RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 SNCGO76070 127 aa8.73□□□□□ -1.01
MCF2L-202ENST00000375597 FBXL19-AS1Q494R0 122 aa8.73□□□□□ -1.01
MCF2L-202ENST00000375597 TEX29Q8N6K0 151 aa8.73□□□□□ -1.01
MCF2L-202ENST00000375597 CDIP1Q9H305 208 aa8.73□□□□□ -1.01
MCF2L-202ENST00000375597 HOXD3P31249 432 aaPredicted RBP8.73□□□□□ -1.01
MCF2L-202ENST00000375597 MEIG1Q5JSS6 88 aa8.73□□□□□ -1.01
MCF2L-202ENST00000375597 LYRM7Q5U5X0 104 aa8.73□□□□□ -1.01
MCF2L-202ENST00000375597 C2orf82Q6UX34 121 aa8.73□□□□□ -1.01
MCF2L-202ENST00000375597 TEN1Q86WV5 123 aa8.73□□□□□ -1.01
MCF2L-202ENST00000375597 DYNLRB2Q8TF09 96 aa8.73□□□□□ -1.01
MCF2L-202ENST00000375597 IGHV3-30-3P0DP02 117 aa8.72□□□□□ -1.01
MCF2L-202ENST00000375597 LINC00315P59091 139 aa8.72□□□□□ -1.01
MCF2L-202ENST00000375597 M0QY20 66 aa8.72□□□□□ -1.01
MCF2L-202ENST00000375597 SOCS3O14543 225 aa8.72□□□□□ -1.01
MCF2L-202ENST00000375597 EIF4EBP3O60516 100 aaPredicted RBP8.72□□□□□ -1.01
MCF2L-202ENST00000375597 CRLF1O75462 422 aa8.72□□□□□ -1.01
MCF2L-202ENST00000375597 ZNF22P17026 224 aaPredicted RBP8.72□□□□□ -1.01
MCF2L-202ENST00000375597 HECTD1Q9ULT8 2610 aa8.72□□□□□ -1.01
MCF2L-202ENST00000375597 POLR2KP53803 58 aaKnown RBP8.71□□□□□ -1.01
MCF2L-202ENST00000375597 SRSF2Q01130 221 aaKnown RBP8.71□□□□□ -1.01
MCF2L-202ENST00000375597 ADAMTSL4-AS1Q5T5F5 129 aa8.71□□□□□ -1.01
MCF2L-202ENST00000375597 Q6ZSN1 163 aa8.71□□□□□ -1.01
MCF2L-202ENST00000375597 FLNBO75369 2602 aaKnown RBP8.71□□□□□ -1.01
MCF2L-202ENST00000375597 COX6B1P14854 86 aa8.71□□□□□ -1.01
MCF2L-202ENST00000375597 DCANP1Q8TF63 244 aa8.71□□□□□ -1.01
MCF2L-202ENST00000375597 USMG5Q96IX5 58 aa8.71□□□□□ -1.01
MCF2L-202ENST00000375597 TRGV1A0A0A0MS02 117 aa8.71□□□□□ -1.02
MCF2L-202ENST00000375597 TRAV4A0A0B4J268 109 aa8.71□□□□□ -1.02
MCF2L-202ENST00000375597 RHODO00212 210 aa8.71□□□□□ -1.02
MCF2L-202ENST00000375597 IGHG2P01859 326 aa8.71□□□□□ -1.02
MCF2L-202ENST00000375597 PPP1R17O96001 155 aa8.7□□□□□ -1.02
MCF2L-202ENST00000375597 UBE2D1P51668 147 aa8.7□□□□□ -1.02
MCF2L-202ENST00000375597 SLC25A29Q8N8R3 303 aa8.7□□□□□ -1.02
MCF2L-202ENST00000375597 MRPL53Q96EL3 112 aaKnown RBP8.7□□□□□ -1.02
MCF2L-202ENST00000375597 IGLV4-3A0A075B6K6 122 aa8.7□□□□□ -1.02
MCF2L-202ENST00000375597 I3L3M4 83 aa8.7□□□□□ -1.02
MCF2L-202ENST00000375597 TRIAP1O43715 76 aa8.7□□□□□ -1.02
MCF2L-202ENST00000375597 RBMY1A1P0DJD3 496 aaKnown RBP8.7□□□□□ -1.02
MCF2L-202ENST00000375597 RBMY1CP0DJD4 496 aa8.7□□□□□ -1.02
MCF2L-202ENST00000375597 RBMY1FQ15415 496 aaKnown RBP8.7□□□□□ -1.02
MCF2L-202ENST00000375597 ZFAND6Q6FIF0 208 aa8.7□□□□□ -1.02
MCF2L-202ENST00000375597 IGHV4-4A0A075B6R2 117 aa8.69□□□□□ -1.02
MCF2L-202ENST00000375597 A0A0J9YX75 114 aa8.69□□□□□ -1.02
MCF2L-202ENST00000375597 A0A0J9YXY3 114 aa8.69□□□□□ -1.02
MCF2L-202ENST00000375597 M0R2P5 195 aa8.69□□□□□ -1.02
MCF2L-202ENST00000375597 RPL13AP40429 203 aaKnown RBP8.69□□□□□ -1.02
MCF2L-202ENST00000375597 GAGE2BQ13066 116 aa8.69□□□□□ -1.02
MCF2L-202ENST00000375597 GAGE2EQ4V326 116 aa8.69□□□□□ -1.02
MCF2L-202ENST00000375597 C20orf203Q8NBC4 194 aa8.69□□□□□ -1.02
MCF2L-202ENST00000375597 GAGE2DQ9UEU5 116 aa8.69□□□□□ -1.02
MCF2L-202ENST00000375597 KIF25-AS1Q9Y6Z4 181 aa8.69□□□□□ -1.02
MCF2L-202ENST00000375597 SPATA25Q9BR10 227 aa8.68□□□□□ -1.02
MCF2L-202ENST00000375597 SETXQ7Z333 2677 aaKnown RBP8.68□□□□□ -1.02
MCF2L-202ENST00000375597 TRAV8-4A0A0B4J246 113 aa8.68□□□□□ -1.02
MCF2L-202ENST00000375597 IGHV3-33P01772 117 aa8.68□□□□□ -1.02
MCF2L-202ENST00000375597 PLA2G2AP14555 144 aa8.68□□□□□ -1.02
MCF2L-202ENST00000375597 UCNP55089 124 aa8.68□□□□□ -1.02
MCF2L-202ENST00000375597 LINC00467Q9BRT7 94 aa8.68□□□□□ -1.02
MCF2L-202ENST00000375597 CDKN2A-AS1Q9UH64 79 aa8.68□□□□□ -1.02
MCF2L-202ENST00000375597 GAGE12JA6NER3 117 aa8.68□□□□□ -1.02
MCF2L-202ENST00000375597 RNASE1P07998 156 aaKnown RBP8.68□□□□□ -1.02
MCF2L-202ENST00000375597 GAGE4Q13068 117 aa8.68□□□□□ -1.02
MCF2L-202ENST00000375597 GAGE5Q13069 117 aa8.68□□□□□ -1.02
MCF2L-202ENST00000375597 PAPPA-AS1Q5QFB9 102 aa8.68□□□□□ -1.02
MCF2L-202ENST00000375597 TMEM61Q8N0U2 210 aa8.68□□□□□ -1.02
MCF2L-202ENST00000375597 TMEM141Q96I45 108 aa8.68□□□□□ -1.02
MCF2L-202ENST00000375597 A6NDX4 124 aa8.67□□□□□ -1.02
MCF2L-202ENST00000375597 C15orf53Q8NAA6 179 aa8.67□□□□□ -1.02
MCF2L-202ENST00000375597 LENEPQ9Y5L5 61 aa8.67□□□□□ -1.02
MCF2L-202ENST00000375597 KLLNB2CW77 178 aa8.67□□□□□ -1.02
MCF2L-202ENST00000375597 LINC01620Q4KN68 170 aa8.67□□□□□ -1.02
MCF2L-202ENST00000375597 RPL35AP18077 110 aaKnown RBP8.67□□□□□ -1.02
MCF2L-202ENST00000375597 C10orf105Q8TEF2 133 aa8.67□□□□□ -1.02
MCF2L-202ENST00000375597 APCP25054 2843 aa8.67□□□□□ -1.02
MCF2L-202ENST00000375597 A0A096LPF7 62 aa8.66□□□□□ -1.02
MCF2L-202ENST00000375597 LINC01546A6NGU7 62 aa8.66□□□□□ -1.02
MCF2L-202ENST00000375597 TMEM223A0PJW6 202 aa8.66□□□□□ -1.02
MCF2L-202ENST00000375597 CLPSL2Q6UWE3 100 aa8.66□□□□□ -1.02
MCF2L-202ENST00000375597 WFDC10AQ9H1F0 79 aa8.66□□□□□ -1.02
MCF2L-202ENST00000375597 Q9H8V8 135 aa8.66□□□□□ -1.02
MCF2L-202ENST00000375597 LEPROTO15243 131 aa8.65□□□□□ -1.02
MCF2L-202ENST00000375597 UBE2D3P61077 147 aa8.65□□□□□ -1.02
MCF2L-202ENST00000375597 UBE2D2P62837 147 aa8.65□□□□□ -1.02
MCF2L-202ENST00000375597 HIST2H2BCQ6DN03 193 aa8.65□□□□□ -1.02
MCF2L-202ENST00000375597 POM121L12Q8N7R1 296 aa8.65□□□□□ -1.02
MCF2L-202ENST00000375597 COX6CP09669 75 aa8.65□□□□□ -1.03
MCF2L-202ENST00000375597 ATXN8Q156A1 80 aa8.65□□□□□ -1.03
MCF2L-202ENST00000375597 TIMM17AQ99595 171 aa8.65□□□□□ -1.03
MCF2L-202ENST00000375597 TRBV27A0A0K0K1C4 114 aa8.64□□□□□ -1.03
MCF2L-202ENST00000375597 B4DSR2 109 aa8.64□□□□□ -1.03
MCF2L-202ENST00000375597 Q9HAA7 133 aa8.64□□□□□ -1.03
MCF2L-202ENST00000375597 H3BMM0 161 aa8.64□□□□□ -1.03
MCF2L-202ENST00000375597 PRIMA1Q86XR5 153 aa8.64□□□□□ -1.03
MCF2L-202ENST00000375597 UBE2WQ96B02 151 aa8.64□□□□□ -1.03
MCF2L-202ENST00000375597 PIK3CD-AS1Q5SR53 167 aa8.64□□□□□ -1.03
MCF2L-202ENST00000375597 CCDC179H3BU77 68 aa8.63□□□□□ -1.03
MCF2L-202ENST00000375597 NXPH4O95158 308 aa8.63□□□□□ -1.03
MCF2L-202ENST00000375597 ICOSQ9Y6W8 199 aa8.63□□□□□ -1.03
MCF2L-202ENST00000375597 UBR5O95071 2799 aaPredicted RBP8.63□□□□□ -1.03
MCF2L-202ENST00000375597 ITPR2Q14571 2701 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms