RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 C3orf22Q8N5N4 141 aa8.65□□□□□ -1.02
VCL-202ENST00000372755 LINC00308Q8TCZ7 52 aa8.65□□□□□ -1.02
VCL-202ENST00000372755 IGLV4-3A0A075B6K6 122 aa8.65□□□□□ -1.02
VCL-202ENST00000372755 TRBV6-4A0A1B0GX49 114 aa8.65□□□□□ -1.02
VCL-202ENST00000372755 A0A1W2PNU3 283 aaPredicted RBP8.65□□□□□ -1.02
VCL-202ENST00000372755 LINC01548A6NM66 108 aa8.65□□□□□ -1.02
VCL-202ENST00000372755 SDIM1Q6ZPB5 146 aa8.65□□□□□ -1.02
VCL-202ENST00000372755 FAM19A5Q7Z5A7 132 aaPredicted RBP8.65□□□□□ -1.02
VCL-202ENST00000372755 WNK2Q9Y3S1 2297 aa8.65□□□□□ -1.02
VCL-202ENST00000372755 FSTL3O95633 263 aa8.65□□□□□ -1.02
VCL-202ENST00000372755 SHISA2Q6UWI4 295 aa8.65□□□□□ -1.03
VCL-202ENST00000372755 PLXND1Q9Y4D7 1925 aa8.65□□□□□ -1.03
VCL-202ENST00000372755 TRBV6-8A0A0A6YYG3 113 aa8.64□□□□□ -1.03
VCL-202ENST00000372755 FRMPD3Q5JV73 1810 aa8.64□□□□□ -1.03
VCL-202ENST00000372755 CFAP126Q5VTH2 177 aa8.64□□□□□ -1.03
VCL-202ENST00000372755 TNRC6BQ9UPQ9 1833 aaKnown RBP8.64□□□□□ -1.03
VCL-202ENST00000372755 SYCNQ0VAF6 134 aa8.64□□□□□ -1.03
VCL-202ENST00000372755 ZNF706Q9Y5V0 76 aaPredicted RBP8.64□□□□□ -1.03
VCL-202ENST00000372755 NDUFV3P56181 108 aaKnown RBP8.64□□□□□ -1.03
VCL-202ENST00000372755 LINC00322Q6ZN03 302 aaPredicted RBP8.64□□□□□ -1.03
VCL-202ENST00000372755 ENHOQ6UWT2 76 aa8.64□□□□□ -1.03
VCL-202ENST00000372755 C20orf173Q96LM9 149 aa8.63□□□□□ -1.03
VCL-202ENST00000372755 PRORYQ9H606 182 aa8.63□□□□□ -1.03
VCL-202ENST00000372755 TEX49A0A1B0GTD5 131 aa8.63□□□□□ -1.03
VCL-202ENST00000372755 NUP210Q8TEM1 1887 aaPredicted RBP8.63□□□□□ -1.03
VCL-202ENST00000372755 MLST8Q9BVC4 326 aa8.63□□□□□ -1.03
VCL-202ENST00000372755 SPTAN1Q13813 2472 aaKnown RBP8.63□□□□□ -1.03
VCL-202ENST00000372755 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.63□□□□□ -1.03
VCL-202ENST00000372755 TRAV10A0A0B4J240 114 aa8.62□□□□□ -1.03
VCL-202ENST00000372755 SCXQ7RTU7 201 aa8.62□□□□□ -1.03
VCL-202ENST00000372755 WFDC10BQ8IUB3 73 aa8.62□□□□□ -1.03
VCL-202ENST00000372755 V9GYY9 64 aa8.62□□□□□ -1.03
VCL-202ENST00000372755 NDUFC2-KCTD14E9PQ53 114 aa8.62□□□□□ -1.03
VCL-202ENST00000372755 SLPIP03973 132 aa8.62□□□□□ -1.03
VCL-202ENST00000372755 MPLKIPQ8TAP9 179 aa8.62□□□□□ -1.03
VCL-202ENST00000372755 TRBV30A0A0K0K1B3 111 aa8.62□□□□□ -1.03
VCL-202ENST00000372755 FAM240AA0A1B0GVK7 77 aa8.62□□□□□ -1.03
VCL-202ENST00000372755 GDF5OSQ5U4N7 250 aa8.61□□□□□ -1.03
VCL-202ENST00000372755 M0QY20 66 aa8.61□□□□□ -1.03
VCL-202ENST00000372755 DHRS4-AS1Q9P1J3 65 aa8.61□□□□□ -1.03
VCL-202ENST00000372755 CCKP06307 115 aa8.61□□□□□ -1.03
VCL-202ENST00000372755 ATP5EP56381 51 aaPredicted RBP8.61□□□□□ -1.03
VCL-202ENST00000372755 EBI3Q14213 229 aa8.61□□□□□ -1.03
VCL-202ENST00000372755 NACAE9PAV3 2078 aa8.6□□□□□ -1.03
VCL-202ENST00000372755 C19orf84I3L1E1 186 aa8.6□□□□□ -1.03
VCL-202ENST00000372755 XAGE1AQ9HD64 81 aa8.6□□□□□ -1.03
VCL-202ENST00000372755 UBE2D1P51668 147 aa8.6□□□□□ -1.03
VCL-202ENST00000372755 PIK3CD-AS1Q5SR53 167 aa8.6□□□□□ -1.03
VCL-202ENST00000372755 PYGO1Q9Y3Y4 419 aa8.6□□□□□ -1.03
VCL-202ENST00000372755 MRPL55Q7Z7F7 128 aaKnown RBP8.6□□□□□ -1.03
VCL-202ENST00000372755 RIF1Q5UIP0 2472 aaKnown RBP8.6□□□□□ -1.03
VCL-202ENST00000372755 TRIAP1O43715 76 aa8.6□□□□□ -1.03
VCL-202ENST00000372755 GPR179Q6PRD1 2367 aa8.59□□□□□ -1.03
VCL-202ENST00000372755 MT-ATP8P03928 68 aa8.59□□□□□ -1.03
VCL-202ENST00000372755 C6orf99Q4VX62 202 aa8.59□□□□□ -1.03
VCL-202ENST00000372755 ZFAND3Q9H8U3 227 aa8.59□□□□□ -1.03
VCL-202ENST00000372755 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.59□□□□□ -1.03
VCL-202ENST00000372755 INAFM1C9JVW0 142 aa8.59□□□□□ -1.03
VCL-202ENST00000372755 TIMM17BO60830 172 aa8.59□□□□□ -1.03
VCL-202ENST00000372755 Q6ZSV7 163 aa8.59□□□□□ -1.03
VCL-202ENST00000372755 C1orf158Q8N1D5 194 aa8.59□□□□□ -1.03
VCL-202ENST00000372755 U3KQK5 164 aa8.59□□□□□ -1.03
VCL-202ENST00000372755 M0R378 163 aa8.59□□□□□ -1.03
VCL-202ENST00000372755 BRWD1-AS2P59051 145 aa8.58□□□□□ -1.04
VCL-202ENST00000372755 MBD6Q96DN6 1003 aa8.58□□□□□ -1.04
VCL-202ENST00000372755 NDUFC1O43677 76 aa8.58□□□□□ -1.04
VCL-202ENST00000372755 CD164L2Q6UWJ8 174 aa8.58□□□□□ -1.04
VCL-202ENST00000372755 LINC00482Q8N8I6 264 aa8.58□□□□□ -1.04
VCL-202ENST00000372755 WISP2O76076 250 aa8.58□□□□□ -1.04
VCL-202ENST00000372755 LY6LH3BQJ8 138 aa8.57□□□□□ -1.04
VCL-202ENST00000372755 TRBV6-5A0A0K0K1A5 114 aa8.57□□□□□ -1.04
VCL-202ENST00000372755 IGLV4-69A0A075B6H9 119 aa8.57□□□□□ -1.04
VCL-202ENST00000372755 DCANP1Q8TF63 244 aa8.57□□□□□ -1.04
VCL-202ENST00000372755 BBC3Q96PG8 261 aaPredicted RBP8.56□□□□□ -1.04
VCL-202ENST00000372755 ANAPC1Q9H1A4 1944 aa8.56□□□□□ -1.04
VCL-202ENST00000372755 GTF3C1Q12789 2109 aa8.56□□□□□ -1.04
VCL-202ENST00000372755 TRBV27A0A0K0K1C4 114 aa8.56□□□□□ -1.04
VCL-202ENST00000372755 RBX1P62877 108 aa8.56□□□□□ -1.04
VCL-202ENST00000372755 RNF185Q96GF1 192 aa8.56□□□□□ -1.04
VCL-202ENST00000372755 NOTCH3Q9UM47 2321 aa8.56□□□□□ -1.04
VCL-202ENST00000372755 EIF4EBP1Q13541 118 aaPredicted RBP8.56□□□□□ -1.04
VCL-202ENST00000372755 LOC107984640A0A0U1RRK4 108 aa8.56□□□□□ -1.04
VCL-202ENST00000372755 C3orf84H3BNL1 204 aa8.55□□□□□ -1.04
VCL-202ENST00000372755 PSMG3-AS1Q96PY0 264 aa8.55□□□□□ -1.04
VCL-202ENST00000372755 Q8N976 141 aa8.55□□□□□ -1.04
VCL-202ENST00000372755 SERP1Q9Y6X1 66 aa8.55□□□□□ -1.04
VCL-202ENST00000372755 MAPKAPK5-AS1Q8N8E1 139 aa8.55□□□□□ -1.04
VCL-202ENST00000372755 IGKV2-28A0A075B6P5 120 aa8.55□□□□□ -1.04
VCL-202ENST00000372755 IGKV2D-28P01615 120 aa8.55□□□□□ -1.04
VCL-202ENST00000372755 LELP1Q5T871 98 aa8.55□□□□□ -1.04
VCL-202ENST00000372755 C1orf229Q6ZS94 237 aaPredicted RBP8.55□□□□□ -1.04
VCL-202ENST00000372755 MED13Q9UHV7 2174 aa8.55□□□□□ -1.04
VCL-202ENST00000372755 FAM19A3Q7Z5A8 133 aa8.55□□□□□ -1.04
VCL-202ENST00000372755 CREBBPQ92793 2442 aa8.54□□□□□ -1.04
VCL-202ENST00000372755 UBE2D4Q9Y2X8 147 aa8.54□□□□□ -1.04
VCL-202ENST00000372755 CHD3Q12873 2000 aaKnown RBP8.54□□□□□ -1.04
VCL-202ENST00000372755 SPINK6Q6UWN8 80 aa8.54□□□□□ -1.04
VCL-202ENST00000372755 Q8N9L7 120 aa8.54□□□□□ -1.04
VCL-202ENST00000372755 DYSFO75923 2080 aa8.54□□□□□ -1.04
VCL-202ENST00000372755 CRIP1P50238 77 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms