3BQW9 127 aa19.97■□□□□ 0.79
CMTM4-202ENST00000394106 ZNF25P17030 456 aaPredicted RBP19.97■□□□□ 0.79
CMTM4-202ENST00000394106 TMEM101Q96IK0 257 aa19.97■□□□□ 0.79
CMTM4-202ENST00000394106 BTF3L4Q96K17 158 aa19.97■□□□□ 0.79
CMTM4-202ENST00000394106 DNAH8Q96JB1 4490 aa19.97■□□□□ 0.79
CMTM4-202ENST00000394106 GAGE12HA6NDE8 117 aa19.96■□□□□ 0.79
CMTM4-202ENST00000394106 VCYO14598 125 aa19.96■□□□□ 0.79
CMTM4-202ENST00000394106 SUMO2P61956 95 aaKnown RBP19.96■□□□□ 0.79
CMTM4-202ENST00000394106 HBBP68871 147 aa19.96■□□□□ 0.79
CMTM4-202ENST00000394106 FCER1GP30273 86 aa19.95■□□□□ 0.78
CMTM4-202ENST00000394106 CLRN3Q8NCR9 226 aa19.95■□□□□ 0.78
CMTM4-202ENST00000394106 hDV102S1A0JD36 115 aa19.94■□□□□ 0.78
CMTM4-202ENST00000394106 S100A8P05109 93 aa19.94■□□□□ 0.78
CMTM4-202ENST00000394106 CLLU1Q5K131 121 aa19.94■□□□□ 0.78
CMTM4-202ENST00000394106 DGAT2L7PQ6IED9 249 aa19.94■□□□□ 0.78
CMTM4-202ENST00000394106 OR5A1Q8NGJ0 315 aa19.94■□□□□ 0.78
CMTM4-202ENST00000394106 C7orf77A4D0Y5 90 aa19.93■□□□□ 0.78
CMTM4-202ENST00000394106 PPP1R2P9O14990 202 aa19.93■□□□□ 0.78
CMTM4-202ENST00000394106 CKS2P33552 79 aa19.93■□□□□ 0.78
CMTM4-202ENST00000394106 FAT1Q14517 4588 aa19.92■□□□□ 0.78
CMTM4-202ENST00000394106 A0A1B0GXF2 115 aa19.92■□□□□ 0.78
CMTM4-202ENST00000394106 F8W036 122 aa19.92■□□□□ 0.78
CMTM4-202ENST00000394106 SCXQ7RTU7 201 aa19.92■□□□□ 0.78
CMTM4-202ENST00000394106 CHCHD10Q8WYQ3 142 aaPredicted RBP19.92■□□□□ 0.78
CMTM4-202ENST00000394106 LINC00862A6NCI5 91 aa19.91■□□□□ 0.78
CMTM4-202ENST00000394106 INAFM2P0DMQ5 153 aa19.91■□□□□ 0.78
CMTM4-202ENST00000394106 PNRC1Q12796 327 aaPredicted RBP19.91■□□□□ 0.78
CMTM4-202ENST00000394106 KIR2DL4Q99706 377 aa19.91■□□□□ 0.78
CMTM4-202ENST00000394106 CHAC1Q9BUX1 264 aa19.89■□□□□ 0.77
CMTM4-202ENST00000394106 MRPL52Q86TS9 123 aaKnown RBP19.88■□□□□ 0.77
CMTM4-202ENST00000394106 C9orf163Q8N9P6 203 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms