RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 Q9UF83 564 aa14.65□□□□□ -0.06
VSX1-202ENST00000376709 JMJD1CQ15652 2540 aa14.65□□□□□ -0.06
VSX1-202ENST00000376709 ADARB2-AS1A8MUL3 147 aa14.64□□□□□ -0.07
VSX1-202ENST00000376709 INAFM1C9JVW0 142 aa14.64□□□□□ -0.07
VSX1-202ENST00000376709 NSD1Q96L73 2696 aaPredicted RBP14.64□□□□□ -0.07
VSX1-202ENST00000376709 IGHV3-53P01767 116 aa14.64□□□□□ -0.07
VSX1-202ENST00000376709 SCGB1D4Q6XE38 83 aa14.64□□□□□ -0.07
VSX1-202ENST00000376709 RS1O15537 224 aa14.63□□□□□ -0.07
VSX1-202ENST00000376709 IGLV1-51P01701 117 aa14.63□□□□□ -0.07
VSX1-202ENST00000376709 FOSL1P15407 271 aa14.63□□□□□ -0.07
VSX1-202ENST00000376709 VCX2Q9H322 139 aa14.63□□□□□ -0.07
VSX1-202ENST00000376709 IGLV4-3A0A075B6K6 122 aa14.62□□□□□ -0.07
VSX1-202ENST00000376709 TRGV1A0A0A0MS02 117 aa14.62□□□□□ -0.07
VSX1-202ENST00000376709 A0A1W2PPM0 123 aa14.62□□□□□ -0.07
VSX1-202ENST00000376709 K7EP34 96 aa14.61□□□□□ -0.07
VSX1-202ENST00000376709 GTF2H5Q6ZYL4 71 aa14.61□□□□□ -0.07
VSX1-202ENST00000376709 PHLDA1Q8WV24 401 aaPredicted RBP14.61□□□□□ -0.07
VSX1-202ENST00000376709 HIVEP1P15822 2718 aa14.61□□□□□ -0.07
VSX1-202ENST00000376709 TRBV7-3A0A075B6L6 115 aa14.61□□□□□ -0.07
VSX1-202ENST00000376709 GAGE12BA1L429 117 aa14.61□□□□□ -0.07
VSX1-202ENST00000376709 NFE4Q86UQ8 179 aa14.61□□□□□ -0.07
VSX1-202ENST00000376709 WFDC10AQ9H1F0 79 aa14.61□□□□□ -0.07
VSX1-202ENST00000376709 KRTAP10-3P60369 221 aa14.6□□□□□ -0.07
VSX1-202ENST00000376709 DNAJC30Q96LL9 226 aa14.6□□□□□ -0.07
VSX1-202ENST00000376709 NOTCH3Q9UM47 2321 aa14.6□□□□□ -0.07
VSX1-202ENST00000376709 IL17DQ8TAD2 202 aa14.6□□□□□ -0.07
VSX1-202ENST00000376709 TMEM263Q8WUH6 116 aaKnown RBP14.6□□□□□ -0.07
VSX1-202ENST00000376709 PYGO1Q9Y3Y4 419 aa14.6□□□□□ -0.07
VSX1-202ENST00000376709 SAMD5Q5TGI4 173 aa14.59□□□□□ -0.07
VSX1-202ENST00000376709 PLEKHB2Q96CS7 222 aa14.58□□□□□ -0.07
VSX1-202ENST00000376709 FAM110AQ9BQ89 295 aa14.58□□□□□ -0.07
VSX1-202ENST00000376709 SPCS1Q9Y6A9 102 aa14.58□□□□□ -0.07
VSX1-202ENST00000376709 IGHV3-38A0A0C4DH36 116 aa14.58□□□□□ -0.08
VSX1-202ENST00000376709 RPL35AP18077 110 aaKnown RBP14.57□□□□□ -0.08
VSX1-202ENST00000376709 CEMP1Q6PRD7 247 aaPredicted RBP14.57□□□□□ -0.08
VSX1-202ENST00000376709 FABP2P12104 132 aa14.57□□□□□ -0.08
VSX1-202ENST00000376709 COTL1Q14019 142 aa14.57□□□□□ -0.08
VSX1-202ENST00000376709 A0A0J9YXV3 536 aa14.56□□□□□ -0.08
VSX1-202ENST00000376709 Q6ZTI0 123 aa14.56□□□□□ -0.08
VSX1-202ENST00000376709 CHCHD7Q9BUK0 85 aa14.56□□□□□ -0.08
VSX1-202ENST00000376709 GIG44P09565 113 aaPredicted RBP14.56□□□□□ -0.08
VSX1-202ENST00000376709 TSPEAR-AS2P59090 65 aa14.56□□□□□ -0.08
VSX1-202ENST00000376709 SRSF9Q13242 221 aaKnown RBP eCLIP14.56□□□□□ -0.08
VSX1-202ENST00000376709 C19orf73Q9NVV2 129 aa14.56□□□□□ -0.08
VSX1-202ENST00000376709 J3QQQ9 107 aa14.55□□□□□ -0.08
VSX1-202ENST00000376709 PF4P02776 101 aa14.55□□□□□ -0.08
VSX1-202ENST00000376709 LGALS3P17931 250 aaKnown RBP14.55□□□□□ -0.08
VSX1-202ENST00000376709 C12orf74Q32Q52 190 aa14.55□□□□□ -0.08
VSX1-202ENST00000376709 NDUFA11Q86Y39 141 aa14.55□□□□□ -0.08
VSX1-202ENST00000376709 ZNF479Q96JC4 524 aa14.55□□□□□ -0.08
VSX1-202ENST00000376709 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.54□□□□□ -0.08
VSX1-202ENST00000376709 IGKV2-29A2NJV5 120 aaPredicted RBP14.54□□□□□ -0.08
VSX1-202ENST00000376709 ZNF22P17026 224 aaPredicted RBP14.54□□□□□ -0.08
VSX1-202ENST00000376709 AMELXQ99217 191 aa14.54□□□□□ -0.08
VSX1-202ENST00000376709 FN1P02751 2386 aaKnown RBP14.54□□□□□ -0.08
VSX1-202ENST00000376709 TMEM223A0PJW6 202 aa14.54□□□□□ -0.08
VSX1-202ENST00000376709 RBX1P62877 108 aa14.54□□□□□ -0.08
VSX1-202ENST00000376709 C1QTNF4Q9BXJ3 329 aa14.54□□□□□ -0.08
VSX1-202ENST00000376709 NOP10Q9NPE3 64 aaKnown RBP14.54□□□□□ -0.08
VSX1-202ENST00000376709 SPANXA1Q9NS26 97 aa14.54□□□□□ -0.08
VSX1-202ENST00000376709 CRYBA4P53673 196 aa14.53□□□□□ -0.08
VSX1-202ENST00000376709 RNASE13Q5GAN3 156 aaKnown RBP14.53□□□□□ -0.08
VSX1-202ENST00000376709 FAM104AQ969W3 186 aa14.53□□□□□ -0.08
VSX1-202ENST00000376709 UBE2D4Q9Y2X8 147 aa14.53□□□□□ -0.08
VSX1-202ENST00000376709 C2CD3Q4AC94 2353 aa14.52□□□□□ -0.08
VSX1-202ENST00000376709 OCIAD2Q56VL3 154 aa14.52□□□□□ -0.08
VSX1-202ENST00000376709 C16orf74Q96GX8 76 aa14.52□□□□□ -0.08
VSX1-202ENST00000376709 IGHV3-64A0A075B6Q5 118 aa14.51□□□□□ -0.09
VSX1-202ENST00000376709 A0A0J9YY99 117 aa14.51□□□□□ -0.09
VSX1-202ENST00000376709 OR5A1Q8NGJ0 315 aa14.51□□□□□ -0.09
VSX1-202ENST00000376709 TRAV4A0A0B4J268 109 aa14.51□□□□□ -0.09
VSX1-202ENST00000376709 IGLL5B9A064 214 aa14.51□□□□□ -0.09
VSX1-202ENST00000376709 LEPROTO15243 131 aa14.51□□□□□ -0.09
VSX1-202ENST00000376709 TMEM238LA0A1B0GVL6 79 aa14.5□□□□□ -0.09
VSX1-202ENST00000376709 A6NJY4 79 aa14.5□□□□□ -0.09
VSX1-202ENST00000376709 K7EQD1 137 aa14.5□□□□□ -0.09
VSX1-202ENST00000376709 DAZ2Q13117 558 aaKnown RBP14.5□□□□□ -0.09
VSX1-202ENST00000376709 VWFP04275 2813 aa14.5□□□□□ -0.09
VSX1-202ENST00000376709 MRPS36P82909 103 aaKnown RBP14.5□□□□□ -0.09
VSX1-202ENST00000376709 RPL36AP83881 106 aaKnown RBP14.49□□□□□ -0.09
VSX1-202ENST00000376709 RPL36ALQ969Q0 106 aaKnown RBP14.49□□□□□ -0.09
VSX1-202ENST00000376709 TENM1Q9UKZ4 2725 aa14.49□□□□□ -0.09
VSX1-202ENST00000376709 A0A1B0GWB2 263 aa14.49□□□□□ -0.09
VSX1-202ENST00000376709 RNF151Q2KHN1 245 aa14.49□□□□□ -0.09
VSX1-202ENST00000376709 TRBV10-1A0A0K0K1A3 114 aa14.48□□□□□ -0.09
VSX1-202ENST00000376709 RRN3P1Q2M238 152 aa14.48□□□□□ -0.09
VSX1-202ENST00000376709 Q6ZUT4 128 aa14.48□□□□□ -0.09
VSX1-202ENST00000376709 CSNK1G2-AS1Q8NCQ2 148 aa14.48□□□□□ -0.09
VSX1-202ENST00000376709 TRGV2A0A075B6R0 118 aa14.47□□□□□ -0.09
VSX1-202ENST00000376709 LINC00482Q8N8I6 264 aa14.47□□□□□ -0.09
VSX1-202ENST00000376709 SLC25A29Q8N8R3 303 aa14.47□□□□□ -0.09
VSX1-202ENST00000376709 CBY1Q9Y3M2 126 aa14.47□□□□□ -0.09
VSX1-202ENST00000376709 PLAC8L1A1L4L8 177 aa14.47□□□□□ -0.09
VSX1-202ENST00000376709 GAGE7O76087 117 aa14.46□□□□□ -0.09
VSX1-202ENST00000376709 GAGE12FP0CL80 117 aa14.46□□□□□ -0.09
VSX1-202ENST00000376709 GAGE12GP0CL81 117 aa14.46□□□□□ -0.09
VSX1-202ENST00000376709 GAGE12IP0CL82 117 aa14.46□□□□□ -0.09
VSX1-202ENST00000376709 DGAT2L7PQ6IED9 249 aa14.46□□□□□ -0.09
VSX1-202ENST00000376709 TIMM21Q9BVV7 248 aa14.46□□□□□ -0.09
VSX1-202ENST00000376709 SPANXB1Q9NS25 103 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms