RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 TP53TG1Q9Y2A0 90 aa14.97□□□□□ -0.01
HLA-C-201ENST00000376228 SCGB3A1Q96QR1 104 aa14.97□□□□□ -0.01
HLA-C-201ENST00000376228 Q9UF83 564 aa14.97□□□□□ -0.01
HLA-C-201ENST00000376228 TRBV7-3A0A075B6L6 115 aa14.96□□□□□ -0.02
HLA-C-201ENST00000376228 PCP4L1A6NKN8 68 aa14.96□□□□□ -0.02
HLA-C-201ENST00000376228 TRAV12-1A0A0B4J245 112 aa14.95□□□□□ -0.02
HLA-C-201ENST00000376228 PRSS1P07477 247 aa14.95□□□□□ -0.02
HLA-C-201ENST00000376228 SLC25A29Q8N8R3 303 aa14.95□□□□□ -0.02
HLA-C-201ENST00000376228 Q8NAQ8 132 aa14.95□□□□□ -0.02
HLA-C-201ENST00000376228 C20orf203Q8NBC4 194 aa14.95□□□□□ -0.02
HLA-C-201ENST00000376228 STARD9Q9P2P6 4700 aa14.95□□□□□ -0.02
HLA-C-201ENST00000376228 IGHV4-28A0A0C4DH34 117 aa14.94□□□□□ -0.02
HLA-C-201ENST00000376228 IGIPA6NJ69 53 aa14.94□□□□□ -0.02
HLA-C-201ENST00000376228 H0Y8G0 127 aa14.94□□□□□ -0.02
HLA-C-201ENST00000376228 EMP1P54849 157 aa14.94□□□□□ -0.02
HLA-C-201ENST00000376228 RPL36AP83881 106 aaKnown RBP14.94□□□□□ -0.02
HLA-C-201ENST00000376228 FHL2Q14192 279 aa14.94□□□□□ -0.02
HLA-C-201ENST00000376228 RPL36ALQ969Q0 106 aaKnown RBP14.94□□□□□ -0.02
HLA-C-201ENST00000376228 TMEM141Q96I45 108 aa14.94□□□□□ -0.02
HLA-C-201ENST00000376228 TIMM17AQ99595 171 aa14.94□□□□□ -0.02
HLA-C-201ENST00000376228 CSMD3Q7Z407 3707 aa14.94□□□□□ -0.02
HLA-C-201ENST00000376228 C3orf84H3BNL1 204 aa14.93□□□□□ -0.02
HLA-C-201ENST00000376228 ODF1Q14990 250 aa14.93□□□□□ -0.02
HLA-C-201ENST00000376228 PAM16Q9Y3D7 125 aa14.93□□□□□ -0.02
HLA-C-201ENST00000376228 ZFAND6Q6FIF0 208 aa14.92□□□□□ -0.02
HLA-C-201ENST00000376228 Q6ZN92 141 aa14.92□□□□□ -0.02
HLA-C-201ENST00000376228 ATOH7Q8N100 152 aa14.92□□□□□ -0.02
HLA-C-201ENST00000376228 PRO1933Q9H354 126 aa14.92□□□□□ -0.02
HLA-C-201ENST00000376228 DKK2Q9UBU2 259 aa14.92□□□□□ -0.02
HLA-C-201ENST00000376228 TRGV4A0A0C4DH28 118 aa14.92□□□□□ -0.02
HLA-C-201ENST00000376228 SPATA45Q537H7 98 aa14.92□□□□□ -0.02
HLA-C-201ENST00000376228 CASC10Q5T4H9 136 aa14.92□□□□□ -0.02
HLA-C-201ENST00000376228 FAM222AQ5U5X8 452 aa14.92□□□□□ -0.02
HLA-C-201ENST00000376228 ZNRF2Q8NHG8 242 aa14.92□□□□□ -0.02
HLA-C-201ENST00000376228 A0A087WX48 190 aa14.91□□□□□ -0.02
HLA-C-201ENST00000376228 UBE2D3P61077 147 aa14.91□□□□□ -0.02
HLA-C-201ENST00000376228 UBE2D2P62837 147 aa14.91□□□□□ -0.02
HLA-C-201ENST00000376228 DAZ4Q86SG3 579 aaKnown RBP14.91□□□□□ -0.02
HLA-C-201ENST00000376228 DAZ3Q9NR90 486 aaKnown RBP14.91□□□□□ -0.02
HLA-C-201ENST00000376228 NPSP0C0P6 89 aa14.9□□□□□ -0.02
HLA-C-201ENST00000376228 DEFB130BP0DP73 79 aa14.9□□□□□ -0.02
HLA-C-201ENST00000376228 DEFB130AP0DP74 79 aa14.9□□□□□ -0.02
HLA-C-201ENST00000376228 COTL1Q14019 142 aa14.9□□□□□ -0.02
HLA-C-201ENST00000376228 RPL39P62891 51 aaKnown RBP14.89□□□□□ -0.03
HLA-C-201ENST00000376228 BAALCQ8WXS3 180 aa14.89□□□□□ -0.03
HLA-C-201ENST00000376228 PMCHL2Q9BQD1 86 aa14.89□□□□□ -0.03
HLA-C-201ENST00000376228 PYGO1Q9Y3Y4 419 aa14.89□□□□□ -0.03
HLA-C-201ENST00000376228 HSBP1L1C9JCN9 74 aa14.88□□□□□ -0.03
HLA-C-201ENST00000376228 PRADC1Q9BSG0 188 aa14.88□□□□□ -0.03
HLA-C-201ENST00000376228 TEX48A0A1B0GUV7 120 aa14.87□□□□□ -0.03
HLA-C-201ENST00000376228 MAJINQ3KP22 176 aa14.87□□□□□ -0.03
HLA-C-201ENST00000376228 CHCHD7Q9BUK0 85 aa14.87□□□□□ -0.03
HLA-C-201ENST00000376228 LINC00694P0DN24 101 aa14.87□□□□□ -0.03
HLA-C-201ENST00000376228 DDTP30046 118 aa14.87□□□□□ -0.03
HLA-C-201ENST00000376228 DEFB104AQ8WTQ1 72 aa14.87□□□□□ -0.03
HLA-C-201ENST00000376228 A0A0J9YWU9 116 aa14.86□□□□□ -0.03
HLA-C-201ENST00000376228 F8VRH5 84 aa14.86□□□□□ -0.03
HLA-C-201ENST00000376228 DPM2O94777 84 aa14.86□□□□□ -0.03
HLA-C-201ENST00000376228 SPART-AS1P0CW21 52 aa14.86□□□□□ -0.03
HLA-C-201ENST00000376228 CRYBA4P53673 196 aa14.86□□□□□ -0.03
HLA-C-201ENST00000376228 GTSF1LQ9H1H1 148 aa14.86□□□□□ -0.03
HLA-C-201ENST00000376228 HHLA3Q9XRX5 114 aa14.86□□□□□ -0.03
HLA-C-201ENST00000376228 RYR3Q15413 4870 aa14.86□□□□□ -0.03
HLA-C-201ENST00000376228 IGKCP01834 107 aa14.85□□□□□ -0.03
HLA-C-201ENST00000376228 IGLC3P0DOY3 106 aa14.85□□□□□ -0.03
HLA-C-201ENST00000376228 PHLDA1Q8WV24 401 aaPredicted RBP14.85□□□□□ -0.03
HLA-C-201ENST00000376228 MIEN1Q9BRT3 115 aa14.85□□□□□ -0.03
HLA-C-201ENST00000376228 hDV102S1A0JD36 115 aa14.84□□□□□ -0.03
HLA-C-201ENST00000376228 GAGE12JA6NER3 117 aa14.84□□□□□ -0.03
HLA-C-201ENST00000376228 GAGE1Q13065 139 aa14.84□□□□□ -0.03
HLA-C-201ENST00000376228 GAGE4Q13068 117 aa14.84□□□□□ -0.03
HLA-C-201ENST00000376228 GAGE5Q13069 117 aa14.84□□□□□ -0.03
HLA-C-201ENST00000376228 PMVKQ15126 192 aa14.84□□□□□ -0.03
HLA-C-201ENST00000376228 GAGE13Q4V321 117 aa14.84□□□□□ -0.03
HLA-C-201ENST00000376228 MRPL35Q9NZE8 188 aaKnown RBP14.84□□□□□ -0.03
HLA-C-201ENST00000376228 PRO0255Q9UI72 69 aa14.84□□□□□ -0.03
HLA-C-201ENST00000376228 IGHV3-38A0A0C4DH36 116 aa14.83□□□□□ -0.04
HLA-C-201ENST00000376228 PRSS29PA6NIE9 313 aa14.83□□□□□ -0.04
HLA-C-201ENST00000376228 PLNP26678 52 aa14.83□□□□□ -0.04
HLA-C-201ENST00000376228 DAD1P61803 113 aa14.83□□□□□ -0.04
HLA-C-201ENST00000376228 PAPPA-AS1Q5QFB9 102 aa14.83□□□□□ -0.04
HLA-C-201ENST00000376228 TIMM21Q9BVV7 248 aa14.83□□□□□ -0.04
HLA-C-201ENST00000376228 SPANXA1Q9NS26 97 aa14.83□□□□□ -0.04
HLA-C-201ENST00000376228 CHTOPQ9Y3Y2 248 aaKnown RBP14.82□□□□□ -0.04
HLA-C-201ENST00000376228 LINC00587B1AMM8 73 aa14.82□□□□□ -0.04
HLA-C-201ENST00000376228 DEFB4AO15263 64 aa14.82□□□□□ -0.04
HLA-C-201ENST00000376228 UQCR10Q9UDW1 63 aa14.82□□□□□ -0.04
HLA-C-201ENST00000376228 TMEM97Q5BJF2 176 aa14.81□□□□□ -0.04
HLA-C-201ENST00000376228 C11orf68Q9H3H3 251 aaKnown RBP14.81□□□□□ -0.04
HLA-C-201ENST00000376228 CST9LQ9H4G1 147 aa14.81□□□□□ -0.04
HLA-C-201ENST00000376228 CELA1Q9UNI1 258 aa14.81□□□□□ -0.04
HLA-C-201ENST00000376228 IGLV4-3A0A075B6K6 122 aa14.8□□□□□ -0.04
HLA-C-201ENST00000376228 LOC100131303A0A0U1RQF7 123 aa14.8□□□□□ -0.04
HLA-C-201ENST00000376228 ATP5G1P05496 136 aa14.8□□□□□ -0.04
HLA-C-201ENST00000376228 NTM-AS1Q6ZSK4 140 aa14.8□□□□□ -0.04
HLA-C-201ENST00000376228 UBE2D4Q9Y2X8 147 aa14.8□□□□□ -0.04
HLA-C-201ENST00000376228 SMAGPQ0VAQ4 97 aa14.78□□□□□ -0.04
HLA-C-201ENST00000376228 FAM104AQ969W3 186 aa14.78□□□□□ -0.04
HLA-C-201ENST00000376228 AMELXQ99217 191 aa14.78□□□□□ -0.04
HLA-C-201ENST00000376228 TENM2Q9NT68 2774 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms