RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 CCNB3Q8WWL7 1395 aa0.5□□□□□ -2.33
SNORA48.1-201ENST00000390879 LOC285095A0A1B0GVY8 99 aa0.5□□□□□ -2.33
SNORA48.1-201ENST00000390879 G3V318 75 aa0.5□□□□□ -2.33
SNORA48.1-201ENST00000390879 NMBP08949 121 aa0.5□□□□□ -2.33
SNORA48.1-201ENST00000390879 UBA52P62987 128 aaKnown RBP0.5□□□□□ -2.33
SNORA48.1-201ENST00000390879 COL5A1-AS1Q5SY13 56 aa0.5□□□□□ -2.33
SNORA48.1-201ENST00000390879 BAGE2Q86Y30 109 aa0.5□□□□□ -2.33
SNORA48.1-201ENST00000390879 SMIM4Q8WVI0 70 aa0.5□□□□□ -2.33
SNORA48.1-201ENST00000390879 FAM167A-AS1Q96KT0 104 aa0.5□□□□□ -2.33
SNORA48.1-201ENST00000390879 PMCHL2Q9BQD1 86 aa0.5□□□□□ -2.33
SNORA48.1-201ENST00000390879 FAM103A1Q9BTL3 118 aaKnown RBP0.5□□□□□ -2.33
SNORA48.1-201ENST00000390879 PRO1854Q9UHT4 67 aa0.5□□□□□ -2.33
SNORA48.1-201ENST00000390879 ARL2-SNX15V9GYD0 113 aa0.5□□□□□ -2.33
SNORA48.1-201ENST00000390879 NCOA6Q14686 2063 aaPredicted RBP0.5□□□□□ -2.33
SNORA48.1-201ENST00000390879 BCORL1Q5H9F3 1711 aa0.5□□□□□ -2.33
SNORA48.1-201ENST00000390879 KDM6BO15054 1643 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 NRKQ7Z2Y5 1582 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 ARHGAP5Q13017 1502 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 CDK13Q14004 1512 aaKnown RBP0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 FANCMQ8IYD8 2048 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 M0R3E3 92 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 UQCR11O14957 56 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 SFT2D2O95562 160 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 APOC3P02656 99 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 LINC00032P0C843 101 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 SPINK7P58062 85 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 HAMPP81172 84 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 AMELXQ99217 191 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 SNHG12Q9BXW3 62 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 DPY30Q9C005 99 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 NXT2Q9NPJ8 142 aaKnown RBP0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 CDC42SE2Q9NRR3 84 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 LINC01558Q9Y6Z2 57 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 MUC6Q6W4X9 2439 aa0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 FLG2Q5D862 2391 aaPredicted RBP0.49□□□□□ -2.33
SNORA48.1-201ENST00000390879 ZFYVE16Q7Z3T8 1539 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 PXDNQ92626 1479 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 MRC2Q9UBG0 1479 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 NRXN2Q9P2S2 1712 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 A0A0G2JND7 137 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 COX6CP09669 75 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 IGLC1P0CG04 106 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 UBE2D3P61077 147 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 UBE2D2P62837 147 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 COX17Q14061 63 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 UBE2DNLQ8IWF7 75 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 FAM223AQ8IWN6 122 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 VAMP8Q9BV40 100 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 PROK2Q9HC23 129 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 FAIMQ9NVQ4 179 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 ZNF142P52746 1687 aaPredicted RBP0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 CUL7Q14999 1698 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 RIMS1Q86UR5 1692 aaKnown RBP0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 MYO18AQ92614 2054 aaKnown RBP0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 CITO14578 2027 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 DLG5Q8TDM6 1919 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 ABCC10Q5T3U5 1492 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 SPEF2Q9C093 1822 aa0.48□□□□□ -2.33
SNORA48.1-201ENST00000390879 ROBO1Q9Y6N7 1651 aa0.47□□□□□ -2.33
SNORA48.1-201ENST00000390879 LRRC37A3O60309 1634 aa0.47□□□□□ -2.33
SNORA48.1-201ENST00000390879 AKAP11Q9UKA4 1901 aa0.47□□□□□ -2.33
SNORA48.1-201ENST00000390879 FAM223BA6NKX1 122 aa0.47□□□□□ -2.33
SNORA48.1-201ENST00000390879 ZNF815PA8K554 130 aa0.47□□□□□ -2.33
SNORA48.1-201ENST00000390879 C10orf142B7Z368 130 aa0.47□□□□□ -2.33
SNORA48.1-201ENST00000390879 FAUP35544 74 aaKnown RBP0.47□□□□□ -2.33
SNORA48.1-201ENST00000390879 SSBP3-AS1Q7Z2R9 100 aa0.47□□□□□ -2.33
SNORA48.1-201ENST00000390879 Q9H521 79 aa0.47□□□□□ -2.33
SNORA48.1-201ENST00000390879 C10orf95Q9H7T3 257 aa0.47□□□□□ -2.33
SNORA48.1-201ENST00000390879 SSC5DA1L4H1 1573 aa0.47□□□□□ -2.33
SNORA48.1-201ENST00000390879 LAMB1P07942 1786 aa0.47□□□□□ -2.33
SNORA48.1-201ENST00000390879 ZNF609O15014 1411 aa0.47□□□□□ -2.33
SNORA48.1-201ENST00000390879 VPS8Q8N3P4 1428 aa0.47□□□□□ -2.33
SNORA48.1-201ENST00000390879 ANKRD36BQ8N2N9 1353 aa0.46□□□□□ -2.34
SNORA48.1-201ENST00000390879 MYH13Q9UKX3 1938 aa0.46□□□□□ -2.34
SNORA48.1-201ENST00000390879 PLXNA2O75051 1894 aa0.46□□□□□ -2.34
SNORA48.1-201ENST00000390879 VIRMAQ69YN4 1812 aaKnown RBP0.46□□□□□ -2.34
SNORA48.1-201ENST00000390879 CNTRLQ7Z7A1 2325 aa0.46□□□□□ -2.34
SNORA48.1-201ENST00000390879 PIN1P1O15428 100 aa0.46□□□□□ -2.34
SNORA48.1-201ENST00000390879 MGPP08493 103 aa0.46□□□□□ -2.34
SNORA48.1-201ENST00000390879 ASIPP42127 132 aa0.46□□□□□ -2.34
SNORA48.1-201ENST00000390879 Q6JHZ5 121 aa0.46□□□□□ -2.34
SNORA48.1-201ENST00000390879 SPATA8Q6RVD6 105 aa0.46□□□□□ -2.34
SNORA48.1-201ENST00000390879 LINC00472Q9H8W2 130 aa0.46□□□□□ -2.34
SNORA48.1-201ENST00000390879 CRCT1Q9UGL9 99 aa0.46□□□□□ -2.34
SNORA48.1-201ENST00000390879 CACFD1Q9UGQ2 172 aa0.46□□□□□ -2.34
SNORA48.1-201ENST00000390879 MED12Q93074 2177 aa0.46□□□□□ -2.34
SNORA48.1-201ENST00000390879 CHD3Q12873 2000 aaKnown RBP0.45□□□□□ -2.34
SNORA48.1-201ENST00000390879 MYH6P13533 1939 aa0.45□□□□□ -2.34
SNORA48.1-201ENST00000390879 A0A1B0GWA3 101 aa0.45□□□□□ -2.34
SNORA48.1-201ENST00000390879 ATOX1O00244 68 aa0.45□□□□□ -2.34
SNORA48.1-201ENST00000390879 NDUFC1O43677 76 aa0.45□□□□□ -2.34
SNORA48.1-201ENST00000390879 FDCSPQ8NFU4 85 aa0.45□□□□□ -2.34
SNORA48.1-201ENST00000390879 COL6A6A6NMZ7 2263 aa0.45□□□□□ -2.34
SNORA48.1-201ENST00000390879 LAMA4Q16363 1823 aa0.45□□□□□ -2.34
SNORA48.1-201ENST00000390879 SNRNP200O75643 2136 aaKnown RBP0.44□□□□□ -2.34
SNORA48.1-201ENST00000390879 ATG2AQ2TAZ0 1938 aa0.44□□□□□ -2.34
SNORA48.1-201ENST00000390879 TEX14Q8IWB6 1497 aa0.44□□□□□ -2.34
SNORA48.1-201ENST00000390879 SHANK2Q9UPX8 1470 aa0.44□□□□□ -2.34
SNORA48.1-201ENST00000390879 AFDNP55196 1824 aaKnown RBP0.44□□□□□ -2.34
SNORA48.1-201ENST00000390879 BCE1O60756 84 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms