RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 RHOHQ15669 191 aa11.57□□□□□ -0.56
CNKSR1-202ENST00000374253 SCGB1D4Q6XE38 83 aa11.57□□□□□ -0.56
CNKSR1-202ENST00000374253 ZNF418Q8TF45 676 aaPredicted RBP11.57□□□□□ -0.56
CNKSR1-202ENST00000374253 TRGV1A0A0A0MS02 117 aa11.57□□□□□ -0.56
CNKSR1-202ENST00000374253 GAGE10A6NGK3 116 aa11.57□□□□□ -0.56
CNKSR1-202ENST00000374253 RNASE8Q8TDE3 154 aaKnown RBP11.56□□□□□ -0.56
CNKSR1-202ENST00000374253 IGLV4-3A0A075B6K6 122 aa11.55□□□□□ -0.56
CNKSR1-202ENST00000374253 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.55□□□□□ -0.56
CNKSR1-202ENST00000374253 TRAV25A0A0B4J276 109 aa11.55□□□□□ -0.56
CNKSR1-202ENST00000374253 A0A0J9YXV3 536 aa11.55□□□□□ -0.56
CNKSR1-202ENST00000374253 IGKV2-29A2NJV5 120 aaPredicted RBP11.55□□□□□ -0.56
CNKSR1-202ENST00000374253 HILS1P60008 231 aa11.55□□□□□ -0.56
CNKSR1-202ENST00000374253 TM2D2Q9BX73 214 aa11.55□□□□□ -0.56
CNKSR1-202ENST00000374253 C16orf95Q9H693 158 aa11.55□□□□□ -0.56
CNKSR1-202ENST00000374253 NSD1Q96L73 2696 aaPredicted RBP11.55□□□□□ -0.56
CNKSR1-202ENST00000374253 ADARB2-AS1A8MUL3 147 aa11.55□□□□□ -0.56
CNKSR1-202ENST00000374253 Q6ZTI0 123 aa11.54□□□□□ -0.56
CNKSR1-202ENST00000374253 VCX2Q9H322 139 aa11.54□□□□□ -0.56
CNKSR1-202ENST00000374253 TRBV7-3A0A075B6L6 115 aa11.53□□□□□ -0.56
CNKSR1-202ENST00000374253 ZNF479Q96JC4 524 aa11.53□□□□□ -0.56
CNKSR1-202ENST00000374253 A0A1W2PPM0 123 aa11.53□□□□□ -0.56
CNKSR1-202ENST00000374253 KRTAP10-3P60369 221 aa11.53□□□□□ -0.56
CNKSR1-202ENST00000374253 SAMD5Q5TGI4 173 aa11.53□□□□□ -0.56
CNKSR1-202ENST00000374253 FAM104AQ969W3 186 aa11.53□□□□□ -0.56
CNKSR1-202ENST00000374253 LY6G6DO95868 133 aa11.52□□□□□ -0.56
CNKSR1-202ENST00000374253 HERVK_113P61574 105 aa11.52□□□□□ -0.56
CNKSR1-202ENST00000374253 HIVEP1P15822 2718 aa11.52□□□□□ -0.57
CNKSR1-202ENST00000374253 GAGE12BA1L429 117 aa11.52□□□□□ -0.57
CNKSR1-202ENST00000374253 LINC01549A6NIU2 74 aa11.52□□□□□ -0.57
CNKSR1-202ENST00000374253 GIG44P09565 113 aaPredicted RBP11.52□□□□□ -0.57
CNKSR1-202ENST00000374253 SPCS1Q9Y6A9 102 aa11.52□□□□□ -0.57
CNKSR1-202ENST00000374253 SPXQ9BT56 116 aa11.51□□□□□ -0.57
CNKSR1-202ENST00000374253 SRSF9Q13242 221 aaKnown RBP eCLIP11.51□□□□□ -0.57
CNKSR1-202ENST00000374253 C12orf74Q32Q52 190 aa11.51□□□□□ -0.57
CNKSR1-202ENST00000374253 BEAN1Q3B7T3 259 aa11.51□□□□□ -0.57
CNKSR1-202ENST00000374253 PAPPA-AS1Q5QFB9 102 aa11.51□□□□□ -0.57
CNKSR1-202ENST00000374253 LINC00467Q9BRT7 94 aa11.51□□□□□ -0.57
CNKSR1-202ENST00000374253 NOP10Q9NPE3 64 aaKnown RBP11.51□□□□□ -0.57
CNKSR1-202ENST00000374253 TRRAPQ9Y4A5 3859 aa11.51□□□□□ -0.57
CNKSR1-202ENST00000374253 ATRQ13535 2644 aa11.51□□□□□ -0.57
CNKSR1-202ENST00000374253 RS1O15537 224 aa11.5□□□□□ -0.57
CNKSR1-202ENST00000374253 CHCHD7Q9BUK0 85 aa11.5□□□□□ -0.57
CNKSR1-202ENST00000374253 K7EP34 96 aa11.5□□□□□ -0.57
CNKSR1-202ENST00000374253 IGLV1-51P01701 117 aa11.5□□□□□ -0.57
CNKSR1-202ENST00000374253 ZNF22P17026 224 aaPredicted RBP11.5□□□□□ -0.57
CNKSR1-202ENST00000374253 J3QQQ9 107 aa11.49□□□□□ -0.57
CNKSR1-202ENST00000374253 RHODO00212 210 aa11.49□□□□□ -0.57
CNKSR1-202ENST00000374253 FABP2P12104 132 aa11.49□□□□□ -0.57
CNKSR1-202ENST00000374253 EDA2RQ9HAV5 297 aa11.49□□□□□ -0.57
CNKSR1-202ENST00000374253 TAL2Q16559 108 aa11.48□□□□□ -0.57
CNKSR1-202ENST00000374253 GTF2H5Q6ZYL4 71 aa11.48□□□□□ -0.57
CNKSR1-202ENST00000374253 INAFM1C9JVW0 142 aa11.48□□□□□ -0.57
CNKSR1-202ENST00000374253 SFTA2Q6UW10 78 aa11.48□□□□□ -0.57
CNKSR1-202ENST00000374253 NFE4Q86UQ8 179 aa11.48□□□□□ -0.57
CNKSR1-202ENST00000374253 SPATA3Q8NHX4 192 aa11.48□□□□□ -0.57
CNKSR1-202ENST00000374253 C19orf73Q9NVV2 129 aa11.48□□□□□ -0.57
CNKSR1-202ENST00000374253 A0A0J9YY99 117 aa11.47□□□□□ -0.57
CNKSR1-202ENST00000374253 LGALS3P17931 250 aaKnown RBP11.47□□□□□ -0.57
CNKSR1-202ENST00000374253 Q6ZUT4 128 aa11.47□□□□□ -0.57
CNKSR1-202ENST00000374253 CLUHP3Q96NS8 147 aa11.47□□□□□ -0.57
CNKSR1-202ENST00000374253 TRAV8-3A0A0A6YYJ7 113 aa11.47□□□□□ -0.57
CNKSR1-202ENST00000374253 TMEM223A0PJW6 202 aa11.47□□□□□ -0.57
CNKSR1-202ENST00000374253 IGLL5B9A064 214 aa11.47□□□□□ -0.57
CNKSR1-202ENST00000374253 COTL1Q14019 142 aa11.47□□□□□ -0.57
CNKSR1-202ENST00000374253 PIK3CD-AS1Q5SR53 167 aa11.47□□□□□ -0.57
CNKSR1-202ENST00000374253 RNF151Q2KHN1 245 aa11.46□□□□□ -0.57
CNKSR1-202ENST00000374253 AMELXQ99217 191 aa11.46□□□□□ -0.57
CNKSR1-202ENST00000374253 UBE2D4Q9Y2X8 147 aa11.46□□□□□ -0.57
CNKSR1-202ENST00000374253 A8MZ25 164 aa11.46□□□□□ -0.58
CNKSR1-202ENST00000374253 GAGE7O76087 117 aa11.46□□□□□ -0.58
CNKSR1-202ENST00000374253 PF4P02776 101 aa11.46□□□□□ -0.58
CNKSR1-202ENST00000374253 GAGE12FP0CL80 117 aa11.46□□□□□ -0.58
CNKSR1-202ENST00000374253 GAGE12GP0CL81 117 aa11.46□□□□□ -0.58
CNKSR1-202ENST00000374253 GAGE12IP0CL82 117 aa11.46□□□□□ -0.58
CNKSR1-202ENST00000374253 IL17DQ8TAD2 202 aa11.46□□□□□ -0.58
CNKSR1-202ENST00000374253 TMEM263Q8WUH6 116 aaKnown RBP11.46□□□□□ -0.58
CNKSR1-202ENST00000374253 CBY1Q9Y3M2 126 aa11.46□□□□□ -0.58
CNKSR1-202ENST00000374253 PTH2Q96A98 100 aa11.45□□□□□ -0.58
CNKSR1-202ENST00000374253 APOMO95445 188 aa11.45□□□□□ -0.58
CNKSR1-202ENST00000374253 C21orf62-AS1Q17RA5 79 aa11.45□□□□□ -0.58
CNKSR1-202ENST00000374253 GAGE12JA6NER3 117 aa11.44□□□□□ -0.58
CNKSR1-202ENST00000374253 GAGE4Q13068 117 aa11.44□□□□□ -0.58
CNKSR1-202ENST00000374253 GAGE5Q13069 117 aa11.44□□□□□ -0.58
CNKSR1-202ENST00000374253 GAGE13Q4V321 117 aa11.44□□□□□ -0.58
CNKSR1-202ENST00000374253 SLC25A29Q8N8R3 303 aa11.44□□□□□ -0.58
CNKSR1-202ENST00000374253 PYGO1Q9Y3Y4 419 aa11.44□□□□□ -0.58
CNKSR1-202ENST00000374253 NDUFA7O95182 113 aa11.43□□□□□ -0.58
CNKSR1-202ENST00000374253 LINC00694P0DN24 101 aa11.43□□□□□ -0.58
CNKSR1-202ENST00000374253 MTURNQ8N3F0 131 aa11.43□□□□□ -0.58
CNKSR1-202ENST00000374253 TRGV2A0A075B6R0 118 aa11.43□□□□□ -0.58
CNKSR1-202ENST00000374253 LOC100131303A0A0U1RQF7 123 aa11.43□□□□□ -0.58
CNKSR1-202ENST00000374253 PLAC8L1A1L4L8 177 aa11.43□□□□□ -0.58
CNKSR1-202ENST00000374253 LEPROTO15243 131 aa11.42□□□□□ -0.58
CNKSR1-202ENST00000374253 SPINK8P0C7L1 97 aa11.42□□□□□ -0.58
CNKSR1-202ENST00000374253 DNAJC30Q96LL9 226 aa11.42□□□□□ -0.58
CNKSR1-202ENST00000374253 PGPEP1Q9NXJ5 209 aa11.42□□□□□ -0.58
CNKSR1-202ENST00000374253 FLNBO75369 2602 aaKnown RBP11.41□□□□□ -0.58
CNKSR1-202ENST00000374253 K7EQD1 137 aa11.41□□□□□ -0.58
CNKSR1-202ENST00000374253 IGHV3-30-3P0DP02 117 aa11.41□□□□□ -0.58
CNKSR1-202ENST00000374253 OCIAD2Q56VL3 154 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms