RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 IGF2-ASQ6U949 168 aa12.12□□□□□ -0.47
PHTF1-205ENST00000393357 ABCA12Q86UK0 2595 aa12.12□□□□□ -0.47
PHTF1-205ENST00000393357 TIMM17AQ99595 171 aa12.12□□□□□ -0.47
PHTF1-205ENST00000393357 NIPBLQ6KC79 2804 aaeCLIP12.12□□□□□ -0.47
PHTF1-205ENST00000393357 I3L3M4 83 aa12.11□□□□□ -0.47
PHTF1-205ENST00000393357 M0QY20 66 aa12.11□□□□□ -0.47
PHTF1-205ENST00000393357 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.11□□□□□ -0.47
PHTF1-205ENST00000393357 IGHV1-69DA0A0B4J2H0 117 aa12.11□□□□□ -0.47
PHTF1-205ENST00000393357 IGHV4-38-2P0DP08 117 aa12.11□□□□□ -0.47
PHTF1-205ENST00000393357 SBSPONQ8IVN8 264 aa12.11□□□□□ -0.47
PHTF1-205ENST00000393357 EBI3Q14213 229 aa12.11□□□□□ -0.47
PHTF1-205ENST00000393357 ABCA2Q9BZC7 2435 aa12.1□□□□□ -0.47
PHTF1-205ENST00000393357 LGALS9O00182 355 aa12.1□□□□□ -0.47
PHTF1-205ENST00000393357 NDUFA7O95182 113 aa12.1□□□□□ -0.47
PHTF1-205ENST00000393357 C20orf203Q8NBC4 194 aa12.1□□□□□ -0.47
PHTF1-205ENST00000393357 U3KQE9 123 aa12.1□□□□□ -0.47
PHTF1-205ENST00000393357 NXPH4O95158 308 aa12.1□□□□□ -0.47
PHTF1-205ENST00000393357 DGAT2L7PQ6IED9 249 aa12.1□□□□□ -0.47
PHTF1-205ENST00000393357 POM121L12Q8N7R1 296 aa12.1□□□□□ -0.47
PHTF1-205ENST00000393357 MRPL53Q96EL3 112 aaKnown RBP12.1□□□□□ -0.47
PHTF1-205ENST00000393357 ZFYVE26Q68DK2 2539 aa12.1□□□□□ -0.47
PHTF1-205ENST00000393357 FLNCQ14315 2725 aa12.09□□□□□ -0.47
PHTF1-205ENST00000393357 PPDPFQ9H3Y8 114 aa12.09□□□□□ -0.47
PHTF1-205ENST00000393357 OOSP1A8MZH6 123 aa12.08□□□□□ -0.48
PHTF1-205ENST00000393357 MOB4Q9Y3A3 225 aa12.08□□□□□ -0.48
PHTF1-205ENST00000393357 TNFRSF18Q9Y5U5 241 aa12.08□□□□□ -0.48
PHTF1-205ENST00000393357 CHD6Q8TD26 2715 aa12.08□□□□□ -0.48
PHTF1-205ENST00000393357 TRBV27A0A0K0K1C4 114 aa12.08□□□□□ -0.48
PHTF1-205ENST00000393357 LOC107984640A0A0U1RRK4 108 aa12.08□□□□□ -0.48
PHTF1-205ENST00000393357 KLRB1Q12918 225 aa12.08□□□□□ -0.48
PHTF1-205ENST00000393357 DAZ1Q9NQZ3 744 aaKnown RBP12.08□□□□□ -0.48
PHTF1-205ENST00000393357 SOCS3O14543 225 aa12.07□□□□□ -0.48
PHTF1-205ENST00000393357 Q9HAA7 133 aa12.07□□□□□ -0.48
PHTF1-205ENST00000393357 LRRK2Q5S007 2527 aa12.07□□□□□ -0.48
PHTF1-205ENST00000393357 TRAV13-1A0A0B4J241 112 aa12.07□□□□□ -0.48
PHTF1-205ENST00000393357 PIEZO1Q92508 2521 aa12.07□□□□□ -0.48
PHTF1-205ENST00000393357 A0A0B4J2C4 111 aa12.06□□□□□ -0.48
PHTF1-205ENST00000393357 NDUFA4O00483 81 aa12.06□□□□□ -0.48
PHTF1-205ENST00000393357 LENEPQ9Y5L5 61 aa12.06□□□□□ -0.48
PHTF1-205ENST00000393357 IGHV4OR15-8A0A075B7B6 117 aa12.06□□□□□ -0.48
PHTF1-205ENST00000393357 A0A087WW49 117 aa12.06□□□□□ -0.48
PHTF1-205ENST00000393357 IGHV3-53P01767 116 aa12.05□□□□□ -0.48
PHTF1-205ENST00000393357 ID1P41134 155 aa12.05□□□□□ -0.48
PHTF1-205ENST00000393357 MAPK1IP1LQ8NDC0 245 aa12.05□□□□□ -0.48
PHTF1-205ENST00000393357 CDKN2A-AS1Q9UH64 79 aa12.05□□□□□ -0.48
PHTF1-205ENST00000393357 ADORA2A-AS1P86434 159 aa12.05□□□□□ -0.48
PHTF1-205ENST00000393357 NF1P21359 2839 aa12.05□□□□□ -0.48
PHTF1-205ENST00000393357 KHDC1LQ5JSQ8 128 aa12.05□□□□□ -0.48
PHTF1-205ENST00000393357 NBEAL2Q6ZNJ1 2754 aa12.04□□□□□ -0.48
PHTF1-205ENST00000393357 GAGE2AQ6NT46 116 aa12.04□□□□□ -0.48
PHTF1-205ENST00000393357 C9orf153Q5TBE3 101 aa12.04□□□□□ -0.48
PHTF1-205ENST00000393357 IGHV1OR15-1A0A075B7D0 117 aa12.03□□□□□ -0.48
PHTF1-205ENST00000393357 DEFB136Q30KP8 78 aa12.03□□□□□ -0.48
PHTF1-205ENST00000393357 Q6ZSN1 163 aa12.03□□□□□ -0.48
PHTF1-205ENST00000393357 Q9H8V8 135 aa12.03□□□□□ -0.48
PHTF1-205ENST00000393357 Q8N2B8 174 aa12.03□□□□□ -0.48
PHTF1-205ENST00000393357 FAM223BA6NKX1 122 aa12.02□□□□□ -0.49
PHTF1-205ENST00000393357 FAM223AQ8IWN6 122 aa12.02□□□□□ -0.49
PHTF1-205ENST00000393357 EDA2RQ9HAV5 297 aa12.02□□□□□ -0.49
PHTF1-205ENST00000393357 TOMM7Q9P0U1 55 aa12.02□□□□□ -0.49
PHTF1-205ENST00000393357 TRBV30A0A0K0K1B3 111 aa12.01□□□□□ -0.49
PHTF1-205ENST00000393357 KLLNB2CW77 178 aa12.01□□□□□ -0.49
PHTF1-205ENST00000393357 LMO4P61968 165 aa12.01□□□□□ -0.49
PHTF1-205ENST00000393357 RHOHQ15669 191 aa12.01□□□□□ -0.49
PHTF1-205ENST00000393357 PIK3CD-AS1Q5SR53 167 aa12.01□□□□□ -0.49
PHTF1-205ENST00000393357 LINC00694P0DN24 101 aa12.01□□□□□ -0.49
PHTF1-205ENST00000393357 LINC00467Q9BRT7 94 aa12.01□□□□□ -0.49
PHTF1-205ENST00000393357 SNRPD3P62318 126 aaKnown RBP12□□□□□ -0.49
PHTF1-205ENST00000393357 CFHR3Q02985 330 aa12□□□□□ -0.49
PHTF1-205ENST00000393357 NSUN5P1Q3KNT7 163 aa12□□□□□ -0.49
PHTF1-205ENST00000393357 LITAFQ99732 161 aa12□□□□□ -0.49
PHTF1-205ENST00000393357 IGHV1-58A0A0C4DH39 117 aa11.99□□□□□ -0.49
PHTF1-205ENST00000393357 C11orf71Q6IPW1 123 aa11.99□□□□□ -0.49
PHTF1-205ENST00000393357 MXRA5Q9NR99 2828 aa11.99□□□□□ -0.49
PHTF1-205ENST00000393357 BRI3O95415 125 aa11.99□□□□□ -0.49
PHTF1-205ENST00000393357 CFAP161Q6P656 301 aa11.99□□□□□ -0.49
PHTF1-205ENST00000393357 DCANP1Q8TF63 244 aa11.99□□□□□ -0.49
PHTF1-205ENST00000393357 MTORP42345 2549 aa11.99□□□□□ -0.49
PHTF1-205ENST00000393357 TMEM61Q8N0U2 210 aa11.99□□□□□ -0.49
PHTF1-205ENST00000393357 COX6A2Q02221 97 aa11.98□□□□□ -0.49
PHTF1-205ENST00000393357 DAZ2Q13117 558 aaKnown RBP11.98□□□□□ -0.49
PHTF1-205ENST00000393357 LY6DQ14210 128 aa11.98□□□□□ -0.49
PHTF1-205ENST00000393357 MIAQ16674 131 aa11.98□□□□□ -0.49
PHTF1-205ENST00000393357 DAZ4Q86SG3 579 aaKnown RBP11.98□□□□□ -0.49
PHTF1-205ENST00000393357 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.98□□□□□ -0.49
PHTF1-205ENST00000393357 TMEM101Q96IK0 257 aa11.98□□□□□ -0.49
PHTF1-205ENST00000393357 C11orf68Q9H3H3 251 aaKnown RBP11.98□□□□□ -0.49
PHTF1-205ENST00000393357 DAZ3Q9NR90 486 aaKnown RBP11.98□□□□□ -0.49
PHTF1-205ENST00000393357 PKD1L2Q7Z442 2459 aa11.98□□□□□ -0.49
PHTF1-205ENST00000393357 IGKV3D-7A0A0C4DH55 119 aa11.98□□□□□ -0.49
PHTF1-205ENST00000393357 DEFB131AP59861 70 aa11.98□□□□□ -0.49
PHTF1-205ENST00000393357 SMCR5Q8TEV8 140 aa11.98□□□□□ -0.49
PHTF1-205ENST00000393357 VSIG2Q96IQ7 327 aa11.98□□□□□ -0.49
PHTF1-205ENST00000393357 IGHV4-61A0A0C4DH41 118 aa11.98□□□□□ -0.49
PHTF1-205ENST00000393357 RBMY1A1P0DJD3 496 aaKnown RBP11.97□□□□□ -0.49
PHTF1-205ENST00000393357 RBMY1CP0DJD4 496 aa11.97□□□□□ -0.49
PHTF1-205ENST00000393357 RBMY1FQ15415 496 aaKnown RBP11.97□□□□□ -0.49
PHTF1-205ENST00000393357 LST1O00453 97 aa11.97□□□□□ -0.49
PHTF1-205ENST00000393357 IGHV1-69P01742 117 aa11.97□□□□□ -0.49
PHTF1-205ENST00000393357 PRIMA1Q86XR5 153 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms