RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 Q9UF83 564 aa14.65□□□□□ -0.06
VSX1-202ENST00000376709 JMJD1CQ15652 2540 aa14.65□□□□□ -0.06
VSX1-202ENST00000376709 ADARB2-AS1A8MUL3 147 aa14.64□□□□□ -0.07
VSX1-202ENST00000376709 INAFM1C9JVW0 142 aa14.64□□□□□ -0.07
VSX1-202ENST00000376709 NSD1Q96L73 2696 aaPredicted RBP14.64□□□□□ -0.07
VSX1-202ENST00000376709 IGHV3-53P01767 116 aa14.64□□□□□ -0.07
VSX1-202ENST00000376709 SCGB1D4Q6XE38 83 aa14.64□□□□□ -0.07
VSX1-202ENST00000376709 RS1O15537 224 aa14.63□□□□□ -0.07
VSX1-202ENST00000376709 IGLV1-51P01701 117 aa14.63□□□□□ -0.07
VSX1-202ENST00000376709 FOSL1P15407 271 aa14.63□□□□□ -0.07
VSX1-202ENST00000376709 VCX2Q9H322 139 aa14.63□□□□□ -0.07
VSX1-202ENST00000376709 IGLV4-3A0A075B6K6 122 aa14.62□□□□□ -0.07
VSX1-202ENST00000376709 TRGV1A0A0A0MS02 117 aa14.62□□□□□ -0.07
VSX1-202ENST00000376709 A0A1W2PPM0 123 aa14.62□□□□□ -0.07
VSX1-202ENST00000376709 K7EP34 96 aa14.61□□□□□ -0.07
VSX1-202ENST00000376709 GTF2H5Q6ZYL4 71 aa14.61□□□□□ -0.07
VSX1-202ENST00000376709 PHLDA1Q8WV24 401 aaPredicted RBP14.61□□□□□ -0.07
VSX1-202ENST00000376709 HIVEP1P15822 2718 aa14.61□□□□□ -0.07
VSX1-202ENST00000376709 TRBV7-3A0A075B6L6 115 aa14.61□□□□□ -0.07
VSX1-202ENST00000376709 GAGE12BA1L429 117 aa14.61□□□□□ -0.07
VSX1-202ENST00000376709 NFE4Q86UQ8 179 aa14.61□□□□□ -0.07
VSX1-202ENST00000376709 WFDC10AQ9H1F0 79 aa14.61□□□□□ -0.07
VSX1-202ENST00000376709 KRTAP10-3P60369 221 aa14.6□□□□□ -0.07
VSX1-202ENST00000376709 DNAJC30Q96LL9 226 aa14.6□□□□□ -0.07
VSX1-202ENST00000376709 NOTCH3Q9UM47 2321 aa14.6□□□□□ -0.07
VSX1-202ENST00000376709 IL17DQ8TAD2 202 aa14.6□□□□□ -0.07
VSX1-202ENST00000376709 TMEM263Q8WUH6 116 aaKnown RBP14.6□□□□□ -0.07
VSX1-202ENST00000376709 PYGO1Q9Y3Y4 419 aa14.6□□□□□ -0.07
VSX1-202ENST00000376709 SAMD5Q5TGI4 173 aa14.59□□□□□ -0.07
VSX1-202ENST00000376709 PLEKHB2Q96CS7 222 aa14.58□□□□□ -0.07
VSX1-202ENST00000376709 FAM110AQ9BQ89 295 aa14.58□□□□□ -0.07
VSX1-202ENST00000376709 SPCS1Q9Y6A9 102 aa14.58□□□□□ -0.07
VSX1-202ENST00000376709 IGHV3-38A0A0C4DH36 116 aa14.58□□□□□ -0.08
VSX1-202ENST00000376709 RPL35AP18077 110 aaKnown RBP14.57□□□□□ -0.08
VSX1-202ENST00000376709 CEMP1Q6PRD7 247 aaPredicted RBP14.57□□□□□ -0.08
VSX1-202ENST00000376709 FABP2P12104 132 aa14.57□□□□□ -0.08
VSX1-202ENST00000376709 COTL1Q14019 142 aa14.57□□□□□ -0.08
VSX1-202ENST00000376709 A0A0J9YXV3 536 aa14.56□□□□□ -0.08
VSX1-202ENST00000376709 Q6ZTI0 123 aa14.56□□□□□ -0.08
VSX1-202ENST00000376709 CHCHD7Q9BUK0 85 aa14.56□□□□□ -0.08
VSX1-202ENST00000376709 GIG44P09565 113 aaPredicted RBP14.56□□□□□ -0.08
VSX1-202ENST00000376709 TSPEAR-AS2P59090 65 aa14.56□□□□□ -0.08
VSX1-202ENST00000376709 SRSF9Q13242 221 aaKnown RBP eCLIP14.56□□□□□ -0.08
VSX1-202ENST00000376709 C19orf73Q9NVV2 129 aa14.56□□□□□ -0.08
VSX1-202ENST00000376709 J3QQQ9 107 aa14.55□□□□□ -0.08
VSX1-202ENST00000376709 PF4P02776 101 aa14.55□□□□□ -0.08
VSX1-202ENST00000376709 LGALS3P17931 250 aaKnown RBP14.55□□□□□ -0.08
VSX1-202ENST00000376709 C12orf74Q32Q52 190 aa14.55□□□□□ -0.08
VSX1-202ENST00000376709 NDUFA11Q86Y39 141 aa14.55□□□□□ -0.08
VSX1-202ENST00000376709 ZNF479Q96JC4 524 aa14.55□□□□□ -0.08
VSX1-202ENST00000376709 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.54□□□□□ -0.08
VSX1-202ENST00000376709 IGKV2-29A2NJV5 120 aaPredicted RBP14.54□□□□□ -0.08
VSX1-202ENST00000376709 ZNF22P17026 224 aaPredicted RBP14.54□□□□□ -0.08
VSX1-202ENST00000376709 AMELXQ99217 191 aa14.54□□□□□ -0.08
VSX1-202ENST00000376709 FN1P02751 2386 aaKnown RBP14.54□□□□□ -0.08
VSX1-202ENST00000376709 TMEM223A0PJW6 202 aa14.54□□□□□ -0.08
VSX1-202ENST00000376709 RBX1P62877 108 aa14.54□□□□□ -0.08
VSX1-202ENST00000376709 C1QTNF4Q9BXJ3 329 aa14.54□□□□□ -0.08
VSX1-202ENST00000376709 NOP10Q9NPE3 64 aaKnown RBP14.54□□□□□ -0.08
VSX1-202ENST00000376709 SPANXA1Q9NS26 97 aa14.54□□□□□ -0.08
VSX1-202ENST00000376709 CRYBA4P53673 196 aa14.53□□□□□ -0.08
VSX1-202ENST00000376709 RNASE13Q5GAN3 156 aaKnown RBP14.53□□□□□ -0.08
VSX1-202ENST00000376709 FAM104AQ969W3 186 aa14.53□□□□□ -0.08
VSX1-202ENST00000376709 UBE2D4Q9Y2X8 147 aa14.53□□□□□ -0.08
VSX1-202ENST00000376709 C2CD3Q4AC94 2353 aa14.52□□□□□ -0.08
VSX1-202ENST00000376709 OCIAD2Q56VL3 154 aa14.52□□□□□ -0.08
VSX1-202ENST00000376709 C16orf74Q96GX8 76 aa14.52□□□□□ -0.08
VSX1-202ENST00000376709 IGHV3-64A0A075B6Q5 118 aa14.51□□□□□ -0.09
VSX1-202ENST00000376709 A0A0J9YY99 117 aa14.51□□□□□ -0.09
VSX1-202ENST00000376709 OR5A1Q8NGJ0 315 aa14.51□□□□□ -0.09
VSX1-202ENST00000376709 TRAV4A0A0B4J268 109 aa14.51□□□□□ -0.09
VSX1-202ENST00000376709 IGLL5B9A064 214 aa14.51□□□□□ -0.09
VSX1-202ENST00000376709 LEPROTO15243 131 aa14.51□□□□□ -0.09
VSX1-202ENST00000376709 TMEM238LA0A1B0GVL6 79 aa14.5□□□□□ -0.09
VSX1-202ENST00000376709 A6NJY4 79 aa14.5□□□□□ -0.09
VSX1-202ENST00000376709 K7EQD1 137 aa14.5□□□□□ -0.09
VSX1-202ENST00000376709 DAZ2Q13117 558 aaKnown RBP14.5□□□□□ -0.09
VSX1-202ENST00000376709 VWFP04275 2813 aa14.5□□□□□ -0.09
VSX1-202ENST00000376709 MRPS36P82909 103 aaKnown RBP14.5□□□□□ -0.09
VSX1-202ENST00000376709 RPL36AP83881 106 aaKnown RBP14.49□□□□□ -0.09
VSX1-202ENST00000376709 RPL36ALQ969Q0 106 aaKnown RBP14.49□□□□□ -0.09
VSX1-202ENST00000376709 TENM1Q9UKZ4 2725 aa14.49□□□□□ -0.09
VSX1-202ENST00000376709 A0A1B0GWB2 263 aa14.49□□□□□ -0.09
VSX1-202ENST00000376709 RNF151Q2KHN1 245 aa14.49□□□□□ -0.09
VSX1-202ENST00000376709 TRBV10-1A0A0K0K1A3 114 aa14.48□□□□□ -0.09
VSX1-202ENST00000376709 RRN3P1Q2M238 152 aa14.48□□□□□ -0.09
VSX1-202ENST00000376709 Q6ZUT4 128 aa14.48□□□□□ -0.09
VSX1-202ENST00000376709 CSNK1G2-AS1Q8NCQ2 148 aa14.48□□□□□ -0.09
VSX1-202ENST00000376709 TRGV2A0A075B6R0 118 aa14.47□□□□□ -0.09
VSX1-202ENST00000376709 LINC00482Q8N8I6 264 aa14.47□□□□□ -0.09
VSX1-202ENST00000376709 SLC25A29Q8N8R3 303 aa14.47□□□□□ -0.09
VSX1-202ENST00000376709 CBY1Q9Y3M2 126 aa14.47□□□□□ -0.09
VSX1-202ENST00000376709 PLAC8L1A1L4L8 177 aa14.47□□□□□ -0.09
VSX1-202ENST00000376709 GAGE7O76087 117 aa14.46□□□□□ -0.09
VSX1-202ENST00000376709 GAGE12FP0CL80 117 aa14.46□□□□□ -0.09
VSX1-202ENST00000376709 GAGE12GP0CL81 117 aa14.46□□□□□ -0.09
VSX1-202ENST00000376709 GAGE12IP0CL82 117 aa14.46□□□□□ -0.09
VSX1-202ENST00000376709 DGAT2L7PQ6IED9 249 aa14.46□□□□□ -0.09
VSX1-202ENST00000376709 TIMM21Q9BVV7 248 aa14.46□□□□□ -0.09
VSX1-202ENST00000376709 SPANXB1Q9NS25 103 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms