RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 SCGB1A1P11684 91 aa11.96□□□□□ -0.5
NKX3-1-201ENST00000380871 MT-ATP8P03928 68 aa11.95□□□□□ -0.5
NKX3-1-201ENST00000380871 IGHV1OR15-1A0A075B7D0 117 aa11.95□□□□□ -0.5
NKX3-1-201ENST00000380871 TMEM223A0PJW6 202 aa11.95□□□□□ -0.5
NKX3-1-201ENST00000380871 ZNF22P17026 224 aaPredicted RBP11.95□□□□□ -0.5
NKX3-1-201ENST00000380871 PRO1854Q9UHT4 67 aa11.95□□□□□ -0.5
NKX3-1-201ENST00000380871 CR1P17927 2039 aa11.94□□□□□ -0.5
NKX3-1-201ENST00000380871 RBMY1A1P0DJD3 496 aaKnown RBP11.94□□□□□ -0.5
NKX3-1-201ENST00000380871 RBMY1CP0DJD4 496 aa11.94□□□□□ -0.5
NKX3-1-201ENST00000380871 RBMY1FQ15415 496 aaKnown RBP11.94□□□□□ -0.5
NKX3-1-201ENST00000380871 TRPT1Q86TN4 253 aaKnown RBP11.94□□□□□ -0.5
NKX3-1-201ENST00000380871 K7EQG2 157 aa11.94□□□□□ -0.5
NKX3-1-201ENST00000380871 ELANEP08246 267 aa11.94□□□□□ -0.5
NKX3-1-201ENST00000380871 NSUN5P1Q3KNT7 163 aa11.94□□□□□ -0.5
NKX3-1-201ENST00000380871 C20orf203Q8NBC4 194 aa11.94□□□□□ -0.5
NKX3-1-201ENST00000380871 C2CD3Q4AC94 2353 aa11.93□□□□□ -0.5
NKX3-1-201ENST00000380871 XGP55808 180 aa11.93□□□□□ -0.5
NKX3-1-201ENST00000380871 JMJD1CQ15652 2540 aa11.93□□□□□ -0.5
NKX3-1-201ENST00000380871 IGLV4-3A0A075B6K6 122 aa11.93□□□□□ -0.5
NKX3-1-201ENST00000380871 RHODO00212 210 aa11.92□□□□□ -0.5
NKX3-1-201ENST00000380871 MUSTN1Q8IVN3 82 aa11.92□□□□□ -0.5
NKX3-1-201ENST00000380871 ANKRD29Q8N6D5 301 aa11.92□□□□□ -0.5
NKX3-1-201ENST00000380871 ATP6V0E2Q8NHE4 81 aa11.92□□□□□ -0.5
NKX3-1-201ENST00000380871 TEN1Q86WV5 123 aa11.92□□□□□ -0.5
NKX3-1-201ENST00000380871 SPXQ9BT56 116 aa11.92□□□□□ -0.5
NKX3-1-201ENST00000380871 UBE2E2Q96LR5 201 aa11.92□□□□□ -0.5
NKX3-1-201ENST00000380871 CIDEAO60543 219 aa11.91□□□□□ -0.5
NKX3-1-201ENST00000380871 TRAV8-3A0A0A6YYJ7 113 aa11.91□□□□□ -0.5
NKX3-1-201ENST00000380871 LEPROTO15243 131 aa11.91□□□□□ -0.5
NKX3-1-201ENST00000380871 DYNLRB2Q8TF09 96 aa11.91□□□□□ -0.5
NKX3-1-201ENST00000380871 FAM104AQ969W3 186 aa11.91□□□□□ -0.5
NKX3-1-201ENST00000380871 SPINK8P0C7L1 97 aa11.91□□□□□ -0.5
NKX3-1-201ENST00000380871 A8MZ25 164 aa11.9□□□□□ -0.5
NKX3-1-201ENST00000380871 I3L3M4 83 aa11.9□□□□□ -0.5
NKX3-1-201ENST00000380871 RHOHQ15669 191 aa11.9□□□□□ -0.5
NKX3-1-201ENST00000380871 TMEM61Q8N0U2 210 aa11.9□□□□□ -0.5
NKX3-1-201ENST00000380871 VCX2Q9H322 139 aa11.9□□□□□ -0.5
NKX3-1-201ENST00000380871 IGHV3OR16-12A0A075B7B8 117 aa11.9□□□□□ -0.5
NKX3-1-201ENST00000380871 A8MWV9 139 aa11.9□□□□□ -0.5
NKX3-1-201ENST00000380871 IGHV3-33P01772 117 aa11.9□□□□□ -0.5
NKX3-1-201ENST00000380871 CKS1BP61024 79 aa11.9□□□□□ -0.5
NKX3-1-201ENST00000380871 TMEM263Q8WUH6 116 aaKnown RBP11.9□□□□□ -0.5
NKX3-1-201ENST00000380871 PPDPFLQ8WWR9 84 aa11.9□□□□□ -0.5
NKX3-1-201ENST00000380871 AKAP9Q99996 3911 aa11.9□□□□□ -0.51
NKX3-1-201ENST00000380871 C9JAW5 83 aa11.89□□□□□ -0.51
NKX3-1-201ENST00000380871 HELZ2Q9BYK8 2649 aaKnown RBP11.89□□□□□ -0.51
NKX3-1-201ENST00000380871 Q6ZUT4 128 aa11.89□□□□□ -0.51
NKX3-1-201ENST00000380871 LYRM7Q5U5X0 104 aa11.89□□□□□ -0.51
NKX3-1-201ENST00000380871 TRBV20-1A0A075B6N2 111 aa11.88□□□□□ -0.51
NKX3-1-201ENST00000380871 A0A1B0GV72 72 aa11.88□□□□□ -0.51
NKX3-1-201ENST00000380871 ITPR2Q14571 2701 aa11.88□□□□□ -0.51
NKX3-1-201ENST00000380871 FSHBP01225 129 aa11.88□□□□□ -0.51
NKX3-1-201ENST00000380871 CD28P10747 220 aa11.88□□□□□ -0.51
NKX3-1-201ENST00000380871 NPC2P61916 151 aa11.88□□□□□ -0.51
NKX3-1-201ENST00000380871 ODF3Q96PU9 254 aa11.88□□□□□ -0.51
NKX3-1-201ENST00000380871 A0A0J9YXY3 114 aa11.87□□□□□ -0.51
NKX3-1-201ENST00000380871 IGHV3-30-3P0DP02 117 aa11.87□□□□□ -0.51
NKX3-1-201ENST00000380871 Q1RN00 199 aa11.87□□□□□ -0.51
NKX3-1-201ENST00000380871 Q6ZSN1 163 aa11.87□□□□□ -0.51
NKX3-1-201ENST00000380871 Q6ZSV7 163 aa11.87□□□□□ -0.51
NKX3-1-201ENST00000380871 SLC25A20O43772 301 aa11.87□□□□□ -0.51
NKX3-1-201ENST00000380871 CRYBA4P53673 196 aa11.87□□□□□ -0.51
NKX3-1-201ENST00000380871 SBSPONQ8IVN8 264 aa11.87□□□□□ -0.51
NKX3-1-201ENST00000380871 FASNP49327 2511 aaKnown RBP11.87□□□□□ -0.51
NKX3-1-201ENST00000380871 YAE1D1Q9NRH1 226 aa11.86□□□□□ -0.51
NKX3-1-201ENST00000380871 ERG28Q9UKR5 140 aa11.86□□□□□ -0.51
NKX3-1-201ENST00000380871 HECTD1Q9ULT8 2610 aa11.86□□□□□ -0.51
NKX3-1-201ENST00000380871 KRTAP1-3Q8IUG1 177 aa11.85□□□□□ -0.51
NKX3-1-201ENST00000380871 PRSS2P07478 247 aa11.85□□□□□ -0.51
NKX3-1-201ENST00000380871 ADAMTSL4-AS1Q5T5F5 129 aa11.85□□□□□ -0.51
NKX3-1-201ENST00000380871 TENM4Q6N022 2769 aa11.85□□□□□ -0.51
NKX3-1-201ENST00000380871 TMEM89A2RUT3 159 aa11.84□□□□□ -0.51
NKX3-1-201ENST00000380871 TIMM21Q9BVV7 248 aa11.84□□□□□ -0.51
NKX3-1-201ENST00000380871 NIPBLQ6KC79 2804 aaeCLIP11.84□□□□□ -0.51
NKX3-1-201ENST00000380871 IGHV3-38A0A0C4DH36 116 aa11.84□□□□□ -0.51
NKX3-1-201ENST00000380871 M0R2P5 195 aa11.84□□□□□ -0.51
NKX3-1-201ENST00000380871 LITAFQ99732 161 aa11.84□□□□□ -0.51
NKX3-1-201ENST00000380871 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.84□□□□□ -0.51
NKX3-1-201ENST00000380871 IGKV2-29A2NJV5 120 aaPredicted RBP11.84□□□□□ -0.51
NKX3-1-201ENST00000380871 RBMY1BA6NDE4 496 aaKnown RBP11.84□□□□□ -0.51
NKX3-1-201ENST00000380871 RBMY1EA6NEQ0 496 aaKnown RBP11.84□□□□□ -0.51
NKX3-1-201ENST00000380871 RBMY1DP0C7P1 496 aaKnown RBP11.84□□□□□ -0.51
NKX3-1-201ENST00000380871 DNAJC9-AS1A6NH13 148 aa11.83□□□□□ -0.52
NKX3-1-201ENST00000380871 ZNF469Q96JG9 3925 aaPredicted RBP11.83□□□□□ -0.52
NKX3-1-201ENST00000380871 GEMIN7Q9H840 131 aaKnown RBP11.83□□□□□ -0.52
NKX3-1-201ENST00000380871 TRGV11A0A075B6L2 103 aa11.82□□□□□ -0.52
NKX3-1-201ENST00000380871 A0A0B4J2C4 111 aa11.82□□□□□ -0.52
NKX3-1-201ENST00000380871 XCL2Q9UBD3 114 aa11.82□□□□□ -0.52
NKX3-1-201ENST00000380871 FN1P02751 2386 aaKnown RBP11.82□□□□□ -0.52
NKX3-1-201ENST00000380871 CLUHP3Q96NS8 147 aa11.82□□□□□ -0.52
NKX3-1-201ENST00000380871 LINC01587Q99440 93 aa11.82□□□□□ -0.52
NKX3-1-201ENST00000380871 TRIAP1O43715 76 aa11.82□□□□□ -0.52
NKX3-1-201ENST00000380871 ESM1Q9NQ30 184 aa11.82□□□□□ -0.52
NKX3-1-201ENST00000380871 TRAV26-1A0A087WT03 109 aa11.81□□□□□ -0.52
NKX3-1-201ENST00000380871 DAND5Q8N907 189 aa11.81□□□□□ -0.52
NKX3-1-201ENST00000380871 NTN5Q8WTR8 489 aaPredicted RBP11.81□□□□□ -0.52
NKX3-1-201ENST00000380871 PEMTQ9UBM1 199 aa11.81□□□□□ -0.52
NKX3-1-201ENST00000380871 TNFRSF18Q9Y5U5 241 aa11.81□□□□□ -0.52
NKX3-1-201ENST00000380871 HIVEP2P31629 2446 aa11.8□□□□□ -0.52
NKX3-1-201ENST00000380871 MRPS36P82909 103 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms