RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 GAGE2BQ13066 116 aa10.49□□□□□ -0.73
HMGN1-203ENST00000380748 C1orf137Q5JT78 98 aa10.49□□□□□ -0.73
HMGN1-203ENST00000380748 RASL11AQ6T310 242 aa10.49□□□□□ -0.73
HMGN1-203ENST00000380748 COTL1Q14019 142 aa10.48□□□□□ -0.73
HMGN1-203ENST00000380748 CST9LP1Q5W188 147 aa10.48□□□□□ -0.73
HMGN1-203ENST00000380748 STOML3Q8TAV4 291 aa10.48□□□□□ -0.73
HMGN1-203ENST00000380748 SMCPP49901 116 aaPredicted RBP10.47□□□□□ -0.73
HMGN1-203ENST00000380748 FER1L6-AS1Q8NA97 138 aa10.47□□□□□ -0.73
HMGN1-203ENST00000380748 DIRC1Q969H9 104 aa10.47□□□□□ -0.73
HMGN1-203ENST00000380748 TCEAL7Q9BRU2 100 aa10.47□□□□□ -0.73
HMGN1-203ENST00000380748 MLST8Q9BVC4 326 aa10.47□□□□□ -0.73
HMGN1-203ENST00000380748 IGHV1-58A0A0C4DH39 117 aa10.46□□□□□ -0.73
HMGN1-203ENST00000380748 XCL1P47992 114 aa10.46□□□□□ -0.73
HMGN1-203ENST00000380748 SYCNQ0VAF6 134 aa10.46□□□□□ -0.73
HMGN1-203ENST00000380748 RPL7L1Q6DKI1 246 aaKnown RBP10.46□□□□□ -0.73
HMGN1-203ENST00000380748 MARVELD1Q9BSK0 173 aa10.46□□□□□ -0.73
HMGN1-203ENST00000380748 TPPP3Q9BW30 176 aa10.46□□□□□ -0.73
HMGN1-203ENST00000380748 NIT2Q9NQR4 276 aa10.46□□□□□ -0.73
HMGN1-203ENST00000380748 FSIP2Q5CZC0 6907 aa10.46□□□□□ -0.74
HMGN1-203ENST00000380748 MAP1LC3B2A6NCE7 125 aa10.45□□□□□ -0.74
HMGN1-203ENST00000380748 FHITP49789 147 aa10.45□□□□□ -0.74
HMGN1-203ENST00000380748 C4orf48Q5BLP8 95 aa10.45□□□□□ -0.74
HMGN1-203ENST00000380748 AMMECR1LQ6DCA0 310 aa10.45□□□□□ -0.74
HMGN1-203ENST00000380748 PHF5AQ7RTV0 110 aaKnown RBP10.45□□□□□ -0.74
HMGN1-203ENST00000380748 MAP1LC3BQ9GZQ8 125 aa10.45□□□□□ -0.74
HMGN1-203ENST00000380748 MED28Q9H204 178 aa10.45□□□□□ -0.74
HMGN1-203ENST00000380748 LOC107984640A0A0U1RRK4 108 aa10.44□□□□□ -0.74
HMGN1-203ENST00000380748 C9orf116Q5BN46 136 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-203ENST00000380748 RNASEKQ6P5S7 137 aaKnown RBP10.44□□□□□ -0.74
HMGN1-203ENST00000380748 BAGE2Q86Y30 109 aa10.44□□□□□ -0.74
HMGN1-203ENST00000380748 IGLV1-50A0A075B6I6 118 aa10.43□□□□□ -0.74
HMGN1-203ENST00000380748 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.43□□□□□ -0.74
HMGN1-203ENST00000380748 IGKV2-29A2NJV5 120 aaPredicted RBP10.43□□□□□ -0.74
HMGN1-203ENST00000380748 H0Y9J4 135 aa10.43□□□□□ -0.74
HMGN1-203ENST00000380748 IGLV7-43P04211 117 aa10.43□□□□□ -0.74
HMGN1-203ENST00000380748 IFITM3Q01628 133 aa10.43□□□□□ -0.74
HMGN1-203ENST00000380748 SCO2A0A1W2PP80 73 aa10.42□□□□□ -0.74
HMGN1-203ENST00000380748 CCL25O15444 150 aa10.42□□□□□ -0.74
HMGN1-203ENST00000380748 UPK1BO75841 260 aa10.42□□□□□ -0.74
HMGN1-203ENST00000380748 KRTAP1-4P0C5Y4 121 aa10.42□□□□□ -0.74
HMGN1-203ENST00000380748 IGLC6P0CF74 106 aa10.42□□□□□ -0.74
HMGN1-203ENST00000380748 BCL2P10415 239 aa10.42□□□□□ -0.74
HMGN1-203ENST00000380748 AKR1C8PQ5T2L2 129 aa10.42□□□□□ -0.74
HMGN1-203ENST00000380748 Q6ZNX1 250 aa10.42□□□□□ -0.74
HMGN1-203ENST00000380748 ZNF561-AS1K7EIQ3 104 aa10.41□□□□□ -0.74
HMGN1-203ENST00000380748 PAGE4O60829 102 aa10.41□□□□□ -0.74
HMGN1-203ENST00000380748 S100A9P06702 114 aaKnown RBP10.41□□□□□ -0.74
HMGN1-203ENST00000380748 NTF3P20783 257 aa10.41□□□□□ -0.74
HMGN1-203ENST00000380748 CAMPP49913 170 aa10.41□□□□□ -0.74
HMGN1-203ENST00000380748 OR5A1Q8NGJ0 315 aa10.41□□□□□ -0.74
HMGN1-203ENST00000380748 FGF6P10767 208 aa10.4□□□□□ -0.74
HMGN1-203ENST00000380748 BORCS7-ASMTA0A0B4J1R7 106 aa10.39□□□□□ -0.75
HMGN1-203ENST00000380748 LINC00959A0A1B0GUT2 108 aa10.39□□□□□ -0.75
HMGN1-203ENST00000380748 IGLV4-69A0A075B6H9 119 aa10.38□□□□□ -0.75
HMGN1-203ENST00000380748 KRTAP11-1Q8IUC1 163 aa10.38□□□□□ -0.75
HMGN1-203ENST00000380748 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.37□□□□□ -0.75
HMGN1-203ENST00000380748 UBE2D1P51668 147 aa10.37□□□□□ -0.75
HMGN1-203ENST00000380748 MEF2BQ02080 365 aaPredicted RBP10.37□□□□□ -0.75
HMGN1-203ENST00000380748 Q5BKY6 102 aa10.37□□□□□ -0.75
HMGN1-203ENST00000380748 NUP35Q8NFH5 326 aa10.37□□□□□ -0.75
HMGN1-203ENST00000380748 ISOC2Q96AB3 205 aa10.37□□□□□ -0.75
HMGN1-203ENST00000380748 H7C423 109 aa10.36□□□□□ -0.75
HMGN1-203ENST00000380748 APOMO95445 188 aa10.36□□□□□ -0.75
HMGN1-203ENST00000380748 APCSP02743 223 aa10.36□□□□□ -0.75
HMGN1-203ENST00000380748 TRGC1P0CF51 173 aa10.36□□□□□ -0.75
HMGN1-203ENST00000380748 DEFA1P59665 94 aa10.36□□□□□ -0.75
HMGN1-203ENST00000380748 EIF5AP63241 154 aaKnown RBP10.36□□□□□ -0.75
HMGN1-203ENST00000380748 RPL18AQ02543 176 aaKnown RBP10.36□□□□□ -0.75
HMGN1-203ENST00000380748 OR2D3Q8NGH3 330 aa10.36□□□□□ -0.75
HMGN1-203ENST00000380748 S100ZQ8WXG8 99 aa10.36□□□□□ -0.75
HMGN1-203ENST00000380748 A0A087WZ39 114 aa10.35□□□□□ -0.75
HMGN1-203ENST00000380748 TRAV1-1A0A0B4J248 108 aa10.35□□□□□ -0.75
HMGN1-203ENST00000380748 NCR2O95944 276 aa10.35□□□□□ -0.75
HMGN1-203ENST00000380748 GATD1Q8NB37 220 aa10.35□□□□□ -0.75
HMGN1-203ENST00000380748 ZNF25P17030 456 aaPredicted RBP10.34□□□□□ -0.75
HMGN1-203ENST00000380748 CD164L2Q6UWJ8 174 aa10.34□□□□□ -0.75
HMGN1-203ENST00000380748 MUC17Q685J3 4493 aa10.34□□□□□ -0.75
HMGN1-203ENST00000380748 TSPAN13O95857 204 aa10.33□□□□□ -0.76
HMGN1-203ENST00000380748 RPL13AP40429 203 aaKnown RBP10.33□□□□□ -0.76
HMGN1-203ENST00000380748 RPS20P60866 119 aaKnown RBP10.33□□□□□ -0.76
HMGN1-203ENST00000380748 LYZL1Q6UWQ5 148 aa10.33□□□□□ -0.76
HMGN1-203ENST00000380748 LINC00299Q6ZSB3 139 aa10.33□□□□□ -0.76
HMGN1-203ENST00000380748 TMUB2Q71RG4 321 aa10.33□□□□□ -0.76
HMGN1-203ENST00000380748 RPL39LQ96EH5 51 aaKnown RBP10.33□□□□□ -0.76
HMGN1-203ENST00000380748 CAMK2N2Q96S95 79 aa10.33□□□□□ -0.76
HMGN1-203ENST00000380748 A0A1B0GV50 99 aa10.32□□□□□ -0.76
HMGN1-203ENST00000380748 PFDN1O60925 122 aa10.32□□□□□ -0.76
HMGN1-203ENST00000380748 RPL35P42766 123 aaKnown RBP10.32□□□□□ -0.76
HMGN1-203ENST00000380748 SS18Q15532 418 aa10.32□□□□□ -0.76
HMGN1-203ENST00000380748 TMEM101Q96IK0 257 aa10.32□□□□□ -0.76
HMGN1-203ENST00000380748 BTF3L4Q96K17 158 aa10.32□□□□□ -0.76
HMGN1-203ENST00000380748 OPRPNQ99935 248 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-203ENST00000380748 ALG5Q9Y673 324 aa10.32□□□□□ -0.76
HMGN1-203ENST00000380748 F2Z2F3 143 aa10.31□□□□□ -0.76
HMGN1-203ENST00000380748 FAM168BA1KXE4 195 aa10.3□□□□□ -0.76
HMGN1-203ENST00000380748 C19orf71A6NCJ1 209 aa10.3□□□□□ -0.76
HMGN1-203ENST00000380748 FXYD6-FXYD2A0A087WZ82 144 aa10.29□□□□□ -0.76
HMGN1-203ENST00000380748 BCL2L11O43521 198 aa10.29□□□□□ -0.76
HMGN1-203ENST00000380748 MALP21145 153 aa10.29□□□□□ -0.76
HMGN1-203ENST00000380748 EIF5AL1Q6IS14 154 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms