RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 A0A087WW49 117 aa7.1□□□□□ -1.27
SF3A3-201ENST00000373019 J3QLI3 93 aa7.1□□□□□ -1.27
SF3A3-201ENST00000373019 BUB3O43684 328 aa7.1□□□□□ -1.27
SF3A3-201ENST00000373019 NPC2P61916 151 aa7.1□□□□□ -1.27
SF3A3-201ENST00000373019 NACAE9PAV3 2078 aa7.1□□□□□ -1.27
SF3A3-201ENST00000373019 TRAV13-1A0A0B4J241 112 aa7.1□□□□□ -1.27
SF3A3-201ENST00000373019 BUB1B-PAK6H3BSN5 160 aa7.1□□□□□ -1.27
SF3A3-201ENST00000373019 IGHV3-30-3P0DP02 117 aa7.1□□□□□ -1.27
SF3A3-201ENST00000373019 BEAN1Q3B7T3 259 aa7.1□□□□□ -1.27
SF3A3-201ENST00000373019 LINC00336Q6ZUF6 198 aa7.1□□□□□ -1.27
SF3A3-201ENST00000373019 CLPSL1A2RUU4 121 aa7.09□□□□□ -1.27
SF3A3-201ENST00000373019 TIRAPP58753 221 aa7.09□□□□□ -1.27
SF3A3-201ENST00000373019 MALP21145 153 aa7.09□□□□□ -1.27
SF3A3-201ENST00000373019 SERP2Q8N6R1 65 aa7.09□□□□□ -1.27
SF3A3-201ENST00000373019 IGHV3-66A0A0C4DH42 116 aa7.09□□□□□ -1.27
SF3A3-201ENST00000373019 PPP1R17O96001 155 aa7.09□□□□□ -1.27
SF3A3-201ENST00000373019 C22orf34Q6ZV56 151 aa7.09□□□□□ -1.27
SF3A3-201ENST00000373019 C10orf105Q8TEF2 133 aa7.09□□□□□ -1.27
SF3A3-201ENST00000373019 PRO0628Q9UI54 55 aa7.09□□□□□ -1.27
SF3A3-201ENST00000373019 ZFHX3Q15911 3703 aa7.09□□□□□ -1.28
SF3A3-201ENST00000373019 WNK2Q9Y3S1 2297 aa7.09□□□□□ -1.28
SF3A3-201ENST00000373019 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.09□□□□□ -1.289e-7■■■□□ 17.2
SF3A3-201ENST00000373019 A0A0J9YXV3 536 aa7.08□□□□□ -1.28
SF3A3-201ENST00000373019 LY6LH3BQJ8 138 aa7.08□□□□□ -1.28
SF3A3-201ENST00000373019 PHLDA3Q9Y5J5 127 aa7.08□□□□□ -1.28
SF3A3-201ENST00000373019 CRYBG3Q68DQ2 2970 aa7.08□□□□□ -1.28
SF3A3-201ENST00000373019 NDUFB3O43676 98 aa7.08□□□□□ -1.28
SF3A3-201ENST00000373019 MIAQ16674 131 aa7.08□□□□□ -1.28
SF3A3-201ENST00000373019 IGHV1-69P01742 117 aa7.08□□□□□ -1.28
SF3A3-201ENST00000373019 RNASE3P12724 160 aaKnown RBP7.08□□□□□ -1.28
SF3A3-201ENST00000373019 PLA2G2AP14555 144 aa7.07□□□□□ -1.28
SF3A3-201ENST00000373019 PKIGQ9Y2B9 76 aa7.07□□□□□ -1.28
SF3A3-201ENST00000373019 TRAV12-3A0A0B4J271 114 aa7.07□□□□□ -1.28
SF3A3-201ENST00000373019 TRBV27A0A0K0K1C4 114 aa7.07□□□□□ -1.28
SF3A3-201ENST00000373019 VCYO14598 125 aa7.07□□□□□ -1.28
SF3A3-201ENST00000373019 FHL2Q14192 279 aa7.07□□□□□ -1.28
SF3A3-201ENST00000373019 IGHV3OR16-13A0A075B7E8 117 aa7.07□□□□□ -1.28
SF3A3-201ENST00000373019 IGHV3-74A0A0B4J1X5 117 aa7.07□□□□□ -1.28
SF3A3-201ENST00000373019 RS1O15537 224 aa7.07□□□□□ -1.28
SF3A3-201ENST00000373019 GNRH2O43555 120 aa7.07□□□□□ -1.28
SF3A3-201ENST00000373019 LINC01561Q8N1V8 128 aa7.07□□□□□ -1.28
SF3A3-201ENST00000373019 DAND5Q8N907 189 aa7.07□□□□□ -1.28
SF3A3-201ENST00000373019 A0A087WVE0 104 aa7.06□□□□□ -1.28
SF3A3-201ENST00000373019 TMEM178BH3BS89 294 aa7.06□□□□□ -1.28
SF3A3-201ENST00000373019 SUMO4Q6EEV6 95 aa7.06□□□□□ -1.28
SF3A3-201ENST00000373019 VMO1Q7Z5L0 202 aa7.06□□□□□ -1.28
SF3A3-201ENST00000373019 ZFAND2AQ8N6M9 145 aa7.06□□□□□ -1.28
SF3A3-201ENST00000373019 RNF5Q99942 180 aa7.06□□□□□ -1.28
SF3A3-201ENST00000373019 SETD2Q9BYW2 2564 aaPredicted RBP7.06□□□□□ -1.28
SF3A3-201ENST00000373019 A8MZ25 164 aa7.06□□□□□ -1.28
SF3A3-201ENST00000373019 M0R1W7 72 aa7.06□□□□□ -1.28
SF3A3-201ENST00000373019 S100A4P26447 101 aaKnown RBP7.06□□□□□ -1.28
SF3A3-201ENST00000373019 NDPQ00604 133 aa7.06□□□□□ -1.28
SF3A3-201ENST00000373019 FAM104AQ969W3 186 aa7.06□□□□□ -1.28
SF3A3-201ENST00000373019 C1orf43Q9BWL3 253 aa7.06□□□□□ -1.28
SF3A3-201ENST00000373019 PFN2P35080 140 aa7.05□□□□□ -1.28
SF3A3-201ENST00000373019 DCHS2Q6V1P9 2916 aa7.05□□□□□ -1.28
SF3A3-201ENST00000373019 EPM2AB3EWF7 344 aa7.05□□□□□ -1.28
SF3A3-201ENST00000373019 TINCRA0A1B0GVN0 87 aa7.05□□□□□ -1.28
SF3A3-201ENST00000373019 COX7A2LO14548 114 aa7.05□□□□□ -1.28
SF3A3-201ENST00000373019 NBR2O15453 112 aa7.05□□□□□ -1.28
SF3A3-201ENST00000373019 CCL17Q92583 94 aa7.05□□□□□ -1.28
SF3A3-201ENST00000373019 DYNLRB1Q9NP97 96 aa7.05□□□□□ -1.28
SF3A3-201ENST00000373019 NXPH4O95158 308 aa7.04□□□□□ -1.28
SF3A3-201ENST00000373019 BAALC-AS2P0C853 105 aa7.04□□□□□ -1.28
SF3A3-201ENST00000373019 RPL35AP18077 110 aaKnown RBP7.04□□□□□ -1.28
SF3A3-201ENST00000373019 SEC61GP60059 68 aa7.04□□□□□ -1.28
SF3A3-201ENST00000373019 SEM1Q6ZVN7 128 aa7.04□□□□□ -1.28
SF3A3-201ENST00000373019 Q8N2B8 174 aa7.04□□□□□ -1.28
SF3A3-201ENST00000373019 MRPL53Q96EL3 112 aaKnown RBP7.04□□□□□ -1.28
SF3A3-201ENST00000373019 C20orf173Q96LM9 149 aa7.04□□□□□ -1.28
SF3A3-201ENST00000373019 NDUFA12Q9UI09 145 aa7.04□□□□□ -1.28
SF3A3-201ENST00000373019 ITPR2Q14571 2701 aa7.04□□□□□ -1.28
SF3A3-201ENST00000373019 IGLV4-3A0A075B6K6 122 aa7.04□□□□□ -1.28
SF3A3-201ENST00000373019 KMT2BQ9UMN6 2715 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-201ENST00000373019 MED14OSP0DP75 135 aa7.03□□□□□ -1.28
SF3A3-201ENST00000373019 NPBQ8NG41 125 aa7.03□□□□□ -1.28
SF3A3-201ENST00000373019 FAM218AQ96MZ4 157 aa7.03□□□□□ -1.28
SF3A3-201ENST00000373019 IGHV3-49A0A0A0MS15 119 aa7.03□□□□□ -1.28
SF3A3-201ENST00000373019 IGKV3D-7A0A0C4DH55 119 aa7.03□□□□□ -1.28
SF3A3-201ENST00000373019 USP17L23D6RBM5 183 aa7.03□□□□□ -1.28
SF3A3-201ENST00000373019 COX7A1P24310 79 aa7.03□□□□□ -1.28
SF3A3-201ENST00000373019 A0A087WWL8 130 aa7.03□□□□□ -1.28
SF3A3-201ENST00000373019 TRAV21A0A0B4J279 112 aa7.03□□□□□ -1.28
SF3A3-201ENST00000373019 IGHV1-58A0A0C4DH39 117 aa7.03□□□□□ -1.28
SF3A3-201ENST00000373019 DEFB1P60022 68 aa7.03□□□□□ -1.28
SF3A3-201ENST00000373019 C9orf129Q5T035 196 aaKnown RBP7.03□□□□□ -1.28
SF3A3-201ENST00000373019 C9orf139Q6ZV77 190 aa7.03□□□□□ -1.28
SF3A3-201ENST00000373019 KAAG1Q9UBP8 84 aa7.03□□□□□ -1.28
SF3A3-201ENST00000373019 TMEM86BQ8N661 226 aa7.02□□□□□ -1.29
SF3A3-201ENST00000373019 MBD3L2Q8NHZ7 208 aaPredicted RBP7.02□□□□□ -1.29
SF3A3-201ENST00000373019 LINC01560Q8TB33 94 aa7.02□□□□□ -1.29
SF3A3-201ENST00000373019 LENEPQ9Y5L5 61 aa7.02□□□□□ -1.29
SF3A3-201ENST00000373019 F8P00451 2351 aa7.02□□□□□ -1.29
SF3A3-201ENST00000373019 TRBV6-5A0A0K0K1A5 114 aa7.02□□□□□ -1.29
SF3A3-201ENST00000373019 AVPP01185 164 aa7.02□□□□□ -1.29
SF3A3-201ENST00000373019 GRNP28799 593 aaKnown RBP7.02□□□□□ -1.29
SF3A3-201ENST00000373019 FAM223AQ8IWN6 122 aa7.02□□□□□ -1.29
SF3A3-201ENST00000373019 C16orf95Q9H693 158 aa7.02□□□□□ -1.29
SF3A3-201ENST00000373019 FAM223BA6NKX1 122 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms