RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 NEXN-AS1Q8NBZ9 246 aa12.84□□□□□ -0.35
MCF2L-203ENST00000375604 SHANK1Q9Y566 2161 aa12.84□□□□□ -0.35
MCF2L-203ENST00000375604 KIAA1549Q9HCM3 1950 aa12.84□□□□□ -0.35
MCF2L-203ENST00000375604 FREM1Q5H8C1 2179 aa12.84□□□□□ -0.35
MCF2L-203ENST00000375604 IGLV2-8P01709 118 aa12.84□□□□□ -0.35
MCF2L-203ENST00000375604 C11orf71Q6IPW1 123 aa12.84□□□□□ -0.35
MCF2L-203ENST00000375604 A8MZ25 164 aa12.83□□□□□ -0.36
MCF2L-203ENST00000375604 B5MCH6 92 aa12.83□□□□□ -0.36
MCF2L-203ENST00000375604 HRCT1Q6UXD1 115 aa12.83□□□□□ -0.36
MCF2L-203ENST00000375604 FAM19A1Q7Z5A9 133 aa12.83□□□□□ -0.36
MCF2L-203ENST00000375604 NOTCH3Q9UM47 2321 aa12.83□□□□□ -0.36
MCF2L-203ENST00000375604 TRBV10-1A0A0K0K1A3 114 aa12.83□□□□□ -0.36
MCF2L-203ENST00000375604 H0YGX0 51 aa12.83□□□□□ -0.36
MCF2L-203ENST00000375604 MED14OSP0DP75 135 aa12.83□□□□□ -0.36
MCF2L-203ENST00000375604 B9D2Q9BPU9 175 aa12.83□□□□□ -0.36
MCF2L-203ENST00000375604 BBC3Q96PG8 261 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-203ENST00000375604 PLCE1Q9P212 2302 aa12.83□□□□□ -0.36
MCF2L-203ENST00000375604 A0A0B4J2C4 111 aa12.83□□□□□ -0.36
MCF2L-203ENST00000375604 SCXQ7RTU7 201 aa12.83□□□□□ -0.36
MCF2L-203ENST00000375604 PRO3102Q9H379 93 aa12.83□□□□□ -0.36
MCF2L-203ENST00000375604 A0A1B0GX51 115 aa12.82□□□□□ -0.36
MCF2L-203ENST00000375604 SPTAN1Q13813 2472 aaKnown RBP12.82□□□□□ -0.36
MCF2L-203ENST00000375604 ZNF295-AS1Q8N0V1 137 aa12.82□□□□□ -0.36
MCF2L-203ENST00000375604 COX7BP24311 80 aa12.82□□□□□ -0.36
MCF2L-203ENST00000375604 XAGE1AQ9HD64 81 aa12.82□□□□□ -0.36
MCF2L-203ENST00000375604 PKIGQ9Y2B9 76 aa12.82□□□□□ -0.36
MCF2L-203ENST00000375604 FOXI1Q12951 378 aa12.82□□□□□ -0.36
MCF2L-203ENST00000375604 Q8N976 141 aa12.82□□□□□ -0.36
MCF2L-203ENST00000375604 ZNF702PQ9H963 129 aa12.82□□□□□ -0.36
MCF2L-203ENST00000375604 PSMB8P28062 276 aa12.81□□□□□ -0.36
MCF2L-203ENST00000375604 CFAP126Q5VTH2 177 aa12.81□□□□□ -0.36
MCF2L-203ENST00000375604 FAM236AA0A1B0GUQ0 79 aa12.81□□□□□ -0.36
MCF2L-203ENST00000375604 FAM236BA0A1B0GV22 79 aa12.81□□□□□ -0.36
MCF2L-203ENST00000375604 K7EQG2 157 aa12.81□□□□□ -0.36
MCF2L-203ENST00000375604 P0C879 139 aa12.81□□□□□ -0.36
MCF2L-203ENST00000375604 CRIP1P50238 77 aa12.8□□□□□ -0.36
MCF2L-203ENST00000375604 PIK3CD-AS1Q5SR53 167 aa12.8□□□□□ -0.36
MCF2L-203ENST00000375604 LY6LH3BQJ8 138 aa12.8□□□□□ -0.36
MCF2L-203ENST00000375604 CRYGBP07316 175 aa12.8□□□□□ -0.36
MCF2L-203ENST00000375604 TAX1BP3O14907 124 aa12.79□□□□□ -0.36
MCF2L-203ENST00000375604 A0A0J9YXY3 114 aa12.78□□□□□ -0.36
MCF2L-203ENST00000375604 LY6G6CO95867 125 aa12.78□□□□□ -0.36
MCF2L-203ENST00000375604 KRTAP10-9P60411 292 aa12.78□□□□□ -0.36
MCF2L-203ENST00000375604 CXCL5P42830 114 aa12.78□□□□□ -0.36
MCF2L-203ENST00000375604 PPDPFQ9H3Y8 114 aa12.78□□□□□ -0.36
MCF2L-203ENST00000375604 ZFAND3Q9H8U3 227 aa12.77□□□□□ -0.36
MCF2L-203ENST00000375604 DSCAML1Q8TD84 2053 aa12.77□□□□□ -0.36
MCF2L-203ENST00000375604 CDKN2A-AS1Q9UH64 79 aa12.77□□□□□ -0.36
MCF2L-203ENST00000375604 IGKV2-28A0A075B6P5 120 aa12.77□□□□□ -0.37
MCF2L-203ENST00000375604 IGKV2D-28P01615 120 aa12.77□□□□□ -0.37
MCF2L-203ENST00000375604 TCL1BO95988 128 aa12.77□□□□□ -0.37
MCF2L-203ENST00000375604 OXLD1Q5BKU9 147 aa12.77□□□□□ -0.37
MCF2L-203ENST00000375604 CLUHP3Q96NS8 147 aa12.77□□□□□ -0.37
MCF2L-203ENST00000375604 EIF4EBP1Q13541 118 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-203ENST00000375604 ACYP1P07311 99 aa12.76□□□□□ -0.37
MCF2L-203ENST00000375604 MIAQ16674 131 aa12.76□□□□□ -0.37
MCF2L-203ENST00000375604 EP400Q96L91 3159 aa12.76□□□□□ -0.37
MCF2L-203ENST00000375604 IGKV4-1P06312 121 aa12.76□□□□□ -0.37
MCF2L-203ENST00000375604 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-203ENST00000375604 PLA2G2AP14555 144 aa12.75□□□□□ -0.37
MCF2L-203ENST00000375604 LINC01006Q8NI28 216 aa12.75□□□□□ -0.37
MCF2L-203ENST00000375604 NANOS2P60321 138 aaKnown RBP12.75□□□□□ -0.37
MCF2L-203ENST00000375604 CACNA1HO95180 2353 aa12.75□□□□□ -0.37
MCF2L-203ENST00000375604 A0A0J9YWU9 116 aa12.74□□□□□ -0.37
MCF2L-203ENST00000375604 PRR9Q5T870 116 aa12.74□□□□□ -0.37
MCF2L-203ENST00000375604 LYRM9A8MSI8 78 aa12.74□□□□□ -0.37
MCF2L-203ENST00000375604 RETNQ9HD89 108 aa12.74□□□□□ -0.37
MCF2L-203ENST00000375604 TRBV10-2A0A0K0K1G8 114 aa12.73□□□□□ -0.37
MCF2L-203ENST00000375604 MP68P56378 58 aa12.73□□□□□ -0.37
MCF2L-203ENST00000375604 LINC00574Q9H8X3 128 aa12.73□□□□□ -0.37
MCF2L-203ENST00000375604 MUC6Q6W4X9 2439 aa12.73□□□□□ -0.37
MCF2L-203ENST00000375604 TRAV23DV6A0A075B6W5 121 aa12.73□□□□□ -0.37
MCF2L-203ENST00000375604 A0A1B0GXF2 115 aa12.72□□□□□ -0.37
MCF2L-203ENST00000375604 RPL37AP8A6NKH3 93 aa12.72□□□□□ -0.37
MCF2L-203ENST00000375604 TMEM256-PLSCR3K7ERE1 68 aa12.72□□□□□ -0.37
MCF2L-203ENST00000375604 MED12LQ86YW9 2145 aa12.72□□□□□ -0.37
MCF2L-203ENST00000375604 AVPP01185 164 aa12.72□□□□□ -0.37
MCF2L-203ENST00000375604 IGLC6P0CF74 106 aa12.72□□□□□ -0.37
MCF2L-203ENST00000375604 SHISA2Q6UWI4 295 aa12.72□□□□□ -0.37
MCF2L-203ENST00000375604 IGLV4-3A0A075B6K6 122 aa12.72□□□□□ -0.37
MCF2L-203ENST00000375604 COA6Q5JTJ3 125 aaKnown RBP12.72□□□□□ -0.37
MCF2L-203ENST00000375604 SPATA12Q7Z6I5 190 aa12.71□□□□□ -0.37
MCF2L-203ENST00000375604 TRBV6-8A0A0A6YYG3 113 aa12.71□□□□□ -0.37
MCF2L-203ENST00000375604 TEN1Q86WV5 123 aa12.7□□□□□ -0.38
MCF2L-203ENST00000375604 MAPKAPK5-AS1Q8N8E1 139 aa12.7□□□□□ -0.38
MCF2L-203ENST00000375604 TMEM223A0PJW6 202 aa12.69□□□□□ -0.38
MCF2L-203ENST00000375604 M0QY20 66 aa12.69□□□□□ -0.38
MCF2L-203ENST00000375604 WFDC10BQ8IUB3 73 aa12.69□□□□□ -0.38
MCF2L-203ENST00000375604 IL17DQ8TAD2 202 aa12.69□□□□□ -0.38
MCF2L-203ENST00000375604 RNF185Q96GF1 192 aa12.69□□□□□ -0.38
MCF2L-203ENST00000375604 HIGD1BQ9P298 99 aa12.69□□□□□ -0.38
MCF2L-203ENST00000375604 DSCAMO60469 2012 aa12.69□□□□□ -0.38
MCF2L-203ENST00000375604 SDIM1Q6ZPB5 146 aa12.68□□□□□ -0.38
MCF2L-203ENST00000375604 RNASE8Q8TDE3 154 aaKnown RBP12.68□□□□□ -0.38
MCF2L-203ENST00000375604 UFSP1Q6NVU6 142 aa12.68□□□□□ -0.38
MCF2L-203ENST00000375604 GOLGB1Q14789 3259 aaKnown RBP12.68□□□□□ -0.38
MCF2L-203ENST00000375604 TEX49A0A1B0GTD5 131 aa12.68□□□□□ -0.38
MCF2L-203ENST00000375604 GAS8-AS1O95177 125 aa12.68□□□□□ -0.38
MCF2L-203ENST00000375604 TMEM258P61165 79 aa12.68□□□□□ -0.38
MCF2L-203ENST00000375604 C14orf177Q52M58 125 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms