RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 RAB19A4D1S5 217 aa11.09□□□□□ -0.63
HLA-A-201ENST00000376802 RPS20P60866 119 aaKnown RBP11.09□□□□□ -0.63
HLA-A-201ENST00000376802 CACNG7P62955 275 aa11.09□□□□□ -0.63
HLA-A-201ENST00000376802 CLLU1Q5K131 121 aa11.09□□□□□ -0.63
HLA-A-201ENST00000376802 PGLYRP4Q96LB8 373 aa11.09□□□□□ -0.63
HLA-A-201ENST00000376802 CHTF8P0CG12 524 aa11.08□□□□□ -0.64
HLA-A-201ENST00000376802 RAB14P61106 215 aa11.08□□□□□ -0.64
HLA-A-201ENST00000376802 Q6ZRU5 148 aa11.08□□□□□ -0.64
HLA-A-201ENST00000376802 NIT2Q9NQR4 276 aa11.08□□□□□ -0.64
HLA-A-201ENST00000376802 TRBV20OR9-2A0A075B6H5 130 aa11.07□□□□□ -0.64
HLA-A-201ENST00000376802 IGHV3-64A0A075B6Q5 118 aa11.07□□□□□ -0.64
HLA-A-201ENST00000376802 A0A087WYN8 130 aa11.07□□□□□ -0.64
HLA-A-201ENST00000376802 F2Z2F3 143 aa11.07□□□□□ -0.64
HLA-A-201ENST00000376802 LYZL1Q6UWQ5 148 aa11.07□□□□□ -0.64
HLA-A-201ENST00000376802 NTF3P20783 257 aa11.06□□□□□ -0.64
HLA-A-201ENST00000376802 SPACA4Q8TDM5 124 aa11.06□□□□□ -0.64
HLA-A-201ENST00000376802 SMIM12Q96EX1 92 aa11.06□□□□□ -0.64
HLA-A-201ENST00000376802 DPH3P1Q9H4G8 78 aa11.06□□□□□ -0.64
HLA-A-201ENST00000376802 GNG4P50150 75 aa11.05□□□□□ -0.64
HLA-A-201ENST00000376802 C15orf56Q8N910 161 aa11.05□□□□□ -0.64
HLA-A-201ENST00000376802 RNF185Q96GF1 192 aa11.05□□□□□ -0.64
HLA-A-201ENST00000376802 AP5S1Q9NUS5 200 aa11.05□□□□□ -0.64
HLA-A-201ENST00000376802 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.04□□□□□ -0.64
HLA-A-201ENST00000376802 TRGC1P0CF51 173 aa11.04□□□□□ -0.64
HLA-A-201ENST00000376802 BLOC1S1P78537 153 aa11.04□□□□□ -0.64
HLA-A-201ENST00000376802 DPH3Q96FX2 82 aa11.04□□□□□ -0.64
HLA-A-201ENST00000376802 XKRY2A2RUG3 117 aa11.03□□□□□ -0.64
HLA-A-201ENST00000376802 IFNA1P01562 189 aa11.03□□□□□ -0.64
HLA-A-201ENST00000376802 CTRLP40313 264 aa11.03□□□□□ -0.64
HLA-A-201ENST00000376802 MEF2BQ02080 365 aaPredicted RBP11.03□□□□□ -0.64
HLA-A-201ENST00000376802 NDUFA5Q16718 116 aa11.03□□□□□ -0.64
HLA-A-201ENST00000376802 PLAC8Q9NZF1 115 aa11.03□□□□□ -0.64
HLA-A-201ENST00000376802 AMTP48728 403 aa11.02□□□□□ -0.65
HLA-A-201ENST00000376802 COTL1Q14019 142 aa11.02□□□□□ -0.65
HLA-A-201ENST00000376802 WDR73Q6P4I2 378 aa11.02□□□□□ -0.65
HLA-A-201ENST00000376802 NUDT10Q8NFP7 164 aa11.02□□□□□ -0.65
HLA-A-201ENST00000376802 NUDT11Q96G61 164 aa11.02□□□□□ -0.65
HLA-A-201ENST00000376802 CNFNQ9BYD5 112 aa11.02□□□□□ -0.65
HLA-A-201ENST00000376802 MED9Q9NWA0 146 aa11.02□□□□□ -0.65
HLA-A-201ENST00000376802 GAGE12HA6NDE8 117 aa11.01□□□□□ -0.65
HLA-A-201ENST00000376802 UBE2L6O14933 153 aa11.01□□□□□ -0.65
HLA-A-201ENST00000376802 PDE6DO43924 150 aa11.01□□□□□ -0.65
HLA-A-201ENST00000376802 GATD1Q8NB37 220 aa11.01□□□□□ -0.65
HLA-A-201ENST00000376802 LYPD6BQ8NI32 183 aa11.01□□□□□ -0.65
HLA-A-201ENST00000376802 LINC00862A6NCI5 91 aa11□□□□□ -0.65
HLA-A-201ENST00000376802 PHOX2AO14813 284 aa11□□□□□ -0.65
HLA-A-201ENST00000376802 COX6A2Q02221 97 aa11□□□□□ -0.65
HLA-A-201ENST00000376802 TRAV26-2A0A0B4J265 109 aa10.99□□□□□ -0.65
HLA-A-201ENST00000376802 TWIST1Q15672 202 aa10.99□□□□□ -0.65
HLA-A-201ENST00000376802 IGKV3OR2-268A0A0C4DH90 116 aa10.98□□□□□ -0.65
HLA-A-201ENST00000376802 TEX46H3BTG2 121 aa10.98□□□□□ -0.65
HLA-A-201ENST00000376802 RPS10P46783 165 aaKnown RBP10.98□□□□□ -0.65
HLA-A-201ENST00000376802 PRSS3P2Q8NHM4 247 aa10.98□□□□□ -0.65
HLA-A-201ENST00000376802 BIN3Q9NQY0 253 aa10.98□□□□□ -0.65
HLA-A-201ENST00000376802 TNXBP22105 4242 aa10.97□□□□□ -0.65
HLA-A-201ENST00000376802 BCL2P10415 239 aa10.97□□□□□ -0.65
HLA-A-201ENST00000376802 HIGD2BQ4VC39 106 aa10.97□□□□□ -0.65
HLA-A-201ENST00000376802 CFAP161Q6P656 301 aa10.97□□□□□ -0.65
HLA-A-201ENST00000376802 CHCHD10Q8WYQ3 142 aaPredicted RBP10.97□□□□□ -0.65
HLA-A-201ENST00000376802 RPL39LQ96EH5 51 aaKnown RBP10.97□□□□□ -0.65
HLA-A-201ENST00000376802 RNASE7Q9H1E1 156 aaKnown RBP10.97□□□□□ -0.65
HLA-A-201ENST00000376802 K7EN84 100 aa10.96□□□□□ -0.65
HLA-A-201ENST00000376802 FOXA3P55318 350 aaPredicted RBP10.96□□□□□ -0.65
HLA-A-201ENST00000376802 RPP21Q9H633 154 aaKnown RBP10.96□□□□□ -0.65
HLA-A-201ENST00000376802 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.95□□□□□ -0.66
HLA-A-201ENST00000376802 IGKV2-29A2NJV5 120 aaPredicted RBP10.95□□□□□ -0.66
HLA-A-201ENST00000376802 NDUFS6O75380 124 aaKnown RBP10.95□□□□□ -0.66
HLA-A-201ENST00000376802 OCC1Q8TAD7 63 aa10.95□□□□□ -0.66
HLA-A-201ENST00000376802 GTSF1Q8WW33 167 aa10.95□□□□□ -0.66
HLA-A-201ENST00000376802 GVQW2A0A096LPI5 108 aaPredicted RBP10.94□□□□□ -0.66
HLA-A-201ENST00000376802 NCR2O95944 276 aa10.94□□□□□ -0.66
HLA-A-201ENST00000376802 MAJINQ3KP22 176 aa10.94□□□□□ -0.66
HLA-A-201ENST00000376802 C7orf33Q8WU49 177 aa10.94□□□□□ -0.66
HLA-A-201ENST00000376802 IGKV2-24A0A0C4DH68 120 aa10.93□□□□□ -0.66
HLA-A-201ENST00000376802 H7C423 109 aa10.93□□□□□ -0.66
HLA-A-201ENST00000376802 FGF6P10767 208 aa10.93□□□□□ -0.66
HLA-A-201ENST00000376802 FOXI1Q12951 378 aa10.93□□□□□ -0.66
HLA-A-201ENST00000376802 AMMECR1LQ6DCA0 310 aa10.93□□□□□ -0.66
HLA-A-201ENST00000376802 A0A096LNI7 61 aa10.92□□□□□ -0.66
HLA-A-201ENST00000376802 FAM231BA6NCW3 169 aa10.92□□□□□ -0.66
HLA-A-201ENST00000376802 PRR3P79522 188 aaKnown RBP10.92□□□□□ -0.66
HLA-A-201ENST00000376802 RNASEKQ6P5S7 137 aaKnown RBP10.92□□□□□ -0.66
HLA-A-201ENST00000376802 COMMD7Q86VX2 200 aa10.92□□□□□ -0.66
HLA-A-201ENST00000376802 STPG4Q8N801 248 aa10.92□□□□□ -0.66
HLA-A-201ENST00000376802 LINC01600Q96MT4 127 aa10.92□□□□□ -0.66
HLA-A-201ENST00000376802 FAM210AQ96ND0 272 aa10.92□□□□□ -0.66
HLA-A-201ENST00000376802 SDHAF1A6NFY7 115 aa10.91□□□□□ -0.66
HLA-A-201ENST00000376802 APCSP02743 223 aa10.91□□□□□ -0.66
HLA-A-201ENST00000376802 TAGLN2P37802 199 aaKnown RBP10.91□□□□□ -0.66
HLA-A-201ENST00000376802 UQCC3Q6UW78 93 aa10.91□□□□□ -0.66
HLA-A-201ENST00000376802 LRP2P98164 4655 aa10.91□□□□□ -0.66
HLA-A-201ENST00000376802 GAS8-AS1O95177 125 aa10.89□□□□□ -0.67
HLA-A-201ENST00000376802 ODF1Q14990 250 aa10.89□□□□□ -0.67
HLA-A-201ENST00000376802 OR5A1Q8NGJ0 315 aa10.89□□□□□ -0.67
HLA-A-201ENST00000376802 SMDT1Q9H4I9 107 aa10.89□□□□□ -0.67
HLA-A-201ENST00000376802 LINC00959A0A1B0GUT2 108 aa10.88□□□□□ -0.67
HLA-A-201ENST00000376802 ESDP10768 282 aa10.88□□□□□ -0.67
HLA-A-201ENST00000376802 ZNF25P17030 456 aaPredicted RBP10.88□□□□□ -0.67
HLA-A-201ENST00000376802 SLC7A5P1Q8MH63 180 aa10.88□□□□□ -0.67
HLA-A-201ENST00000376802 LINC00526Q96FQ7 95 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 1647.6 ms