RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 F8VRH5 84 aa11.16□□□□□ -0.62
HDAC8-209ENST00000373589 EMP1P54849 157 aa11.16□□□□□ -0.62
HDAC8-209ENST00000373589 TRBV7-3A0A075B6L6 115 aa11.15□□□□□ -0.62
HDAC8-209ENST00000373589 PRSS29PA6NIE9 313 aa11.15□□□□□ -0.62
HDAC8-209ENST00000373589 TRBV6-4A0A1B0GX49 114 aa11.15□□□□□ -0.63
HDAC8-209ENST00000373589 PLNP26678 52 aa11.15□□□□□ -0.63
HDAC8-209ENST00000373589 ZNRF2Q8NHG8 242 aa11.15□□□□□ -0.63
HDAC8-209ENST00000373589 CHCHD7Q9BUK0 85 aa11.15□□□□□ -0.63
HDAC8-209ENST00000373589 CHTOPQ9Y3Y2 248 aaKnown RBP11.15□□□□□ -0.63
HDAC8-209ENST00000373589 RPL36AP83881 106 aaKnown RBP11.14□□□□□ -0.63
HDAC8-209ENST00000373589 RPL36ALQ969Q0 106 aaKnown RBP11.14□□□□□ -0.63
HDAC8-209ENST00000373589 IGHV3-38A0A0C4DH36 116 aa11.13□□□□□ -0.63
HDAC8-209ENST00000373589 COX8AP10176 69 aa11.13□□□□□ -0.63
HDAC8-209ENST00000373589 COTL1Q14019 142 aa11.13□□□□□ -0.63
HDAC8-209ENST00000373589 FHL2Q14192 279 aa11.13□□□□□ -0.63
HDAC8-209ENST00000373589 PMVKQ15126 192 aa11.13□□□□□ -0.63
HDAC8-209ENST00000373589 SLC25A34Q6PIV7 304 aa11.13□□□□□ -0.63
HDAC8-209ENST00000373589 OR11H2Q8NH07 326 aa11.13□□□□□ -0.63
HDAC8-209ENST00000373589 PHLDA1Q8WV24 401 aaPredicted RBP11.13□□□□□ -0.63
HDAC8-209ENST00000373589 PYGO1Q9Y3Y4 419 aa11.13□□□□□ -0.63
HDAC8-209ENST00000373589 HNRNPA3P51991 378 aaKnown RBP11.12□□□□□ -0.63
HDAC8-209ENST00000373589 UBE2D3P61077 147 aa11.12□□□□□ -0.63
HDAC8-209ENST00000373589 UBE2D2P62837 147 aa11.12□□□□□ -0.63
HDAC8-209ENST00000373589 MRPL52Q86TS9 123 aaKnown RBP11.12□□□□□ -0.63
HDAC8-209ENST00000373589 RNF183Q96D59 192 aa11.12□□□□□ -0.63
HDAC8-209ENST00000373589 CST9LQ9H4G1 147 aa11.12□□□□□ -0.63
HDAC8-209ENST00000373589 TP73-AS1Q9UF72 201 aa11.12□□□□□ -0.63
HDAC8-209ENST00000373589 A8MZ25 164 aa11.12□□□□□ -0.63
HDAC8-209ENST00000373589 DEFB130BP0DP73 79 aa11.12□□□□□ -0.63
HDAC8-209ENST00000373589 DEFB130AP0DP74 79 aa11.12□□□□□ -0.63
HDAC8-209ENST00000373589 CTAG1AP78358 180 aa11.12□□□□□ -0.63
HDAC8-209ENST00000373589 ZC2HC1BQ5TFG8 222 aa11.12□□□□□ -0.63
HDAC8-209ENST00000373589 DAZ4Q86SG3 579 aaKnown RBP11.12□□□□□ -0.63
HDAC8-209ENST00000373589 DAZ3Q9NR90 486 aaKnown RBP11.12□□□□□ -0.63
HDAC8-209ENST00000373589 MRPS16Q9Y3D3 137 aaKnown RBP11.12□□□□□ -0.63
HDAC8-209ENST00000373589 TRGV4A0A0C4DH28 118 aa11.11□□□□□ -0.63
HDAC8-209ENST00000373589 LYRM9A8MSI8 78 aa11.11□□□□□ -0.63
HDAC8-209ENST00000373589 FGF6P10767 208 aa11.11□□□□□ -0.63
HDAC8-209ENST00000373589 SNHG12Q9BXW3 62 aa11.11□□□□□ -0.63
HDAC8-209ENST00000373589 ZMAT5Q9UDW3 170 aaKnown RBP11.11□□□□□ -0.63
HDAC8-209ENST00000373589 IGLV4-3A0A075B6K6 122 aa11.1□□□□□ -0.63
HDAC8-209ENST00000373589 IGHV4-28A0A0C4DH34 117 aa11.1□□□□□ -0.63
HDAC8-209ENST00000373589 GAGE12JA6NER3 117 aa11.1□□□□□ -0.63
HDAC8-209ENST00000373589 MIFP14174 115 aa11.1□□□□□ -0.63
HDAC8-209ENST00000373589 GAGE1Q13065 139 aa11.1□□□□□ -0.63
HDAC8-209ENST00000373589 GAGE4Q13068 117 aa11.1□□□□□ -0.63
HDAC8-209ENST00000373589 GAGE5Q13069 117 aa11.1□□□□□ -0.63
HDAC8-209ENST00000373589 GAGE13Q4V321 117 aa11.1□□□□□ -0.63
HDAC8-209ENST00000373589 Q8NAQ8 132 aa11.1□□□□□ -0.63
HDAC8-209ENST00000373589 FAM104AQ969W3 186 aa11.1□□□□□ -0.63
HDAC8-209ENST00000373589 OPRPNQ99935 248 aaPredicted RBP11.1□□□□□ -0.63
HDAC8-209ENST00000373589 IGLV4-69A0A075B6H9 119 aa11.09□□□□□ -0.63
HDAC8-209ENST00000373589 M0R143 59 aa11.09□□□□□ -0.63
HDAC8-209ENST00000373589 EREGO14944 169 aa11.09□□□□□ -0.63
HDAC8-209ENST00000373589 NPSP0C0P6 89 aa11.09□□□□□ -0.63
HDAC8-209ENST00000373589 FAM222AQ5U5X8 452 aa11.09□□□□□ -0.63
HDAC8-209ENST00000373589 IGKV2D-26A0A0A0MRZ7 120 aa11.09□□□□□ -0.63
HDAC8-209ENST00000373589 TCTAP57738 103 aa11.09□□□□□ -0.63
HDAC8-209ENST00000373589 BOD1L2Q8IYS8 172 aa11.09□□□□□ -0.63
HDAC8-209ENST00000373589 UBE2D4Q9Y2X8 147 aa11.09□□□□□ -0.63
HDAC8-209ENST00000373589 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.08□□□□□ -0.64
HDAC8-209ENST00000373589 LOC100131303A0A0U1RQF7 123 aa11.08□□□□□ -0.64
HDAC8-209ENST00000373589 IGKV2-29A2NJV5 120 aaPredicted RBP11.08□□□□□ -0.64
HDAC8-209ENST00000373589 CRYBA4P53673 196 aa11.08□□□□□ -0.64
HDAC8-209ENST00000373589 SPANXA1Q9NS26 97 aa11.08□□□□□ -0.64
HDAC8-209ENST00000373589 G3V4G9 280 aa11.07□□□□□ -0.64
HDAC8-209ENST00000373589 DLEU1O43261 78 aa11.07□□□□□ -0.64
HDAC8-209ENST00000373589 LINC00694P0DN24 101 aa11.07□□□□□ -0.64
HDAC8-209ENST00000373589 NMUP48645 174 aa11.07□□□□□ -0.64
HDAC8-209ENST00000373589 PAPPA-AS1Q5QFB9 102 aa11.07□□□□□ -0.64
HDAC8-209ENST00000373589 NTM-AS1Q6ZSK4 140 aa11.07□□□□□ -0.64
HDAC8-209ENST00000373589 AMELXQ99217 191 aa11.07□□□□□ -0.64
HDAC8-209ENST00000373589 PRADC1Q9BSG0 188 aa11.07□□□□□ -0.64
HDAC8-209ENST00000373589 C11orf86A6NJI1 115 aa11.06□□□□□ -0.64
HDAC8-209ENST00000373589 DEFB4AO15263 64 aa11.06□□□□□ -0.64
HDAC8-209ENST00000373589 LBHQ53QV2 105 aaPredicted RBP11.06□□□□□ -0.64
HDAC8-209ENST00000373589 CEMP1Q6PRD7 247 aaPredicted RBP11.06□□□□□ -0.64
HDAC8-209ENST00000373589 PCP2Q8IVA1 136 aa11.06□□□□□ -0.64
HDAC8-209ENST00000373589 GTSF1LQ9H1H1 148 aa11.06□□□□□ -0.64
HDAC8-209ENST00000373589 SAMD5Q5TGI4 173 aa11.06□□□□□ -0.64
HDAC8-209ENST00000373589 C2orf91Q6ZV80 131 aa11.06□□□□□ -0.64
HDAC8-209ENST00000373589 VCX2Q9H322 139 aa11.06□□□□□ -0.64
HDAC8-209ENST00000373589 NFE4Q86UQ8 179 aa11.05□□□□□ -0.64
HDAC8-209ENST00000373589 C2orf88Q9BSF0 95 aa11.05□□□□□ -0.64
HDAC8-209ENST00000373589 TIMM21Q9BVV7 248 aa11.05□□□□□ -0.64
HDAC8-209ENST00000373589 SBSPONQ8IVN8 264 aa11.04□□□□□ -0.64
HDAC8-209ENST00000373589 CELA1Q9UNI1 258 aa11.04□□□□□ -0.64
HDAC8-209ENST00000373589 MRPS36P82909 103 aaKnown RBP11.03□□□□□ -0.64
HDAC8-209ENST00000373589 PRO0255Q9UI72 69 aa11.03□□□□□ -0.64
HDAC8-209ENST00000373589 E9PLD3 99 aa11.02□□□□□ -0.65
HDAC8-209ENST00000373589 SIVA1O15304 175 aa11.02□□□□□ -0.65
HDAC8-209ENST00000373589 TTTY13Q9BZ97 58 aa11.02□□□□□ -0.65
HDAC8-209ENST00000373589 SPART-AS1P0CW21 52 aa11.01□□□□□ -0.65
HDAC8-209ENST00000373589 DAD1P61803 113 aa11.01□□□□□ -0.65
HDAC8-209ENST00000373589 Q6ZUT4 128 aa11.01□□□□□ -0.65
HDAC8-209ENST00000373589 CSDC2Q9Y534 153 aaKnown RBP11.01□□□□□ -0.65
HDAC8-209ENST00000373589 CHAC1Q9BUX1 264 aa11.01□□□□□ -0.65
HDAC8-209ENST00000373589 A0A0J9YXV3 536 aa11□□□□□ -0.65
HDAC8-209ENST00000373589 GYPEP15421 78 aa11□□□□□ -0.65
HDAC8-209ENST00000373589 RNASE13Q5GAN3 156 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms