RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 KIAA1549Q9HCM3 1950 aa9.44□□□□□ -0.9
CHD3-203ENST00000380358 COL5A3P25940 1745 aaPredicted RBP9.44□□□□□ -0.9
CHD3-203ENST00000380358 IGLV11-55A0A075B6I3 123 aa9.44□□□□□ -0.9
CHD3-203ENST00000380358 PLA2G2CQ5R387 149 aa9.44□□□□□ -0.9
CHD3-203ENST00000380358 A0A0G2JMZ2 1700 aa9.44□□□□□ -0.9
CHD3-203ENST00000380358 LRRC37A2A6NM11 1700 aa9.44□□□□□ -0.9
CHD3-203ENST00000380358 KIF26AQ9ULI4 1882 aaPredicted RBP9.44□□□□□ -0.9
CHD3-203ENST00000380358 PROK1P58294 105 aa9.44□□□□□ -0.9
CHD3-203ENST00000380358 COL24A1Q17RW2 1714 aa9.43□□□□□ -0.9
CHD3-203ENST00000380358 SIVA1O15304 175 aa9.43□□□□□ -0.9
CHD3-203ENST00000380358 PRM2P04554 102 aa9.43□□□□□ -0.9
CHD3-203ENST00000380358 Q6Q795 121 aa9.43□□□□□ -0.9
CHD3-203ENST00000380358 Q8N976 141 aa9.43□□□□□ -0.9
CHD3-203ENST00000380358 LINC00467Q9BRT7 94 aa9.43□□□□□ -0.9
CHD3-203ENST00000380358 PLAC8L1A1L4L8 177 aa9.43□□□□□ -0.9
CHD3-203ENST00000380358 NDUFA11Q86Y39 141 aa9.43□□□□□ -0.9
CHD3-203ENST00000380358 TOMM6Q96B49 74 aa9.43□□□□□ -0.9
CHD3-203ENST00000380358 LY6G6DO95868 133 aa9.42□□□□□ -0.9
CHD3-203ENST00000380358 G3V4G9 280 aa9.42□□□□□ -0.9
CHD3-203ENST00000380358 E7EUB6 86 aa9.42□□□□□ -0.9
CHD3-203ENST00000380358 CCKP06307 115 aa9.42□□□□□ -0.9
CHD3-203ENST00000380358 NUPR1O60356 82 aa9.41□□□□□ -0.9
CHD3-203ENST00000380358 UFSP1Q6NVU6 142 aa9.41□□□□□ -0.9
CHD3-203ENST00000380358 C19orf84I3L1E1 186 aa9.41□□□□□ -0.9
CHD3-203ENST00000380358 IGLV2-14P01704 120 aa9.41□□□□□ -0.9
CHD3-203ENST00000380358 C10orf99Q6UWK7 81 aa9.41□□□□□ -0.9
CHD3-203ENST00000380358 C11orf53Q8IXP5 236 aa9.41□□□□□ -0.9
CHD3-203ENST00000380358 CLUHP3Q96NS8 147 aa9.41□□□□□ -0.9
CHD3-203ENST00000380358 BBC3Q96PG8 261 aaPredicted RBP9.41□□□□□ -0.9
CHD3-203ENST00000380358 NLRC5Q86WI3 1866 aa9.4□□□□□ -0.9
CHD3-203ENST00000380358 A6NDX4 124 aa9.4□□□□□ -0.9
CHD3-203ENST00000380358 H3BQ85 93 aa9.4□□□□□ -0.9
CHD3-203ENST00000380358 Q8N7P7 452 aa9.4□□□□□ -0.9
CHD3-203ENST00000380358 SPANXDQ9BXN6 97 aa9.4□□□□□ -0.91
CHD3-203ENST00000380358 SPG11Q96JI7 2443 aa9.4□□□□□ -0.91
CHD3-203ENST00000380358 RSPO1Q2MKA7 263 aaPredicted RBP9.4□□□□□ -0.91
CHD3-203ENST00000380358 SMR3AQ99954 134 aa9.39□□□□□ -0.91
CHD3-203ENST00000380358 LOC100131303A0A0U1RQF7 123 aa9.39□□□□□ -0.91
CHD3-203ENST00000380358 NUPR2A6NF83 97 aa9.39□□□□□ -0.91
CHD3-203ENST00000380358 FAM208BQ5VWN6 2430 aa9.39□□□□□ -0.91
CHD3-203ENST00000380358 PATE2Q6UY27 113 aa9.39□□□□□ -0.91
CHD3-203ENST00000380358 OXLD1Q5BKU9 147 aa9.39□□□□□ -0.91
CHD3-203ENST00000380358 PIP4P1Q86T03 277 aa9.39□□□□□ -0.91
CHD3-203ENST00000380358 PLA2G5P39877 138 aa9.39□□□□□ -0.91
CHD3-203ENST00000380358 ZSWIM8A7E2V4 1837 aa9.38□□□□□ -0.91
CHD3-203ENST00000380358 Q8N9L7 120 aa9.38□□□□□ -0.91
CHD3-203ENST00000380358 WISP2O76076 250 aa9.38□□□□□ -0.91
CHD3-203ENST00000380358 OBSL1O75147 1896 aa9.38□□□□□ -0.91
CHD3-203ENST00000380358 A8MZ25 164 aa9.38□□□□□ -0.91
CHD3-203ENST00000380358 DAZAP2Q15038 168 aaPredicted RBP9.38□□□□□ -0.91
CHD3-203ENST00000380358 TMEM89A2RUT3 159 aa9.38□□□□□ -0.91
CHD3-203ENST00000380358 ODF3L1Q8IXM7 274 aa9.38□□□□□ -0.91
CHD3-203ENST00000380358 WDR90Q96KV7 1748 aa9.38□□□□□ -0.91
CHD3-203ENST00000380358 LENEPQ9Y5L5 61 aa9.38□□□□□ -0.91
CHD3-203ENST00000380358 TCL1BO95988 128 aa9.37□□□□□ -0.91
CHD3-203ENST00000380358 OTOGLQ3ZCN5 2332 aa9.37□□□□□ -0.91
CHD3-203ENST00000380358 INSL3P51460 131 aa9.37□□□□□ -0.91
CHD3-203ENST00000380358 THSD7AQ9UPZ6 1657 aa9.37□□□□□ -0.91
CHD3-203ENST00000380358 PLXNB1O43157 2135 aa9.37□□□□□ -0.91
CHD3-203ENST00000380358 C18orf65Q6ZTR6 163 aa9.37□□□□□ -0.91
CHD3-203ENST00000380358 SYCNQ0VAF6 134 aa9.36□□□□□ -0.91
CHD3-203ENST00000380358 A0A0J9YX75 114 aa9.36□□□□□ -0.91
CHD3-203ENST00000380358 ARHGAP32A7KAX9 2087 aa9.36□□□□□ -0.91
CHD3-203ENST00000380358 IL15RAQ13261 267 aa9.36□□□□□ -0.91
CHD3-203ENST00000380358 CELA1Q9UNI1 258 aa9.36□□□□□ -0.91
CHD3-203ENST00000380358 FRMD6-AS1P0C7T7 363 aa9.35□□□□□ -0.91
CHD3-203ENST00000380358 KPRPQ5T749 579 aaPredicted RBP9.35□□□□□ -0.91
CHD3-203ENST00000380358 IGLC6P0CF74 106 aa9.35□□□□□ -0.91
CHD3-203ENST00000380358 ODF1Q14990 250 aa9.35□□□□□ -0.91
CHD3-203ENST00000380358 PLXNA3P51805 1871 aa9.35□□□□□ -0.91
CHD3-203ENST00000380358 ESRGQ1W209 222 aa9.35□□□□□ -0.91
CHD3-203ENST00000380358 SERTAD4-AS1Q5TG53 156 aa9.35□□□□□ -0.91
CHD3-203ENST00000380358 DSCAMO60469 2012 aa9.35□□□□□ -0.91
CHD3-203ENST00000380358 C6orf99Q4VX62 202 aa9.35□□□□□ -0.91
CHD3-203ENST00000380358 SONP18583 2426 aaKnown RBP9.35□□□□□ -0.91
CHD3-203ENST00000380358 E9PLD3 99 aa9.34□□□□□ -0.91
CHD3-203ENST00000380358 GDF5OSQ5U4N7 250 aa9.34□□□□□ -0.91
CHD3-203ENST00000380358 MIAQ16674 131 aa9.34□□□□□ -0.91
CHD3-203ENST00000380358 TRAV10A0A0B4J240 114 aa9.34□□□□□ -0.91
CHD3-203ENST00000380358 CRIPAKQ8N1N5 446 aa9.34□□□□□ -0.91
CHD3-203ENST00000380358 ZNF106Q9H2Y7 1883 aaKnown RBP9.34□□□□□ -0.91
CHD3-203ENST00000380358 CDKN2A-AS1Q9UH64 79 aa9.33□□□□□ -0.92
CHD3-203ENST00000380358 IGHV6-1A0A0B4J1U7 121 aa9.33□□□□□ -0.92
CHD3-203ENST00000380358 A0A0J9YXY3 114 aa9.33□□□□□ -0.92
CHD3-203ENST00000380358 FAM240AA0A1B0GVK7 77 aa9.33□□□□□ -0.92
CHD3-203ENST00000380358 SHISA2Q6UWI4 295 aa9.33□□□□□ -0.92
CHD3-203ENST00000380358 DEFB116Q30KQ4 102 aa9.33□□□□□ -0.92
CHD3-203ENST00000380358 EXPH5Q8NEV8 1989 aa9.33□□□□□ -0.92
CHD3-203ENST00000380358 IGLV5-52A0A0A0MRZ9 124 aa9.32□□□□□ -0.92
CHD3-203ENST00000380358 HIVEP2P31629 2446 aa9.32□□□□□ -0.92
CHD3-203ENST00000380358 SPATA12Q7Z6I5 190 aa9.32□□□□□ -0.92
CHD3-203ENST00000380358 MGAMO43451 1857 aa9.32□□□□□ -0.92
CHD3-203ENST00000380358 C20orf173Q96LM9 149 aa9.32□□□□□ -0.92
CHD3-203ENST00000380358 C1orf147Q96MC9 270 aaPredicted RBP9.32□□□□□ -0.92
CHD3-203ENST00000380358 TRBV27A0A0K0K1C4 114 aa9.32□□□□□ -0.92
CHD3-203ENST00000380358 TMEM223A0PJW6 202 aa9.32□□□□□ -0.92
CHD3-203ENST00000380358 PLXNA4Q9HCM2 1894 aa9.32□□□□□ -0.92
CHD3-203ENST00000380358 NCOR1P1Q9H4R4 102 aa9.31□□□□□ -0.92
CHD3-203ENST00000380358 BRI3O95415 125 aa9.31□□□□□ -0.92
CHD3-203ENST00000380358 NDUFC2-KCTD14E9PQ53 114 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms