RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 PHLDA3Q9Y5J5 127 aa6.5□□□□□ -1.37
UBR4-201ENST00000375218 TRAV3A0A0B4J244 114 aa6.49□□□□□ -1.37
UBR4-201ENST00000375218 MYOZ3Q8TDC0 251 aa6.49□□□□□ -1.37
UBR4-201ENST00000375218 AGRNO00468 2067 aa6.49□□□□□ -1.37
UBR4-201ENST00000375218 IQCF6A8MYZ5 107 aa6.49□□□□□ -1.37
UBR4-201ENST00000375218 ATP5EP56381 51 aaPredicted RBP6.49□□□□□ -1.37
UBR4-201ENST00000375218 C18orf65Q6ZTR6 163 aa6.49□□□□□ -1.37
UBR4-201ENST00000375218 LINC00269Q8N2A0 174 aa6.49□□□□□ -1.37
UBR4-201ENST00000375218 DNAH7Q8WXX0 4024 aa6.49□□□□□ -1.37
UBR4-201ENST00000375218 H3BMM0 161 aa6.49□□□□□ -1.37
UBR4-201ENST00000375218 ATP11AUNQ6ZP68 121 aa6.49□□□□□ -1.37
UBR4-201ENST00000375218 UBE2WQ96B02 151 aa6.49□□□□□ -1.37
UBR4-201ENST00000375218 C11orf71Q6IPW1 123 aa6.48□□□□□ -1.37
UBR4-201ENST00000375218 M0R135 149 aa6.48□□□□□ -1.37
UBR4-201ENST00000375218 ZNF497Q6ZNH5 498 aa6.48□□□□□ -1.37
UBR4-201ENST00000375218 C2orf70A6NJV1 201 aa6.48□□□□□ -1.37
UBR4-201ENST00000375218 K7EQG2 157 aa6.48□□□□□ -1.37
UBR4-201ENST00000375218 NDUFA12Q9UI09 145 aa6.48□□□□□ -1.37
UBR4-201ENST00000375218 MRPL33O75394 65 aaKnown RBP6.47□□□□□ -1.37
UBR4-201ENST00000375218 ICE1Q9Y2F5 2266 aa6.47□□□□□ -1.37
UBR4-201ENST00000375218 TRBV6-7A0A0A0MS04 114 aa6.47□□□□□ -1.37
UBR4-201ENST00000375218 TMEM170BQ5T4T1 132 aa6.47□□□□□ -1.37
UBR4-201ENST00000375218 SCGB3A1Q96QR1 104 aa6.47□□□□□ -1.37
UBR4-201ENST00000375218 IGKV1D-17A0A075B6S4 117 aa6.47□□□□□ -1.37
UBR4-201ENST00000375218 IGKV3-15P01624 115 aa6.47□□□□□ -1.37
UBR4-201ENST00000375218 C15orf32Q32M92 178 aa6.47□□□□□ -1.37
UBR4-201ENST00000375218 LEPROTL1O95214 131 aa6.47□□□□□ -1.37
UBR4-201ENST00000375218 TFF3Q07654 80 aa6.47□□□□□ -1.37
UBR4-201ENST00000375218 LYPD5Q6UWN5 251 aa6.47□□□□□ -1.37
UBR4-201ENST00000375218 ARHGAP5-AS1Q96IT6 56 aa6.47□□□□□ -1.37
UBR4-201ENST00000375218 FBN1P35555 2871 aaKnown RBP6.46□□□□□ -1.37
UBR4-201ENST00000375218 NBASA2RRP1 2371 aa6.46□□□□□ -1.37
UBR4-201ENST00000375218 CEBPZOSA8MTT3 80 aa6.46□□□□□ -1.37
UBR4-201ENST00000375218 XCL1P47992 114 aa6.46□□□□□ -1.37
UBR4-201ENST00000375218 PKD1L1Q8TDX9 2849 aa6.46□□□□□ -1.37
UBR4-201ENST00000375218 IGHV3-64DA0A0J9YX35 117 aa6.46□□□□□ -1.38
UBR4-201ENST00000375218 PROP1O75360 226 aa6.46□□□□□ -1.38
UBR4-201ENST00000375218 IGLV1-44P01699 117 aa6.46□□□□□ -1.38
UBR4-201ENST00000375218 PIGYQ3MUY2 71 aa6.46□□□□□ -1.38
UBR4-201ENST00000375218 POLQO75417 2590 aa6.46□□□□□ -1.38
UBR4-201ENST00000375218 IGHV3OR15-7A0A075B7D8 119 aa6.46□□□□□ -1.38
UBR4-201ENST00000375218 USF3Q68DE3 2245 aa6.45□□□□□ -1.38
UBR4-201ENST00000375218 SSBP1Q04837 148 aaKnown RBP6.45□□□□□ -1.38
UBR4-201ENST00000375218 ZNF71Q9NQZ8 489 aaPredicted RBP6.45□□□□□ -1.38
UBR4-201ENST00000375218 ROS1P08922 2347 aa6.45□□□□□ -1.38
UBR4-201ENST00000375218 K7EMI3 77 aa6.45□□□□□ -1.38
UBR4-201ENST00000375218 TIMM8BQ9Y5J9 83 aaPredicted RBP6.45□□□□□ -1.38
UBR4-201ENST00000375218 TEX49A0A1B0GTD5 131 aa6.45□□□□□ -1.38
UBR4-201ENST00000375218 ESRGQ1W209 222 aa6.45□□□□□ -1.38
UBR4-201ENST00000375218 Q6ZRP5 223 aa6.45□□□□□ -1.38
UBR4-201ENST00000375218 ZNF462Q96JM2 2506 aa6.44□□□□□ -1.38
UBR4-201ENST00000375218 HELZ2Q9BYK8 2649 aaKnown RBP6.44□□□□□ -1.38
UBR4-201ENST00000375218 ACYP1P07311 99 aa6.44□□□□□ -1.38
UBR4-201ENST00000375218 IGHV4-38-2P0DP08 117 aa6.44□□□□□ -1.38
UBR4-201ENST00000375218 NPYP01303 97 aa6.44□□□□□ -1.38
UBR4-201ENST00000375218 TSPEAR-AS2P59090 65 aa6.44□□□□□ -1.38
UBR4-201ENST00000375218 DEFB109BQ30KR1 87 aa6.44□□□□□ -1.38
UBR4-201ENST00000375218 PATE2Q6UY27 113 aa6.44□□□□□ -1.38
UBR4-201ENST00000375218 TCRBV4S1A1TA0A5B7 111 aa6.44□□□□□ -1.38
UBR4-201ENST00000375218 A6NN06 94 aa6.44□□□□□ -1.38
UBR4-201ENST00000375218 C3orf84H3BNL1 204 aa6.44□□□□□ -1.38
UBR4-201ENST00000375218 EIF4EBP1Q13541 118 aaPredicted RBP6.44□□□□□ -1.38
UBR4-201ENST00000375218 A0A0J9YXY3 114 aa6.43□□□□□ -1.38
UBR4-201ENST00000375218 IGKV3D-20A0A0C4DH25 116 aa6.43□□□□□ -1.38
UBR4-201ENST00000375218 B4DSR2 109 aa6.43□□□□□ -1.38
UBR4-201ENST00000375218 IGHV1-18A0A0C4DH31 117 aa6.43□□□□□ -1.38
UBR4-201ENST00000375218 H7BZZ5 65 aa6.43□□□□□ -1.38
UBR4-201ENST00000375218 ZNF22P17026 224 aaPredicted RBP6.43□□□□□ -1.38
UBR4-201ENST00000375218 MYMXA0A1B0GTQ4 84 aa6.42□□□□□ -1.38
UBR4-201ENST00000375218 NMES1Q9C002 83 aa6.42□□□□□ -1.38
UBR4-201ENST00000375218 C11orf1Q9H5F2 150 aa6.42□□□□□ -1.38
UBR4-201ENST00000375218 USP9YO00507 2555 aaPredicted RBP6.42□□□□□ -1.38
UBR4-201ENST00000375218 MYO18BQ8IUG5 2567 aa6.42□□□□□ -1.38
UBR4-201ENST00000375218 ACACBO00763 2458 aa6.42□□□□□ -1.38
UBR4-201ENST00000375218 IGHV4-39P01824 125 aa6.42□□□□□ -1.38
UBR4-201ENST00000375218 CNEP1R1Q8N9A8 125 aa6.42□□□□□ -1.38
UBR4-201ENST00000375218 ABCA4P78363 2273 aa6.42□□□□□ -1.38
UBR4-201ENST00000375218 IGHV3-48P01763 117 aa6.41□□□□□ -1.38
UBR4-201ENST00000375218 TMEM30CPA0ZSE6 113 aa6.41□□□□□ -1.38
UBR4-201ENST00000375218 GNRH2O43555 120 aa6.41□□□□□ -1.38
UBR4-201ENST00000375218 DHRS4-AS1Q9P1J3 65 aa6.41□□□□□ -1.38
UBR4-201ENST00000375218 FASNP49327 2511 aaKnown RBP6.41□□□□□ -1.38
UBR4-201ENST00000375218 F8WEM9 126 aa6.41□□□□□ -1.38
UBR4-201ENST00000375218 HIST1H4AP62805 103 aaKnown RBP6.41□□□□□ -1.38
UBR4-201ENST00000375218 C17orf58Q2M2W7 97 aa6.41□□□□□ -1.38
UBR4-201ENST00000375218 BAHCC1Q9P281 2608 aa6.4□□□□□ -1.38
UBR4-201ENST00000375218 GNB1P62873 340 aa6.4□□□□□ -1.38
UBR4-201ENST00000375218 ITPR3Q14573 2671 aa6.4□□□□□ -1.38
UBR4-201ENST00000375218 PKDREJQ9NTG1 2253 aa6.4□□□□□ -1.38
UBR4-201ENST00000375218 IGLV5-52A0A0A0MRZ9 124 aa6.4□□□□□ -1.39
UBR4-201ENST00000375218 CGB3P0DN86 165 aa6.4□□□□□ -1.39
UBR4-201ENST00000375218 CGB7P0DN87 165 aa6.4□□□□□ -1.39
UBR4-201ENST00000375218 FAM223BA6NKX1 122 aa6.4□□□□□ -1.39
UBR4-201ENST00000375218 FAM229BQ4G0N7 80 aa6.4□□□□□ -1.39
UBR4-201ENST00000375218 UBALD1Q8TB05 177 aa6.4□□□□□ -1.39
UBR4-201ENST00000375218 DOPEY1Q5JWR5 2465 aa6.39□□□□□ -1.39
UBR4-201ENST00000375218 IGLV3-9A0A075B6K5 115 aa6.39□□□□□ -1.39
UBR4-201ENST00000375218 HCG22E2RYF7 251 aa6.39□□□□□ -1.39
UBR4-201ENST00000375218 NOTCH2NLQ7Z3S9 236 aa6.39□□□□□ -1.39
UBR4-201ENST00000375218 DYNLRB1Q9NP97 96 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms