RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 WNK2Q9Y3S1 2297 aa7.8□□□□□ -1.16
LYSMD1-201ENST00000368908 DOPEY1Q5JWR5 2465 aa7.8□□□□□ -1.16
LYSMD1-201ENST00000368908 GCN1Q92616 2671 aaKnown RBP7.8□□□□□ -1.16
LYSMD1-201ENST00000368908 ZFP36P26651 326 aaKnown RBP7.79□□□□□ -1.16
LYSMD1-201ENST00000368908 MRPS36P82909 103 aaKnown RBP7.79□□□□□ -1.16
LYSMD1-201ENST00000368908 LINC01587Q99440 93 aa7.79□□□□□ -1.16
LYSMD1-201ENST00000368908 OPRPNQ99935 248 aaPredicted RBP7.79□□□□□ -1.16
LYSMD1-201ENST00000368908 I3L3M4 83 aa7.79□□□□□ -1.16
LYSMD1-201ENST00000368908 TIMM17BO60830 172 aa7.79□□□□□ -1.16
LYSMD1-201ENST00000368908 SAA4P35542 130 aa7.79□□□□□ -1.16
LYSMD1-201ENST00000368908 ZNF56Q15929 161 aa7.79□□□□□ -1.16
LYSMD1-201ENST00000368908 USP9YO00507 2555 aaPredicted RBP7.78□□□□□ -1.16
LYSMD1-201ENST00000368908 IGHV3-64A0A075B6Q5 118 aa7.78□□□□□ -1.16
LYSMD1-201ENST00000368908 IGHV3-16A0A0C4DH30 117 aa7.78□□□□□ -1.16
LYSMD1-201ENST00000368908 EDA2RQ9HAV5 297 aa7.78□□□□□ -1.16
LYSMD1-201ENST00000368908 MOB4Q9Y3A3 225 aa7.78□□□□□ -1.16
LYSMD1-201ENST00000368908 IGHV1-58A0A0C4DH39 117 aa7.78□□□□□ -1.16
LYSMD1-201ENST00000368908 H3BUA1 57 aa7.78□□□□□ -1.16
LYSMD1-201ENST00000368908 TMEM61Q8N0U2 210 aa7.78□□□□□ -1.16
LYSMD1-201ENST00000368908 DEFB104AQ8WTQ1 72 aa7.78□□□□□ -1.16
LYSMD1-201ENST00000368908 TRGV11A0A075B6L2 103 aa7.77□□□□□ -1.17
LYSMD1-201ENST00000368908 C19orf84I3L1E1 186 aa7.77□□□□□ -1.17
LYSMD1-201ENST00000368908 ID1P41134 155 aa7.77□□□□□ -1.17
LYSMD1-201ENST00000368908 USMG5Q96IX5 58 aa7.77□□□□□ -1.17
LYSMD1-201ENST00000368908 NDUFA12Q9UI09 145 aa7.77□□□□□ -1.17
LYSMD1-201ENST00000368908 FAM74A4Q5TZK3 123 aa7.76□□□□□ -1.17
LYSMD1-201ENST00000368908 ZNF580Q9UK33 172 aa7.76□□□□□ -1.17
LYSMD1-201ENST00000368908 NPFFO15130 113 aa7.76□□□□□ -1.17
LYSMD1-201ENST00000368908 TRBV12-3P01733 135 aa7.76□□□□□ -1.17
LYSMD1-201ENST00000368908 ATP5G1P05496 136 aa7.76□□□□□ -1.17
LYSMD1-201ENST00000368908 ADAMTSL4-AS1Q5T5F5 129 aa7.76□□□□□ -1.17
LYSMD1-201ENST00000368908 CLEC2BQ92478 149 aa7.76□□□□□ -1.17
LYSMD1-201ENST00000368908 DUX3Q96PT4 197 aa7.76□□□□□ -1.17
LYSMD1-201ENST00000368908 PRSS2P07478 247 aa7.75□□□□□ -1.17
LYSMD1-201ENST00000368908 CD28P10747 220 aa7.75□□□□□ -1.17
LYSMD1-201ENST00000368908 RPL11P62913 178 aaKnown RBP7.75□□□□□ -1.17
LYSMD1-201ENST00000368908 VSIG2Q96IQ7 327 aa7.75□□□□□ -1.17
LYSMD1-201ENST00000368908 CHCHD5Q9BSY4 110 aa7.75□□□□□ -1.17
LYSMD1-201ENST00000368908 RHPN1-AS1Q9BWJ2 59 aa7.75□□□□□ -1.17
LYSMD1-201ENST00000368908 PRRC2AP48634 2157 aaKnown RBP7.75□□□□□ -1.17
LYSMD1-201ENST00000368908 PTPN13Q12923 2485 aa7.75□□□□□ -1.17
LYSMD1-201ENST00000368908 DOPEY2Q9Y3R5 2298 aa7.75□□□□□ -1.17
LYSMD1-201ENST00000368908 TRAV12-3A0A0B4J271 114 aa7.75□□□□□ -1.17
LYSMD1-201ENST00000368908 TINCRA0A1B0GVN0 87 aa7.75□□□□□ -1.17
LYSMD1-201ENST00000368908 FAM104AQ969W3 186 aa7.75□□□□□ -1.17
LYSMD1-201ENST00000368908 VPREB3Q9UKI3 123 aa7.75□□□□□ -1.17
LYSMD1-201ENST00000368908 ADARB2-AS1A8MUL3 147 aa7.74□□□□□ -1.17
LYSMD1-201ENST00000368908 LINC00643Q86TS7 51 aa7.74□□□□□ -1.17
LYSMD1-201ENST00000368908 DAZ1Q9NQZ3 744 aaKnown RBP7.74□□□□□ -1.17
LYSMD1-201ENST00000368908 FASNP49327 2511 aaKnown RBP7.73□□□□□ -1.17
LYSMD1-201ENST00000368908 K7EMT4 169 aa7.73□□□□□ -1.17
LYSMD1-201ENST00000368908 SDIM1Q6ZPB5 146 aa7.73□□□□□ -1.17
LYSMD1-201ENST00000368908 DCANP1Q8TF63 244 aa7.73□□□□□ -1.17
LYSMD1-201ENST00000368908 ITPR2Q14571 2701 aa7.73□□□□□ -1.17
LYSMD1-201ENST00000368908 TRAV8-3A0A0A6YYJ7 113 aa7.73□□□□□ -1.17
LYSMD1-201ENST00000368908 FAM236AA0A1B0GUQ0 79 aa7.73□□□□□ -1.17
LYSMD1-201ENST00000368908 FAM236BA0A1B0GV22 79 aa7.73□□□□□ -1.17
LYSMD1-201ENST00000368908 C3orf22Q8N5N4 141 aa7.73□□□□□ -1.17
LYSMD1-201ENST00000368908 APCP25054 2843 aa7.72□□□□□ -1.17
LYSMD1-201ENST00000368908 IGHV1OR15-1A0A075B7D0 117 aa7.72□□□□□ -1.17
LYSMD1-201ENST00000368908 DNAJC30Q96LL9 226 aa7.72□□□□□ -1.17
LYSMD1-201ENST00000368908 UQCRQO14949 82 aa7.72□□□□□ -1.17
LYSMD1-201ENST00000368908 CXCL5P42830 114 aa7.72□□□□□ -1.17
LYSMD1-201ENST00000368908 NDUFA1O15239 70 aa7.71□□□□□ -1.17
LYSMD1-201ENST00000368908 TMEM219Q86XT9 240 aa7.71□□□□□ -1.17
LYSMD1-201ENST00000368908 RNF152Q8N8N0 203 aa7.71□□□□□ -1.17
LYSMD1-201ENST00000368908 IGKV3-7A0A075B6H7 116 aa7.71□□□□□ -1.18
LYSMD1-201ENST00000368908 COX7A2LO14548 114 aa7.71□□□□□ -1.18
LYSMD1-201ENST00000368908 Q6ZSV7 163 aa7.71□□□□□ -1.18
LYSMD1-201ENST00000368908 LINC00527Q9UJ94 153 aa7.71□□□□□ -1.18
LYSMD1-201ENST00000368908 NDUFA7O95182 113 aa7.7□□□□□ -1.18
LYSMD1-201ENST00000368908 C9orf153Q5TBE3 101 aa7.7□□□□□ -1.18
LYSMD1-201ENST00000368908 COPS9Q8WXC6 57 aa7.7□□□□□ -1.18
LYSMD1-201ENST00000368908 LINC00526Q96FQ7 95 aa7.7□□□□□ -1.18
LYSMD1-201ENST00000368908 ANKRD17O75179 2603 aaKnown RBP7.7□□□□□ -1.18
LYSMD1-201ENST00000368908 TRACP01848 142 aa7.7□□□□□ -1.18
LYSMD1-201ENST00000368908 IGHG2P01859 326 aa7.7□□□□□ -1.18
LYSMD1-201ENST00000368908 NRGNQ92686 78 aa7.7□□□□□ -1.18
LYSMD1-201ENST00000368908 CITED2Q99967 270 aaPredicted RBP7.7□□□□□ -1.18
LYSMD1-201ENST00000368908 PEMTQ9UBM1 199 aa7.7□□□□□ -1.18
LYSMD1-201ENST00000368908 HECTD1Q9ULT8 2610 aa7.69□□□□□ -1.18
LYSMD1-201ENST00000368908 IGLV5-45A0A087WSX0 123 aa7.69□□□□□ -1.18
LYSMD1-201ENST00000368908 FAM222AQ5U5X8 452 aa7.69□□□□□ -1.18
LYSMD1-201ENST00000368908 DAND5Q8N907 189 aa7.69□□□□□ -1.18
LYSMD1-201ENST00000368908 IGHV3-11P01762 117 aa7.69□□□□□ -1.18
LYSMD1-201ENST00000368908 TIRAPP58753 221 aa7.69□□□□□ -1.18
LYSMD1-201ENST00000368908 LMO4P61968 165 aa7.69□□□□□ -1.18
LYSMD1-201ENST00000368908 CIRBPQ14011 172 aaKnown RBP7.69□□□□□ -1.18
LYSMD1-201ENST00000368908 C5orf38Q86SI9 138 aa7.69□□□□□ -1.18
LYSMD1-201ENST00000368908 SMCR5Q8TEV8 140 aa7.69□□□□□ -1.18
LYSMD1-201ENST00000368908 PPDPFQ9H3Y8 114 aa7.69□□□□□ -1.18
LYSMD1-201ENST00000368908 BAHCC1Q9P281 2608 aa7.68□□□□□ -1.18
LYSMD1-201ENST00000368908 A0A1B0GX51 115 aa7.68□□□□□ -1.18
LYSMD1-201ENST00000368908 A0A1W2PPR1 153 aa7.68□□□□□ -1.18
LYSMD1-201ENST00000368908 LRRC75A-AS1Q8N1F1 130 aa7.68□□□□□ -1.18
LYSMD1-201ENST00000368908 UBE2D4Q9Y2X8 147 aa7.68□□□□□ -1.18
LYSMD1-201ENST00000368908 IGLV1-40P01703 118 aa7.68□□□□□ -1.18
LYSMD1-201ENST00000368908 NPC2P61916 151 aa7.68□□□□□ -1.18
LYSMD1-201ENST00000368908 CHCHD7Q9BUK0 85 aa7.68□□□□□ -1.18
LYSMD1-201ENST00000368908 PIK3CD-AS1Q5SR53 167 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms