RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 RBMY1CP0DJD4 496 aa13.12□□□□□ -0.31
PHF1-201ENST00000374512 RBMY1FQ15415 496 aaKnown RBP13.12□□□□□ -0.31
PHF1-201ENST00000374512 LINC01600Q96MT4 127 aa13.12□□□□□ -0.31
PHF1-201ENST00000374512 IGHV1-58A0A0C4DH39 117 aa13.12□□□□□ -0.31
PHF1-201ENST00000374512 TINCRA0A1B0GVN0 87 aa13.12□□□□□ -0.31
PHF1-201ENST00000374512 FAM104AQ969W3 186 aa13.12□□□□□ -0.31
PHF1-201ENST00000374512 RAX2Q96IS3 184 aa13.12□□□□□ -0.31
PHF1-201ENST00000374512 LINC00467Q9BRT7 94 aa13.12□□□□□ -0.31
PHF1-201ENST00000374512 PRRC2AP48634 2157 aaKnown RBP13.11□□□□□ -0.31
PHF1-201ENST00000374512 H3BMM0 161 aa13.11□□□□□ -0.31
PHF1-201ENST00000374512 SLC25A20O43772 301 aa13.11□□□□□ -0.31
PHF1-201ENST00000374512 EIF4EBP3O60516 100 aaPredicted RBP13.11□□□□□ -0.31
PHF1-201ENST00000374512 ZNF415Q09FC8 603 aa13.11□□□□□ -0.31
PHF1-201ENST00000374512 SPXQ9BT56 116 aa13.11□□□□□ -0.31
PHF1-201ENST00000374512 POLQO75417 2590 aa13.11□□□□□ -0.31
PHF1-201ENST00000374512 IGHV3-64A0A075B6Q5 118 aa13.11□□□□□ -0.31
PHF1-201ENST00000374512 ANKRD29Q8N6D5 301 aa13.11□□□□□ -0.31
PHF1-201ENST00000374512 RNF183Q96D59 192 aa13.11□□□□□ -0.31
PHF1-201ENST00000374512 DNAJC30Q96LL9 226 aa13.11□□□□□ -0.31
PHF1-201ENST00000374512 SPANXDQ9BXN6 97 aa13.11□□□□□ -0.31
PHF1-201ENST00000374512 SPANXCQ9NY87 97 aa13.11□□□□□ -0.31
PHF1-201ENST00000374512 CSMD2Q7Z408 3487 aa13.1□□□□□ -0.31
PHF1-201ENST00000374512 TRBV30A0A0K0K1B3 111 aa13.1□□□□□ -0.31
PHF1-201ENST00000374512 ATXN8Q156A1 80 aa13.1□□□□□ -0.31
PHF1-201ENST00000374512 PTPN13Q12923 2485 aa13.1□□□□□ -0.31
PHF1-201ENST00000374512 DEFB131AP59861 70 aa13.09□□□□□ -0.31
PHF1-201ENST00000374512 Q6ZUT4 128 aa13.09□□□□□ -0.31
PHF1-201ENST00000374512 DUX3Q96PT4 197 aa13.09□□□□□ -0.31
PHF1-201ENST00000374512 LITAFQ99732 161 aa13.09□□□□□ -0.31
PHF1-201ENST00000374512 KNCNA6PVL3 124 aa13.09□□□□□ -0.31
PHF1-201ENST00000374512 SPINK8P0C7L1 97 aa13.09□□□□□ -0.31
PHF1-201ENST00000374512 PEMTQ9UBM1 199 aa13.08□□□□□ -0.32
PHF1-201ENST00000374512 C9JAW5 83 aa13.08□□□□□ -0.32
PHF1-201ENST00000374512 VSIG2Q96IQ7 327 aa13.08□□□□□ -0.32
PHF1-201ENST00000374512 UBE2D4Q9Y2X8 147 aa13.08□□□□□ -0.32
PHF1-201ENST00000374512 SORL1Q92673 2214 aa13.08□□□□□ -0.32
PHF1-201ENST00000374512 CKS1BP61024 79 aa13.07□□□□□ -0.32
PHF1-201ENST00000374512 FHL3Q13643 280 aa13.07□□□□□ -0.32
PHF1-201ENST00000374512 CHCHD7Q9BUK0 85 aa13.07□□□□□ -0.32
PHF1-201ENST00000374512 IGHV3-73A0A0B4J1V6 119 aa13.07□□□□□ -0.32
PHF1-201ENST00000374512 HTN1P15515 57 aa13.07□□□□□ -0.32
PHF1-201ENST00000374512 SLURP1P55000 103 aa13.07□□□□□ -0.32
PHF1-201ENST00000374512 Q1RN00 199 aa13.07□□□□□ -0.32
PHF1-201ENST00000374512 Q96MF0 132 aa13.07□□□□□ -0.32
PHF1-201ENST00000374512 NDUFA12Q9UI09 145 aa13.07□□□□□ -0.32
PHF1-201ENST00000374512 PROK1P58294 105 aa13.06□□□□□ -0.32
PHF1-201ENST00000374512 Q8N2B8 174 aa13.06□□□□□ -0.32
PHF1-201ENST00000374512 TIMM17BO60830 172 aa13.05□□□□□ -0.32
PHF1-201ENST00000374512 IGHV3-53P01767 116 aa13.05□□□□□ -0.32
PHF1-201ENST00000374512 BEAN1Q3B7T3 259 aa13.05□□□□□ -0.32
PHF1-201ENST00000374512 YAE1D1Q9NRH1 226 aa13.05□□□□□ -0.32
PHF1-201ENST00000374512 XGP55808 180 aa13.05□□□□□ -0.32
PHF1-201ENST00000374512 MIAQ16674 131 aa13.05□□□□□ -0.32
PHF1-201ENST00000374512 DEFB136Q30KP8 78 aa13.05□□□□□ -0.32
PHF1-201ENST00000374512 RBMY1BA6NDE4 496 aaKnown RBP13.04□□□□□ -0.32
PHF1-201ENST00000374512 RBMY1EA6NEQ0 496 aaKnown RBP13.04□□□□□ -0.32
PHF1-201ENST00000374512 RBMY1DP0C7P1 496 aaKnown RBP13.04□□□□□ -0.32
PHF1-201ENST00000374512 LINC01620Q4KN68 170 aa13.04□□□□□ -0.32
PHF1-201ENST00000374512 C18orf65Q6ZTR6 163 aa13.04□□□□□ -0.32
PHF1-201ENST00000374512 ZANQ9Y493 2812 aa13.04□□□□□ -0.32
PHF1-201ENST00000374512 NAV2Q8IVL1 2488 aa13.04□□□□□ -0.32
PHF1-201ENST00000374512 TRAV8-3A0A0A6YYJ7 113 aa13.04□□□□□ -0.32
PHF1-201ENST00000374512 H7C2G1 150 aa13.04□□□□□ -0.32
PHF1-201ENST00000374512 MT-ATP8P03928 68 aa13.04□□□□□ -0.32
PHF1-201ENST00000374512 ZFAND6Q6FIF0 208 aa13.04□□□□□ -0.32
PHF1-201ENST00000374512 PRSS2P07478 247 aa13.03□□□□□ -0.32
PHF1-201ENST00000374512 IFITM1P13164 125 aa13.03□□□□□ -0.32
PHF1-201ENST00000374512 CEMP1Q6PRD7 247 aaPredicted RBP13.03□□□□□ -0.32
PHF1-201ENST00000374512 CLUHP3Q96NS8 147 aa13.03□□□□□ -0.32
PHF1-201ENST00000374512 CENPEQ02224 2701 aa13.03□□□□□ -0.32
PHF1-201ENST00000374512 TIRAPP58753 221 aa13.03□□□□□ -0.32
PHF1-201ENST00000374512 KRTAP1-3Q8IUG1 177 aa13.03□□□□□ -0.32
PHF1-201ENST00000374512 C11orf72Q8NBR9 251 aa13.03□□□□□ -0.32
PHF1-201ENST00000374512 TRBV10-2A0A0K0K1G8 114 aa13.02□□□□□ -0.33
PHF1-201ENST00000374512 COX6CP09669 75 aa13.02□□□□□ -0.33
PHF1-201ENST00000374512 Q6ZSN1 163 aa13.02□□□□□ -0.33
PHF1-201ENST00000374512 GEMIN7Q9H840 131 aaKnown RBP13.02□□□□□ -0.33
PHF1-201ENST00000374512 NACAE9PAV3 2078 aa13.02□□□□□ -0.33
PHF1-201ENST00000374512 RS1O15537 224 aa13.01□□□□□ -0.33
PHF1-201ENST00000374512 INSP01308 110 aa13.01□□□□□ -0.33
PHF1-201ENST00000374512 RPL13AP40429 203 aaKnown RBP13.01□□□□□ -0.33
PHF1-201ENST00000374512 TMEM61Q8N0U2 210 aa13.01□□□□□ -0.33
PHF1-201ENST00000374512 C4orf3Q8WVX3 66 aa13.01□□□□□ -0.33
PHF1-201ENST00000374512 LINC01587Q99440 93 aa13.01□□□□□ -0.33
PHF1-201ENST00000374512 CREBBPQ92793 2442 aa13.01□□□□□ -0.33
PHF1-201ENST00000374512 IGLV5-45A0A087WSX0 123 aa13.01□□□□□ -0.33
PHF1-201ENST00000374512 ADARB2-AS1A8MUL3 147 aa13.01□□□□□ -0.33
PHF1-201ENST00000374512 TRIAP1O43715 76 aa13.01□□□□□ -0.33
PHF1-201ENST00000374512 ADAMTSL4-AS1Q5T5F5 129 aa13.01□□□□□ -0.33
PHF1-201ENST00000374512 MAP6D1Q9H9H5 199 aa13.01□□□□□ -0.33
PHF1-201ENST00000374512 ABCA12Q86UK0 2595 aa13.01□□□□□ -0.33
PHF1-201ENST00000374512 ICOSQ9Y6W8 199 aa13□□□□□ -0.33
PHF1-201ENST00000374512 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.98□□□□□ -0.33
PHF1-201ENST00000374512 IGKV2-29A2NJV5 120 aaPredicted RBP12.98□□□□□ -0.33
PHF1-201ENST00000374512 KHDC1LQ5JSQ8 128 aa12.98□□□□□ -0.33
PHF1-201ENST00000374512 NDUFA1O15239 70 aa12.98□□□□□ -0.33
PHF1-201ENST00000374512 RNASE13Q5GAN3 156 aaKnown RBP12.98□□□□□ -0.33
PHF1-201ENST00000374512 DYNLRB2Q8TF09 96 aa12.98□□□□□ -0.33
PHF1-201ENST00000374512 Q9UF83 564 aa12.97□□□□□ -0.33
PHF1-201ENST00000374512 H3BT86 120 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms