RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 UBE2DNLQ8IWF7 75 aa4.88□□□□□ -1.63
UBR4-204ENST00000375254 ZNRD1Q9P1U0 126 aa4.88□□□□□ -1.63
UBR4-204ENST00000375254 TFF2Q03403 129 aa4.88□□□□□ -1.63
UBR4-204ENST00000375254 A0A1B0GU69 56 aa4.88□□□□□ -1.63
UBR4-204ENST00000375254 CACNA1SQ13698 1873 aa4.88□□□□□ -1.63
UBR4-204ENST00000375254 PSMG3-AS1Q96PY0 264 aa4.88□□□□□ -1.63
UBR4-204ENST00000375254 SLX4Q8IY92 1834 aa4.88□□□□□ -1.63
UBR4-204ENST00000375254 A0A087WVE0 104 aa4.88□□□□□ -1.63
UBR4-204ENST00000375254 ADAMTSL4-AS1Q5T5F5 129 aa4.88□□□□□ -1.63
UBR4-204ENST00000375254 IGFL3Q6UXB1 125 aa4.88□□□□□ -1.63
UBR4-204ENST00000375254 LYNX1G3V0Z9 82 aa4.87□□□□□ -1.63
UBR4-204ENST00000375254 LYNX1P0DP58 116 aa4.87□□□□□ -1.63
UBR4-204ENST00000375254 IL17DQ8TAD2 202 aa4.87□□□□□ -1.63
UBR4-204ENST00000375254 Q8N9W7 124 aa4.87□□□□□ -1.63
UBR4-204ENST00000375254 RNASE3P12724 160 aaKnown RBP4.87□□□□□ -1.63
UBR4-204ENST00000375254 Q1T7F1 81 aa4.87□□□□□ -1.63
UBR4-204ENST00000375254 IGLV2-18A0A075B6J9 118 aa4.86□□□□□ -1.63
UBR4-204ENST00000375254 IGLV1-47P01700 117 aa4.86□□□□□ -1.63
UBR4-204ENST00000375254 PRR4Q16378 134 aa4.86□□□□□ -1.63
UBR4-204ENST00000375254 ROBO1Q9Y6N7 1651 aa4.86□□□□□ -1.63
UBR4-204ENST00000375254 RITA1Q96K30 269 aa4.86□□□□□ -1.63
UBR4-204ENST00000375254 MYO9AB2RTY4 2548 aa4.86□□□□□ -1.63
UBR4-204ENST00000375254 DKK4Q9UBT3 224 aa4.86□□□□□ -1.63
UBR4-204ENST00000375254 E7EUB6 86 aa4.86□□□□□ -1.63
UBR4-204ENST00000375254 CEMP1Q6PRD7 247 aaPredicted RBP4.86□□□□□ -1.63
UBR4-204ENST00000375254 SPG11Q96JI7 2443 aa4.86□□□□□ -1.63
UBR4-204ENST00000375254 RPL37AP8A6NKH3 93 aa4.86□□□□□ -1.63
UBR4-204ENST00000375254 KLLNB2CW77 178 aa4.86□□□□□ -1.63
UBR4-204ENST00000375254 MON2Q7Z3U7 1717 aa4.85□□□□□ -1.63
UBR4-204ENST00000375254 H0Y9P7 68 aa4.85□□□□□ -1.63
UBR4-204ENST00000375254 C5orf56Q8N8D9 126 aa4.85□□□□□ -1.63
UBR4-204ENST00000375254 REG3AQ06141 175 aa4.85□□□□□ -1.63
UBR4-204ENST00000375254 KIF13AQ9H1H9 1805 aa4.85□□□□□ -1.63
UBR4-204ENST00000375254 CTSZQ9UBR2 303 aa4.85□□□□□ -1.63
UBR4-204ENST00000375254 A0A087WYN8 130 aa4.85□□□□□ -1.63
UBR4-204ENST00000375254 PRRC2AP48634 2157 aaKnown RBP4.85□□□□□ -1.63
UBR4-204ENST00000375254 TNFRSF13BO14836 293 aaPredicted RBP4.85□□□□□ -1.63
UBR4-204ENST00000375254 IGHV4-59P01825 116 aa4.84□□□□□ -1.63
UBR4-204ENST00000375254 Q8N7P7 452 aa4.84□□□□□ -1.63
UBR4-204ENST00000375254 EDN2P20800 178 aa4.84□□□□□ -1.63
UBR4-204ENST00000375254 LINC00242Q5T6M2 205 aa4.84□□□□□ -1.63
UBR4-204ENST00000375254 LINC01600Q96MT4 127 aa4.84□□□□□ -1.63
UBR4-204ENST00000375254 LINC00474Q9P2X8 69 aa4.84□□□□□ -1.63
UBR4-204ENST00000375254 C3orf84H3BNL1 204 aa4.84□□□□□ -1.63
UBR4-204ENST00000375254 LOC101927531A0A1B0GV80 90 aa4.84□□□□□ -1.64
UBR4-204ENST00000375254 IGHV4-30-2A0A087WSY4 118 aa4.83□□□□□ -1.64
UBR4-204ENST00000375254 C1orf137Q5JT78 98 aa4.83□□□□□ -1.64
UBR4-204ENST00000375254 GLI3P10071 1580 aa4.83□□□□□ -1.64
UBR4-204ENST00000375254 Q6ZTC4 211 aa4.83□□□□□ -1.64
UBR4-204ENST00000375254 IGLV10-54A0A075B6I4 117 aa4.83□□□□□ -1.64
UBR4-204ENST00000375254 DEFB114Q30KQ6 69 aa4.83□□□□□ -1.64
UBR4-204ENST00000375254 KDM3BQ7LBC6 1761 aa4.83□□□□□ -1.64
UBR4-204ENST00000375254 VWCEQ96DN2 955 aa4.83□□□□□ -1.64
UBR4-204ENST00000375254 DEFB123Q8N688 67 aa4.83□□□□□ -1.64
UBR4-204ENST00000375254 DDX60LQ5H9U9 1706 aaKnown RBP4.82□□□□□ -1.64
UBR4-204ENST00000375254 CLPSL2Q6UWE3 100 aa4.82□□□□□ -1.64
UBR4-204ENST00000375254 Q6ZSV7 163 aa4.82□□□□□ -1.64
UBR4-204ENST00000375254 C11orf72Q8NBR9 251 aa4.82□□□□□ -1.64
UBR4-204ENST00000375254 ATP1A1-AS1Q5TC04 95 aa4.82□□□□□ -1.64
UBR4-204ENST00000375254 KLK12Q9UKR0 248 aa4.82□□□□□ -1.64
UBR4-204ENST00000375254 A0A096LNJ9 63 aa4.82□□□□□ -1.64
UBR4-204ENST00000375254 LINC00959A0A1B0GUT2 108 aa4.82□□□□□ -1.64
UBR4-204ENST00000375254 RREB1Q92766 1687 aa4.82□□□□□ -1.64
UBR4-204ENST00000375254 PATE3B3GLJ2 98 aa4.81□□□□□ -1.64
UBR4-204ENST00000375254 SYCNQ0VAF6 134 aa4.81□□□□□ -1.64
UBR4-204ENST00000375254 A0A1B0GUV1 79 aa4.81□□□□□ -1.64
UBR4-204ENST00000375254 FHL2Q14192 279 aa4.81□□□□□ -1.64
UBR4-204ENST00000375254 WFDC13Q8IUB5 93 aa4.81□□□□□ -1.64
UBR4-204ENST00000375254 LY75O60449 1722 aa4.81□□□□□ -1.64
UBR4-204ENST00000375254 SMAD5-AS1Q9Y6J3 95 aa4.81□□□□□ -1.64
UBR4-204ENST00000375254 NUP188Q5SRE5 1749 aa4.81□□□□□ -1.64
UBR4-204ENST00000375254 AKAP12Q02952 1782 aa4.81□□□□□ -1.64
UBR4-204ENST00000375254 H7BZZ5 65 aa4.81□□□□□ -1.64
UBR4-204ENST00000375254 SPANXA2-OT1Q8N9U9 137 aa4.81□□□□□ -1.64
UBR4-204ENST00000375254 DOCK4Q8N1I0 1966 aa4.81□□□□□ -1.64
UBR4-204ENST00000375254 KPRPQ5T749 579 aaPredicted RBP4.81□□□□□ -1.64
UBR4-204ENST00000375254 SPATA3Q8NHX4 192 aa4.8□□□□□ -1.64
UBR4-204ENST00000375254 C4orf3Q8WVX3 66 aa4.8□□□□□ -1.64
UBR4-204ENST00000375254 IGLV5-39A0A0G2JS06 123 aa4.8□□□□□ -1.64
UBR4-204ENST00000375254 SMIM1B2RUZ4 78 aa4.8□□□□□ -1.64
UBR4-204ENST00000375254 UQCR11O14957 56 aa4.8□□□□□ -1.64
UBR4-204ENST00000375254 EGFEM1PQ0D2K5 195 aa4.8□□□□□ -1.64
UBR4-204ENST00000375254 ARHGAP21Q5T5U3 1957 aa4.8□□□□□ -1.64
UBR4-204ENST00000375254 XAGE1AQ9HD64 81 aa4.8□□□□□ -1.64
UBR4-204ENST00000375254 TRAV22A0A0B4J277 110 aa4.8□□□□□ -1.64
UBR4-204ENST00000375254 AFDNP55196 1824 aaKnown RBP4.8□□□□□ -1.64
UBR4-204ENST00000375254 ZNF503-AS2A6NEH8 195 aa4.8□□□□□ -1.64
UBR4-204ENST00000375254 LINC00482Q8N8I6 264 aa4.8□□□□□ -1.64
UBR4-204ENST00000375254 HIVEP2P31629 2446 aa4.8□□□□□ -1.64
UBR4-204ENST00000375254 LY6LH3BQJ8 138 aa4.8□□□□□ -1.64
UBR4-204ENST00000375254 ANKRD31Q8N7Z5 1873 aa4.79□□□□□ -1.64
UBR4-204ENST00000375254 CHCHD7Q9BUK0 85 aa4.79□□□□□ -1.64
UBR4-204ENST00000375254 CDK5RAP2Q96SN8 1893 aa4.79□□□□□ -1.64
UBR4-204ENST00000375254 POLR2AP24928 1970 aaKnown RBP4.79□□□□□ -1.64
UBR4-204ENST00000375254 NOTCH2Q04721 2471 aa4.79□□□□□ -1.64
UBR4-204ENST00000375254 MAST2Q6P0Q8 1798 aa4.79□□□□□ -1.64
UBR4-204ENST00000375254 ZNF843Q8N446 348 aa4.79□□□□□ -1.64
UBR4-204ENST00000375254 COL16A1Q07092 1604 aaPredicted RBP4.79□□□□□ -1.64
UBR4-204ENST00000375254 AGRNO00468 2067 aa4.79□□□□□ -1.64
UBR4-204ENST00000375254 AVPP01185 164 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms