RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 DPH3P1Q9H4G8 78 aa9.45□□□□□ -0.9
GPC3-201ENST00000370818 RASL10AQ92737 203 aa9.44□□□□□ -0.9
GPC3-201ENST00000370818 MUC4Q99102 2169 aa9.44□□□□□ -0.9
GPC3-201ENST00000370818 SLC25A20O43772 301 aa9.44□□□□□ -0.9
GPC3-201ENST00000370818 DUSP14O95147 198 aaKnown RBP9.44□□□□□ -0.9
GPC3-201ENST00000370818 KIF25-AS1Q9Y6Z4 181 aa9.44□□□□□ -0.9
GPC3-201ENST00000370818 KNCNA6PVL3 124 aa9.43□□□□□ -0.9
GPC3-201ENST00000370818 M0QXV9 152 aa9.43□□□□□ -0.9
GPC3-201ENST00000370818 CFC1BP0CG36 223 aa9.43□□□□□ -0.9
GPC3-201ENST00000370818 CFC1P0CG37 223 aa9.43□□□□□ -0.9
GPC3-201ENST00000370818 LINC00315P59091 139 aa9.43□□□□□ -0.9
GPC3-201ENST00000370818 DEFB131AP59861 70 aa9.43□□□□□ -0.9
GPC3-201ENST00000370818 NEXN-AS1Q8NBZ9 246 aa9.43□□□□□ -0.9
GPC3-201ENST00000370818 IGHV3-16A0A0C4DH30 117 aa9.43□□□□□ -0.9
GPC3-201ENST00000370818 RNASE1P07998 156 aaKnown RBP9.43□□□□□ -0.9
GPC3-201ENST00000370818 CD28P10747 220 aa9.43□□□□□ -0.9
GPC3-201ENST00000370818 POM121L12Q8N7R1 296 aa9.43□□□□□ -0.9
GPC3-201ENST00000370818 SPANXA1Q9NS26 97 aa9.43□□□□□ -0.9
GPC3-201ENST00000370818 MDFICQ9P1T7 246 aa9.43□□□□□ -0.9
GPC3-201ENST00000370818 FASNP49327 2511 aaKnown RBP9.43□□□□□ -0.9
GPC3-201ENST00000370818 TRAV2A0A0B4J234 112 aa9.42□□□□□ -0.9
GPC3-201ENST00000370818 DEFB114Q30KQ6 69 aa9.42□□□□□ -0.9
GPC3-201ENST00000370818 MEIG1Q5JSS6 88 aa9.42□□□□□ -0.9
GPC3-201ENST00000370818 Q8N1Y9 231 aa9.42□□□□□ -0.9
GPC3-201ENST00000370818 C10orf126Q8N4M7 172 aa9.42□□□□□ -0.9
GPC3-201ENST00000370818 RPL39LQ96EH5 51 aaKnown RBP9.42□□□□□ -0.9
GPC3-201ENST00000370818 C9orf85Q96MD7 179 aa9.42□□□□□ -0.9
GPC3-201ENST00000370818 JPT2Q9H910 190 aa9.42□□□□□ -0.9
GPC3-201ENST00000370818 MTORP42345 2549 aa9.42□□□□□ -0.9
GPC3-201ENST00000370818 LINC01006Q8NI28 216 aa9.42□□□□□ -0.9
GPC3-201ENST00000370818 IGHV1OR15-1A0A075B7D0 117 aa9.41□□□□□ -0.9
GPC3-201ENST00000370818 A0A1W2PRX2 142 aa9.41□□□□□ -0.9
GPC3-201ENST00000370818 A8MTW9 85 aa9.41□□□□□ -0.9
GPC3-201ENST00000370818 C9JAW5 83 aa9.41□□□□□ -0.9
GPC3-201ENST00000370818 MGPP08493 103 aa9.41□□□□□ -0.9
GPC3-201ENST00000370818 RBMY1A1P0DJD3 496 aaKnown RBP9.41□□□□□ -0.9
GPC3-201ENST00000370818 RBMY1CP0DJD4 496 aa9.41□□□□□ -0.9
GPC3-201ENST00000370818 RBMY1FQ15415 496 aaKnown RBP9.41□□□□□ -0.9
GPC3-201ENST00000370818 SMIM2Q9BVW6 85 aa9.41□□□□□ -0.9
GPC3-201ENST00000370818 GCN1Q92616 2671 aaKnown RBP9.41□□□□□ -0.9
GPC3-201ENST00000370818 RBMY1BA6NDE4 496 aaKnown RBP9.41□□□□□ -0.9
GPC3-201ENST00000370818 RBMY1EA6NEQ0 496 aaKnown RBP9.41□□□□□ -0.9
GPC3-201ENST00000370818 H3BMM0 161 aa9.41□□□□□ -0.9
GPC3-201ENST00000370818 RBMY1DP0C7P1 496 aaKnown RBP9.41□□□□□ -0.9
GPC3-201ENST00000370818 SUMO2P61956 95 aaKnown RBP9.41□□□□□ -0.9
GPC3-201ENST00000370818 DYNLRB2Q8TF09 96 aa9.41□□□□□ -0.9
GPC3-201ENST00000370818 SCGB3A1Q96QR1 104 aa9.41□□□□□ -0.9
GPC3-201ENST00000370818 A0A0J9YY99 117 aa9.4□□□□□ -0.9
GPC3-201ENST00000370818 SMR3AQ99954 134 aa9.4□□□□□ -0.9
GPC3-201ENST00000370818 CITED2Q99967 270 aaPredicted RBP9.4□□□□□ -0.9
GPC3-201ENST00000370818 PPDPFQ9H3Y8 114 aa9.4□□□□□ -0.9
GPC3-201ENST00000370818 C16orf95Q9H693 158 aa9.4□□□□□ -0.9
GPC3-201ENST00000370818 TRPT1Q86TN4 253 aaKnown RBP9.4□□□□□ -0.9
GPC3-201ENST00000370818 CCL24O00175 119 aa9.39□□□□□ -0.91
GPC3-201ENST00000370818 IGHV3-30P01768 117 aa9.39□□□□□ -0.91
GPC3-201ENST00000370818 IGHV3-30-5P0DP03 117 aa9.39□□□□□ -0.91
GPC3-201ENST00000370818 C15orf53Q8NAA6 179 aa9.39□□□□□ -0.91
GPC3-201ENST00000370818 NTN5Q8WTR8 489 aaPredicted RBP9.39□□□□□ -0.91
GPC3-201ENST00000370818 MAP6D1Q9H9H5 199 aa9.39□□□□□ -0.91
GPC3-201ENST00000370818 PRO1854Q9UHT4 67 aa9.39□□□□□ -0.91
GPC3-201ENST00000370818 ZNF256Q9Y2P7 627 aaPredicted RBP9.39□□□□□ -0.91
GPC3-201ENST00000370818 TOMM6Q96B49 74 aa9.39□□□□□ -0.91
GPC3-201ENST00000370818 HECTD1Q9ULT8 2610 aa9.38□□□□□ -0.91
GPC3-201ENST00000370818 A0A087WWL8 130 aa9.38□□□□□ -0.91
GPC3-201ENST00000370818 BAALCQ8WXS3 180 aa9.38□□□□□ -0.91
GPC3-201ENST00000370818 HILS1P60008 231 aa9.38□□□□□ -0.91
GPC3-201ENST00000370818 ORMDL2Q53FV1 153 aa9.36□□□□□ -0.91
GPC3-201ENST00000370818 SUMO4Q6EEV6 95 aa9.36□□□□□ -0.91
GPC3-201ENST00000370818 SLC25A29Q8N8R3 303 aa9.36□□□□□ -0.91
GPC3-201ENST00000370818 TMEM126AQ9H061 195 aa9.36□□□□□ -0.91
GPC3-201ENST00000370818 SETD2Q9BYW2 2564 aaPredicted RBP9.36□□□□□ -0.91
GPC3-201ENST00000370818 TRAV8-4A0A0B4J246 113 aa9.36□□□□□ -0.91
GPC3-201ENST00000370818 TEX49A0A1B0GTD5 131 aa9.36□□□□□ -0.91
GPC3-201ENST00000370818 PPP1R17O96001 155 aa9.36□□□□□ -0.91
GPC3-201ENST00000370818 CRYGDP07320 174 aa9.36□□□□□ -0.91
GPC3-201ENST00000370818 RPL13AP40429 203 aaKnown RBP9.35□□□□□ -0.91
GPC3-201ENST00000370818 ODF3L2Q3SX64 289 aa9.35□□□□□ -0.91
GPC3-201ENST00000370818 LINC01600Q96MT4 127 aa9.35□□□□□ -0.91
GPC3-201ENST00000370818 LINC01587Q99440 93 aa9.35□□□□□ -0.91
GPC3-201ENST00000370818 EIF4EBP3O60516 100 aaPredicted RBP9.35□□□□□ -0.91
GPC3-201ENST00000370818 PRM2P04554 102 aa9.35□□□□□ -0.91
GPC3-201ENST00000370818 FAM74A4Q5TZK3 123 aa9.35□□□□□ -0.91
GPC3-201ENST00000370818 C3orf56Q8N813 242 aa9.35□□□□□ -0.91
GPC3-201ENST00000370818 TRGV11A0A075B6L2 103 aa9.34□□□□□ -0.91
GPC3-201ENST00000370818 TRAV25A0A0B4J276 109 aa9.34□□□□□ -0.91
GPC3-201ENST00000370818 IGHV3-33P01772 117 aa9.34□□□□□ -0.91
GPC3-201ENST00000370818 ZNF876PQ49A33 203 aa9.34□□□□□ -0.91
GPC3-201ENST00000370818 F5H697 171 aa9.34□□□□□ -0.91
GPC3-201ENST00000370818 HTN1P15515 57 aa9.34□□□□□ -0.91
GPC3-201ENST00000370818 POLR2KP53803 58 aaKnown RBP9.34□□□□□ -0.91
GPC3-201ENST00000370818 C2orf66Q6UXQ4 117 aa9.34□□□□□ -0.91
GPC3-201ENST00000370818 CHCHD5Q9BSY4 110 aa9.34□□□□□ -0.91
GPC3-201ENST00000370818 HIVEP2P31629 2446 aa9.34□□□□□ -0.91
GPC3-201ENST00000370818 WNK1Q9H4A3 2382 aa9.34□□□□□ -0.91
GPC3-201ENST00000370818 C11orf86A6NJI1 115 aa9.33□□□□□ -0.92
GPC3-201ENST00000370818 ADARB2-AS1A8MUL3 147 aa9.33□□□□□ -0.92
GPC3-201ENST00000370818 LY6G6DO95868 133 aa9.33□□□□□ -0.92
GPC3-201ENST00000370818 P0DMU3 169 aa9.33□□□□□ -0.92
GPC3-201ENST00000370818 FAM231AP0DMU4 169 aa9.33□□□□□ -0.92
GPC3-201ENST00000370818 FAM231CP0DMU5 169 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms