RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 RNASE8Q8TDE3 154 aaKnown RBP15.65■□□□□ 0.1
RNF39-202ENST00000376751 FAM104AQ969W3 186 aa15.65■□□□□ 0.1
RNF39-202ENST00000376751 K7ERJ3 54 aa15.64■□□□□ 0.09
RNF39-202ENST00000376751 TRBV7-3A0A075B6L6 115 aa15.62■□□□□ 0.09
RNF39-202ENST00000376751 ZNF815PA8K554 130 aa15.62■□□□□ 0.09
RNF39-202ENST00000376751 H3BUT2 72 aa15.62■□□□□ 0.09
RNF39-202ENST00000376751 TSPEAR-AS2P59090 65 aa15.62■□□□□ 0.09
RNF39-202ENST00000376751 PLEKHB2Q96CS7 222 aa15.62■□□□□ 0.09
RNF39-202ENST00000376751 TRGV1A0A0A0MS02 117 aa15.62■□□□□ 0.09
RNF39-202ENST00000376751 TAL2Q16559 108 aa15.62■□□□□ 0.09
RNF39-202ENST00000376751 TMEM170BQ5T4T1 132 aa15.62■□□□□ 0.09
RNF39-202ENST00000376751 NFE4Q86UQ8 179 aa15.62■□□□□ 0.09
RNF39-202ENST00000376751 CHCHD7Q9BUK0 85 aa15.62■□□□□ 0.09
RNF39-202ENST00000376751 NSD1Q96L73 2696 aaPredicted RBP15.62■□□□□ 0.09
RNF39-202ENST00000376751 RPL35AP18077 110 aaKnown RBP15.61■□□□□ 0.09
RNF39-202ENST00000376751 CMC4P56277 68 aaPredicted RBP15.61■□□□□ 0.09
RNF39-202ENST00000376751 HERVK_113P61574 105 aa15.6■□□□□ 0.09
RNF39-202ENST00000376751 CEMP1Q6PRD7 247 aaPredicted RBP15.6■□□□□ 0.09
RNF39-202ENST00000376751 OR4C5Q8NGB2 326 aa15.6■□□□□ 0.09
RNF39-202ENST00000376751 PHLDA1Q8WV24 401 aaPredicted RBP15.6■□□□□ 0.09
RNF39-202ENST00000376751 HIST1H4GQ99525 98 aa15.6■□□□□ 0.09
RNF39-202ENST00000376751 IGHV3-38A0A0C4DH36 116 aa15.6■□□□□ 0.09
RNF39-202ENST00000376751 SMIM13P0DJ93 91 aa15.6■□□□□ 0.09
RNF39-202ENST00000376751 Q6ZTI0 123 aa15.6■□□□□ 0.09
RNF39-202ENST00000376751 FAM110AQ9BQ89 295 aa15.6■□□□□ 0.09
RNF39-202ENST00000376751 C2CD3Q4AC94 2353 aa15.6■□□□□ 0.09
RNF39-202ENST00000376751 TMEM263Q8WUH6 116 aaKnown RBP15.59■□□□□ 0.09
RNF39-202ENST00000376751 NHP2Q9NX24 153 aaKnown RBP15.59■□□□□ 0.09
RNF39-202ENST00000376751 PYGO1Q9Y3Y4 419 aa15.59■□□□□ 0.09
RNF39-202ENST00000376751 ZNF479Q96JC4 524 aa15.58■□□□□ 0.09
RNF39-202ENST00000376751 DNAJC30Q96LL9 226 aa15.58■□□□□ 0.09
RNF39-202ENST00000376751 A0A0J9YXV3 536 aa15.58■□□□□ 0.08
RNF39-202ENST00000376751 NDUFA11Q86Y39 141 aa15.58■□□□□ 0.08
RNF39-202ENST00000376751 VCX2Q9H322 139 aa15.58■□□□□ 0.08
RNF39-202ENST00000376751 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.56■□□□□ 0.08
RNF39-202ENST00000376751 IGKV2-29A2NJV5 120 aaPredicted RBP15.56■□□□□ 0.08
RNF39-202ENST00000376751 INAFM1C9JVW0 142 aa15.56■□□□□ 0.08
RNF39-202ENST00000376751 ZNF22P17026 224 aaPredicted RBP15.56■□□□□ 0.08
RNF39-202ENST00000376751 AMELXQ99217 191 aa15.56■□□□□ 0.08
RNF39-202ENST00000376751 FN1P02751 2386 aaKnown RBP15.56■□□□□ 0.08
RNF39-202ENST00000376751 PLAC8L1A1L4L8 177 aa15.56■□□□□ 0.08
RNF39-202ENST00000376751 RNASE13Q5GAN3 156 aaKnown RBP15.56■□□□□ 0.08
RNF39-202ENST00000376751 TMEM223A0PJW6 202 aa15.55■□□□□ 0.08
RNF39-202ENST00000376751 LINC00482Q8N8I6 264 aa15.55■□□□□ 0.08
RNF39-202ENST00000376751 CSNK1G2-AS1Q8NCQ2 148 aa15.55■□□□□ 0.08
RNF39-202ENST00000376751 NOP10Q9NPE3 64 aaKnown RBP15.55■□□□□ 0.08
RNF39-202ENST00000376751 UBE2D4Q9Y2X8 147 aa15.55■□□□□ 0.08
RNF39-202ENST00000376751 A0A1W2PPM0 123 aa15.54■□□□□ 0.08
RNF39-202ENST00000376751 SCGB1D4Q6XE38 83 aa15.54■□□□□ 0.08
RNF39-202ENST00000376751 VWFP04275 2813 aa15.54■□□□□ 0.08
RNF39-202ENST00000376751 PF4P02776 101 aa15.53■□□□□ 0.08
RNF39-202ENST00000376751 COTL1Q14019 142 aa15.53■□□□□ 0.08
RNF39-202ENST00000376751 GAGE10A6NGK3 116 aa15.52■□□□□ 0.07
RNF39-202ENST00000376751 J3QQQ9 107 aa15.52■□□□□ 0.07
RNF39-202ENST00000376751 K7EP34 96 aa15.52■□□□□ 0.07
RNF39-202ENST00000376751 C12orf74Q32Q52 190 aa15.52■□□□□ 0.07
RNF39-202ENST00000376751 SPANXA1Q9NS26 97 aa15.52■□□□□ 0.07
RNF39-202ENST00000376751 HIVEP1P15822 2718 aa15.51■□□□□ 0.07
RNF39-202ENST00000376751 TRAV4A0A0B4J268 109 aa15.51■□□□□ 0.07
RNF39-202ENST00000376751 A0A0J9YY99 117 aa15.51■□□□□ 0.07
RNF39-202ENST00000376751 DAZ2Q13117 558 aaKnown RBP15.51■□□□□ 0.07
RNF39-202ENST00000376751 Q6ZUT4 128 aa15.51■□□□□ 0.07
RNF39-202ENST00000376751 SAMD5Q5TGI4 173 aa15.51■□□□□ 0.07
RNF39-202ENST00000376751 SPATA3Q8NHX4 192 aa15.51■□□□□ 0.07
RNF39-202ENST00000376751 C16orf74Q96GX8 76 aa15.51■□□□□ 0.07
RNF39-202ENST00000376751 IGHV3-64A0A075B6Q5 118 aa15.5■□□□□ 0.07
RNF39-202ENST00000376751 K7EQD1 137 aa15.5■□□□□ 0.07
RNF39-202ENST00000376751 LEPROTO15243 131 aa15.5■□□□□ 0.07
RNF39-202ENST00000376751 CRYBA4P53673 196 aa15.5■□□□□ 0.07
RNF39-202ENST00000376751 MRPS36P82909 103 aaKnown RBP15.49■□□□□ 0.07
RNF39-202ENST00000376751 OR5A1Q8NGJ0 315 aa15.49■□□□□ 0.07
RNF39-202ENST00000376751 A0A1B0GWB2 263 aa15.49■□□□□ 0.07
RNF39-202ENST00000376751 TENM1Q9UKZ4 2725 aa15.49■□□□□ 0.07
RNF39-202ENST00000376751 LGALS3P17931 250 aaKnown RBP15.48■□□□□ 0.07
RNF39-202ENST00000376751 C1QTNF4Q9BXJ3 329 aa15.48■□□□□ 0.07
RNF39-202ENST00000376751 GTF2H5Q6ZYL4 71 aa15.47■□□□□ 0.07
RNF39-202ENST00000376751 SLC25A29Q8N8R3 303 aa15.47■□□□□ 0.07
RNF39-202ENST00000376751 SPCS1Q9Y6A9 102 aa15.47■□□□□ 0.07
RNF39-202ENST00000376751 GAGE12BA1L429 117 aa15.47■□□□□ 0.07
RNF39-202ENST00000376751 IGLL5B9A064 214 aa15.47■□□□□ 0.07
RNF39-202ENST00000376751 GAGE7O76087 117 aa15.47■□□□□ 0.07
RNF39-202ENST00000376751 GAGE12FP0CL80 117 aa15.47■□□□□ 0.07
RNF39-202ENST00000376751 GAGE12GP0CL81 117 aa15.47■□□□□ 0.07
RNF39-202ENST00000376751 GAGE12IP0CL82 117 aa15.47■□□□□ 0.07
RNF39-202ENST00000376751 FABP2P12104 132 aa15.46■□□□□ 0.07
RNF39-202ENST00000376751 TRBV10-1A0A0K0K1A3 114 aa15.45■□□□□ 0.06
RNF39-202ENST00000376751 SRSF9Q13242 221 aaKnown RBP eCLIP15.45■□□□□ 0.06
RNF39-202ENST00000376751 RRN3P1Q2M238 152 aa15.45■□□□□ 0.06
RNF39-202ENST00000376751 RPL36AP83881 106 aaKnown RBP15.45■□□□□ 0.06
RNF39-202ENST00000376751 RPL36ALQ969Q0 106 aaKnown RBP15.45■□□□□ 0.06
RNF39-202ENST00000376751 UBE2D3P61077 147 aa15.44■□□□□ 0.06
RNF39-202ENST00000376751 UBE2D2P62837 147 aa15.44■□□□□ 0.06
RNF39-202ENST00000376751 NTM-AS1Q6ZSK4 140 aa15.44■□□□□ 0.06
RNF39-202ENST00000376751 OVOL2Q9BRP0 275 aa15.44■□□□□ 0.06
RNF39-202ENST00000376751 GAGE12JA6NER3 117 aa15.44■□□□□ 0.06
RNF39-202ENST00000376751 GAGE4Q13068 117 aa15.44■□□□□ 0.06
RNF39-202ENST00000376751 GAGE5Q13069 117 aa15.44■□□□□ 0.06
RNF39-202ENST00000376751 GAGE13Q4V321 117 aa15.44■□□□□ 0.06
RNF39-202ENST00000376751 SPANXB1Q9NS25 103 aaPredicted RBP15.44■□□□□ 0.06
RNF39-202ENST00000376751 LINC00694P0DN24 101 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms