RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 E9PLD3 99 aa13.14□□□□□ -0.31
TRAF3IP1-201ENST00000373327 IGLV1-40P01703 118 aa13.14□□□□□ -0.31
TRAF3IP1-201ENST00000373327 WFDC10AQ9H1F0 79 aa13.14□□□□□ -0.31
TRAF3IP1-201ENST00000373327 MUSTN1Q8IVN3 82 aa13.13□□□□□ -0.31
TRAF3IP1-201ENST00000373327 TEX29Q8N6K0 151 aa13.13□□□□□ -0.31
TRAF3IP1-201ENST00000373327 BBC3Q96PG8 261 aaPredicted RBP13.13□□□□□ -0.31
TRAF3IP1-201ENST00000373327 TRBV7-9A0A0J9YWB2 115 aa13.13□□□□□ -0.31
TRAF3IP1-201ENST00000373327 PFN2P35080 140 aa13.13□□□□□ -0.31
TRAF3IP1-201ENST00000373327 TRAV12-1A0A0B4J245 112 aa13.12□□□□□ -0.31
TRAF3IP1-201ENST00000373327 HRNRQ86YZ3 2850 aaPredicted RBP13.12□□□□□ -0.31
TRAF3IP1-201ENST00000373327 DEFB4AO15263 64 aa13.12□□□□□ -0.31
TRAF3IP1-201ENST00000373327 MAP6D1Q9H9H5 199 aa13.12□□□□□ -0.31
TRAF3IP1-201ENST00000373327 C20orf203Q8NBC4 194 aa13.12□□□□□ -0.31
TRAF3IP1-201ENST00000373327 HIGD1BQ9P298 99 aa13.12□□□□□ -0.31
TRAF3IP1-201ENST00000373327 RHODO00212 210 aa13.11□□□□□ -0.31
TRAF3IP1-201ENST00000373327 H3BMM0 161 aa13.11□□□□□ -0.31
TRAF3IP1-201ENST00000373327 Q6YL49 198 aa13.11□□□□□ -0.31
TRAF3IP1-201ENST00000373327 SVEP1Q4LDE5 3571 aa13.11□□□□□ -0.31
TRAF3IP1-201ENST00000373327 ATRQ13535 2644 aa13.1□□□□□ -0.31
TRAF3IP1-201ENST00000373327 ZNF702PQ9H963 129 aa13.1□□□□□ -0.31
TRAF3IP1-201ENST00000373327 M0QY20 66 aa13.1□□□□□ -0.31
TRAF3IP1-201ENST00000373327 DNAJC9-AS1A6NH13 148 aa13.1□□□□□ -0.31
TRAF3IP1-201ENST00000373327 TAL2Q16559 108 aa13.1□□□□□ -0.31
TRAF3IP1-201ENST00000373327 ZNF843Q8N446 348 aa13.1□□□□□ -0.31
TRAF3IP1-201ENST00000373327 RBX1P62877 108 aa13.09□□□□□ -0.31
TRAF3IP1-201ENST00000373327 KLLNB2CW77 178 aa13.09□□□□□ -0.31
TRAF3IP1-201ENST00000373327 Q6ZTI0 123 aa13.09□□□□□ -0.31
TRAF3IP1-201ENST00000373327 Q6ZUT4 128 aa13.09□□□□□ -0.31
TRAF3IP1-201ENST00000373327 RHOHQ15669 191 aa13.09□□□□□ -0.31
TRAF3IP1-201ENST00000373327 C2orf82Q6UX34 121 aa13.08□□□□□ -0.31
TRAF3IP1-201ENST00000373327 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.08□□□□□ -0.32
TRAF3IP1-201ENST00000373327 Q9H8V8 135 aa13.08□□□□□ -0.32
TRAF3IP1-201ENST00000373327 F8W1H4 67 aa13.08□□□□□ -0.32
TRAF3IP1-201ENST00000373327 A0A0J9YY99 117 aa13.07□□□□□ -0.32
TRAF3IP1-201ENST00000373327 PAX4O43316 350 aa13.07□□□□□ -0.32
TRAF3IP1-201ENST00000373327 DNAL4O96015 105 aa13.07□□□□□ -0.32
TRAF3IP1-201ENST00000373327 CRYGDP07320 174 aa13.07□□□□□ -0.32
TRAF3IP1-201ENST00000373327 ZNF580Q9UK33 172 aa13.07□□□□□ -0.32
TRAF3IP1-201ENST00000373327 SOCS3O14543 225 aa13.06□□□□□ -0.32
TRAF3IP1-201ENST00000373327 MED14OSP0DP75 135 aa13.06□□□□□ -0.32
TRAF3IP1-201ENST00000373327 Q6ZSV7 163 aa13.06□□□□□ -0.32
TRAF3IP1-201ENST00000373327 IGLV2-18A0A075B6J9 118 aa13.06□□□□□ -0.32
TRAF3IP1-201ENST00000373327 GAGE12HA6NDE8 117 aa13.06□□□□□ -0.32
TRAF3IP1-201ENST00000373327 TIMM17AQ99595 171 aa13.06□□□□□ -0.32
TRAF3IP1-201ENST00000373327 SNCGO76070 127 aa13.06□□□□□ -0.32
TRAF3IP1-201ENST00000373327 C5orf38Q86SI9 138 aa13.05□□□□□ -0.32
TRAF3IP1-201ENST00000373327 NXPH4O95158 308 aa13.05□□□□□ -0.32
TRAF3IP1-201ENST00000373327 IGHV3-30-3P0DP02 117 aa13.05□□□□□ -0.32
TRAF3IP1-201ENST00000373327 CFC1BP0CG36 223 aa13.05□□□□□ -0.32
TRAF3IP1-201ENST00000373327 CFC1P0CG37 223 aa13.05□□□□□ -0.32
TRAF3IP1-201ENST00000373327 COX8CQ7Z4L0 72 aa13.05□□□□□ -0.32
TRAF3IP1-201ENST00000373327 LINC00467Q9BRT7 94 aa13.05□□□□□ -0.32
TRAF3IP1-201ENST00000373327 C6orf226Q5I0X4 101 aa13.04□□□□□ -0.32
TRAF3IP1-201ENST00000373327 DEFB114Q30KQ6 69 aa13.04□□□□□ -0.32
TRAF3IP1-201ENST00000373327 MORN3Q6PF18 240 aaPredicted RBP13.04□□□□□ -0.32
TRAF3IP1-201ENST00000373327 PSMG3-AS1Q96PY0 264 aa13.04□□□□□ -0.32
TRAF3IP1-201ENST00000373327 POLR2KP53803 58 aaKnown RBP13.04□□□□□ -0.32
TRAF3IP1-201ENST00000373327 NTN5Q8WTR8 489 aaPredicted RBP13.04□□□□□ -0.32
TRAF3IP1-201ENST00000373327 LEPROTO15243 131 aa13.03□□□□□ -0.32
TRAF3IP1-201ENST00000373327 TMEM243Q9BU79 118 aa13.03□□□□□ -0.32
TRAF3IP1-201ENST00000373327 SLC25A20O43772 301 aa13.03□□□□□ -0.32
TRAF3IP1-201ENST00000373327 IGLV4-3A0A075B6K6 122 aa13.03□□□□□ -0.32
TRAF3IP1-201ENST00000373327 IGHV4-4A0A075B6R2 117 aa13.03□□□□□ -0.32
TRAF3IP1-201ENST00000373327 TTC32Q5I0X7 151 aa13.03□□□□□ -0.32
TRAF3IP1-201ENST00000373327 TM2D2Q9BX73 214 aa13.03□□□□□ -0.32
TRAF3IP1-201ENST00000373327 TSPAN13O95857 204 aa13.02□□□□□ -0.32
TRAF3IP1-201ENST00000373327 NBEAL2Q6ZNJ1 2754 aa13.02□□□□□ -0.32
TRAF3IP1-201ENST00000373327 Q9UF83 564 aa13.02□□□□□ -0.33
TRAF3IP1-201ENST00000373327 J3QKU1 62 aa13.01□□□□□ -0.33
TRAF3IP1-201ENST00000373327 ZNF22P17026 224 aaPredicted RBP13.01□□□□□ -0.33
TRAF3IP1-201ENST00000373327 ATXN8Q156A1 80 aa13.01□□□□□ -0.33
TRAF3IP1-201ENST00000373327 SMR3AQ99954 134 aa13.01□□□□□ -0.33
TRAF3IP1-201ENST00000373327 MALP21145 153 aa13.01□□□□□ -0.33
TRAF3IP1-201ENST00000373327 C10orf126Q8N4M7 172 aa13.01□□□□□ -0.33
TRAF3IP1-201ENST00000373327 CDKN2A-AS1Q9UH64 79 aa13.01□□□□□ -0.33
TRAF3IP1-201ENST00000373327 XCL1P47992 114 aa13.01□□□□□ -0.33
TRAF3IP1-201ENST00000373327 C4orf3Q8WVX3 66 aa13.01□□□□□ -0.33
TRAF3IP1-201ENST00000373327 TEP1Q99973 2627 aaKnown RBP13.01□□□□□ -0.33
TRAF3IP1-201ENST00000373327 GCN1Q92616 2671 aaKnown RBP13□□□□□ -0.33
TRAF3IP1-201ENST00000373327 INSL3P51460 131 aa13□□□□□ -0.33
TRAF3IP1-201ENST00000373327 C1QTNF4Q9BXJ3 329 aa13□□□□□ -0.33
TRAF3IP1-201ENST00000373327 IGLV10-54A0A075B6I4 117 aa13□□□□□ -0.33
TRAF3IP1-201ENST00000373327 TSHBP01222 138 aa13□□□□□ -0.33
TRAF3IP1-201ENST00000373327 NDUFA11Q86Y39 141 aa13□□□□□ -0.33
TRAF3IP1-201ENST00000373327 CELSR1Q9NYQ6 3014 aa13□□□□□ -0.33
TRAF3IP1-201ENST00000373327 LGALS9O00182 355 aa13□□□□□ -0.33
TRAF3IP1-201ENST00000373327 NDUFA7O95182 113 aa13□□□□□ -0.33
TRAF3IP1-201ENST00000373327 TRBV27A0A0K0K1C4 114 aa12.99□□□□□ -0.33
TRAF3IP1-201ENST00000373327 TSPEAR-AS2P59090 65 aa12.99□□□□□ -0.33
TRAF3IP1-201ENST00000373327 TRAV8-4A0A0B4J246 113 aa12.98□□□□□ -0.33
TRAF3IP1-201ENST00000373327 CLEC2BQ92478 149 aa12.98□□□□□ -0.33
TRAF3IP1-201ENST00000373327 F8P00451 2351 aa12.98□□□□□ -0.33
TRAF3IP1-201ENST00000373327 TRBV7-3A0A075B6L6 115 aa12.98□□□□□ -0.33
TRAF3IP1-201ENST00000373327 TCL1BO95988 128 aa12.98□□□□□ -0.33
TRAF3IP1-201ENST00000373327 CRIP2P52943 208 aaPredicted RBP12.98□□□□□ -0.33
TRAF3IP1-201ENST00000373327 CFAP126Q5VTH2 177 aa12.98□□□□□ -0.33
TRAF3IP1-201ENST00000373327 F5H768 121 aa12.97□□□□□ -0.33
TRAF3IP1-201ENST00000373327 G3V4G9 280 aa12.97□□□□□ -0.33
TRAF3IP1-201ENST00000373327 NF1P21359 2839 aa12.97□□□□□ -0.33
TRAF3IP1-201ENST00000373327 CFAP161Q6P656 301 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms