RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 C2orf66Q6UXQ4 117 aa17.25■□□□□ 0.35
ECHDC3-201ENST00000379215 NHLRC4P0CG21 123 aaPredicted RBP17.25■□□□□ 0.35
ECHDC3-201ENST00000379215 GYPEP15421 78 aa17.25■□□□□ 0.35
ECHDC3-201ENST00000379215 KRTDAPP60985 99 aa17.25■□□□□ 0.35
ECHDC3-201ENST00000379215 TMEM97Q5BJF2 176 aa17.25■□□□□ 0.35
ECHDC3-201ENST00000379215 PHLDA1Q8WV24 401 aaPredicted RBP17.25■□□□□ 0.35
ECHDC3-201ENST00000379215 SMIM6P0DI80 62 aa17.23■□□□□ 0.35
ECHDC3-201ENST00000379215 HTN3P15516 51 aa17.23■□□□□ 0.35
ECHDC3-201ENST00000379215 GTSF1LQ9H1H1 148 aa17.23■□□□□ 0.35
ECHDC3-201ENST00000379215 IGHV3-38A0A0C4DH36 116 aa17.22■□□□□ 0.35
ECHDC3-201ENST00000379215 LOC100131303A0A0U1RQF7 123 aa17.22■□□□□ 0.35
ECHDC3-201ENST00000379215 C3orf79P0CE67 100 aa17.22■□□□□ 0.35
ECHDC3-201ENST00000379215 JOSD1Q15040 202 aaPredicted RBP17.22■□□□□ 0.35
ECHDC3-201ENST00000379215 IFI27L1Q96BM0 104 aa17.22■□□□□ 0.35
ECHDC3-201ENST00000379215 SH2D6Q7Z4S9 175 aa17.21■□□□□ 0.35
ECHDC3-201ENST00000379215 C20orf203Q8NBC4 194 aa17.21■□□□□ 0.35
ECHDC3-201ENST00000379215 TRAV26-1A0A087WT03 109 aa17.21■□□□□ 0.35
ECHDC3-201ENST00000379215 Q6ZTC4 211 aa17.21■□□□□ 0.35
ECHDC3-201ENST00000379215 SCGB3A1Q96QR1 104 aa17.21■□□□□ 0.35
ECHDC3-201ENST00000379215 H3BNG1 76 aa17.2■□□□□ 0.34
ECHDC3-201ENST00000379215 VSIG2Q96IQ7 327 aa17.2■□□□□ 0.34
ECHDC3-201ENST00000379215 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.19■□□□□ 0.34
ECHDC3-201ENST00000379215 SYS1-DBNDD2H3BUS1 97 aa17.19■□□□□ 0.34
ECHDC3-201ENST00000379215 DEFA6Q01524 100 aa17.19■□□□□ 0.34
ECHDC3-201ENST00000379215 LINC00173Q6ZV60 143 aa17.19■□□□□ 0.34
ECHDC3-201ENST00000379215 ERASQ7Z444 233 aa17.19■□□□□ 0.34
ECHDC3-201ENST00000379215 C20orf202A1L168 122 aa17.18■□□□□ 0.34
ECHDC3-201ENST00000379215 PET117Q6UWS5 81 aa17.18■□□□□ 0.34
ECHDC3-201ENST00000379215 ATP6V0E2Q8NHE4 81 aa17.18■□□□□ 0.34
ECHDC3-201ENST00000379215 A0A0J9YY99 117 aa17.18■□□□□ 0.34
ECHDC3-201ENST00000379215 NANOS2P60321 138 aaKnown RBP17.18■□□□□ 0.34
ECHDC3-201ENST00000379215 SMAGPQ0VAQ4 97 aa17.18■□□□□ 0.34
ECHDC3-201ENST00000379215 MRPL23Q16540 153 aaKnown RBP17.18■□□□□ 0.34
ECHDC3-201ENST00000379215 PYY3Q5JQD4 70 aa17.18■□□□□ 0.34
ECHDC3-201ENST00000379215 SPATA12Q7Z6I5 190 aa17.18■□□□□ 0.34
ECHDC3-201ENST00000379215 DEFB104AQ8WTQ1 72 aa17.18■□□□□ 0.34
ECHDC3-201ENST00000379215 TMEM141Q96I45 108 aa17.18■□□□□ 0.34
ECHDC3-201ENST00000379215 TIMM17AQ99595 171 aa17.18■□□□□ 0.34
ECHDC3-201ENST00000379215 ICOSQ9Y6W8 199 aa17.18■□□□□ 0.34
ECHDC3-201ENST00000379215 SCGB1D1O95968 90 aa17.17■□□□□ 0.34
ECHDC3-201ENST00000379215 CHCHD7Q9BUK0 85 aa17.17■□□□□ 0.34
ECHDC3-201ENST00000379215 TRBV25-1A0A075B6N4 114 aa17.15■□□□□ 0.34
ECHDC3-201ENST00000379215 NPSP0C0P6 89 aa17.15■□□□□ 0.34
ECHDC3-201ENST00000379215 Q6ZN92 141 aa17.15■□□□□ 0.34
ECHDC3-201ENST00000379215 RPL39P62891 51 aaKnown RBP17.14■□□□□ 0.33
ECHDC3-201ENST00000379215 PYGO1Q9Y3Y4 419 aa17.14■□□□□ 0.33
ECHDC3-201ENST00000379215 DEFB131BA0A096LNP1 70 aa17.14■□□□□ 0.33
ECHDC3-201ENST00000379215 TRAV10A0A0B4J240 114 aa17.14■□□□□ 0.33
ECHDC3-201ENST00000379215 SPANXA1Q9NS26 97 aa17.14■□□□□ 0.33
ECHDC3-201ENST00000379215 IGIPA6NJ69 53 aa17.13■□□□□ 0.33
ECHDC3-201ENST00000379215 H7C423 109 aa17.13■□□□□ 0.33
ECHDC3-201ENST00000379215 PAPPA-AS1Q5QFB9 102 aa17.13■□□□□ 0.33
ECHDC3-201ENST00000379215 TMEM243Q9BU79 118 aa17.13■□□□□ 0.33
ECHDC3-201ENST00000379215 TRBV6-8A0A0A6YYG3 113 aa17.12■□□□□ 0.33
ECHDC3-201ENST00000379215 PRSS1P07477 247 aa17.12■□□□□ 0.33
ECHDC3-201ENST00000379215 NTM-AS1Q6ZSK4 140 aa17.12■□□□□ 0.33
ECHDC3-201ENST00000379215 TENM3Q9P273 2699 aa17.11■□□□□ 0.33
ECHDC3-201ENST00000379215 TIMM21Q9BVV7 248 aa17.1■□□□□ 0.33
ECHDC3-201ENST00000379215 H0Y8G0 127 aa17.1■□□□□ 0.33
ECHDC3-201ENST00000379215 UBE2L6O14933 153 aa17.1■□□□□ 0.33
ECHDC3-201ENST00000379215 LINC01545Q5VT33 79 aa17.1■□□□□ 0.33
ECHDC3-201ENST00000379215 LGALS9CQ6DKI2 356 aa17.1■□□□□ 0.33
ECHDC3-201ENST00000379215 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.09■□□□□ 0.33
ECHDC3-201ENST00000379215 TRAV12-1A0A0B4J245 112 aa17.09■□□□□ 0.33
ECHDC3-201ENST00000379215 IGKV2-29A2NJV5 120 aaPredicted RBP17.09■□□□□ 0.33
ECHDC3-201ENST00000379215 HUWE1Q7Z6Z7 4374 aaKnown RBP17.09■□□□□ 0.33
ECHDC3-201ENST00000379215 LINC00518Q8N0U6 118 aa17.08■□□□□ 0.32
ECHDC3-201ENST00000379215 Q8N976 141 aa17.08■□□□□ 0.32
ECHDC3-201ENST00000379215 UBE2D4Q9Y2X8 147 aa17.08■□□□□ 0.32
ECHDC3-201ENST00000379215 A0A096LPF7 62 aa17.07■□□□□ 0.32
ECHDC3-201ENST00000379215 BAALCQ8WXS3 180 aa17.07■□□□□ 0.32
ECHDC3-201ENST00000379215 C12orf57Q99622 126 aa17.07■□□□□ 0.32
ECHDC3-201ENST00000379215 MRPL52Q86TS9 123 aaKnown RBP17.07■□□□□ 0.32
ECHDC3-201ENST00000379215 CSDC2Q9Y534 153 aaKnown RBP17.07■□□□□ 0.32
ECHDC3-201ENST00000379215 ZNF25P17030 456 aaPredicted RBP17.05■□□□□ 0.32
ECHDC3-201ENST00000379215 TIRAPP58753 221 aa17.05■□□□□ 0.32
ECHDC3-201ENST00000379215 DGAT2L7PQ6IED9 249 aa17.05■□□□□ 0.32
ECHDC3-201ENST00000379215 A0A087WX48 190 aa17.04■□□□□ 0.32
ECHDC3-201ENST00000379215 S100A12P80511 92 aa17.04■□□□□ 0.32
ECHDC3-201ENST00000379215 MRPS36P82909 103 aaKnown RBP17.04■□□□□ 0.32
ECHDC3-201ENST00000379215 PMVKQ15126 192 aa17.04■□□□□ 0.32
ECHDC3-201ENST00000379215 IGLV4-3A0A075B6K6 122 aa17.03■□□□□ 0.32
ECHDC3-201ENST00000379215 FGF6P10767 208 aa17.03■□□□□ 0.32
ECHDC3-201ENST00000379215 ODF1Q14990 250 aa17.03■□□□□ 0.32
ECHDC3-201ENST00000379215 AMMECR1LQ6DCA0 310 aa17.03■□□□□ 0.32
ECHDC3-201ENST00000379215 C15orf53Q8NAA6 179 aa17.03■□□□□ 0.32
ECHDC3-201ENST00000379215 CHCHD5Q9BSY4 110 aa17.03■□□□□ 0.32
ECHDC3-201ENST00000379215 PKIAP61925 76 aa17.03■□□□□ 0.32
ECHDC3-201ENST00000379215 TEX43Q6ZNM6 134 aa17.03■□□□□ 0.32
ECHDC3-201ENST00000379215 TMEM101Q96IK0 257 aa17.03■□□□□ 0.32
ECHDC3-201ENST00000379215 VCX2Q9H322 139 aa17.03■□□□□ 0.32
ECHDC3-201ENST00000379215 DNAH9Q9NYC9 4486 aa17.03■□□□□ 0.32
ECHDC3-201ENST00000379215 LELP1Q5T871 98 aa17.01■□□□□ 0.31
ECHDC3-201ENST00000379215 F8VRH5 84 aa17■□□□□ 0.31
ECHDC3-201ENST00000379215 OR5A1Q8NGJ0 315 aa17■□□□□ 0.31
ECHDC3-201ENST00000379215 PRSS29PA6NIE9 313 aa16.99■□□□□ 0.31
ECHDC3-201ENST00000379215 CST9LQ9H4G1 147 aa16.99■□□□□ 0.31
ECHDC3-201ENST00000379215 CHTOPQ9Y3Y2 248 aaKnown RBP16.99■□□□□ 0.31
ECHDC3-201ENST00000379215 PLNP26678 52 aa16.99■□□□□ 0.31
ECHDC3-201ENST00000379215 AMELXQ99217 191 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms