RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TRBV20OR9-2A0A075B6H5 130 aa10.21□□□□□ -0.77
CKS1B-202ENST00000368436 TEX46H3BTG2 121 aa10.21□□□□□ -0.77
CKS1B-202ENST00000368436 PDE6DO43924 150 aa10.21□□□□□ -0.77
CKS1B-202ENST00000368436 NTF3P20783 257 aa10.21□□□□□ -0.77
CKS1B-202ENST00000368436 PLA2G2DQ9UNK4 145 aa10.21□□□□□ -0.77
CKS1B-202ENST00000368436 IGHV3-64A0A075B6Q5 118 aa10.2□□□□□ -0.78
CKS1B-202ENST00000368436 IFNA1P01562 189 aa10.2□□□□□ -0.78
CKS1B-202ENST00000368436 BIN3Q9NQY0 253 aa10.2□□□□□ -0.78
CKS1B-202ENST00000368436 CTRLP40313 264 aa10.19□□□□□ -0.78
CKS1B-202ENST00000368436 SULT1A2P50226 295 aa10.19□□□□□ -0.78
CKS1B-202ENST00000368436 COTL1Q14019 142 aa10.19□□□□□ -0.78
CKS1B-202ENST00000368436 EIF5AL1Q6IS14 154 aaKnown RBP10.19□□□□□ -0.78
CKS1B-202ENST00000368436 Q6ZRU5 148 aa10.19□□□□□ -0.78
CKS1B-202ENST00000368436 RNF185Q96GF1 192 aa10.19□□□□□ -0.78
CKS1B-202ENST00000368436 CNFNQ9BYD5 112 aa10.19□□□□□ -0.78
CKS1B-202ENST00000368436 AP5S1Q9NUS5 200 aa10.19□□□□□ -0.78
CKS1B-202ENST00000368436 MED9Q9NWA0 146 aa10.19□□□□□ -0.78
CKS1B-202ENST00000368436 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.18□□□□□ -0.78
CKS1B-202ENST00000368436 UBE2L6O14933 153 aa10.18□□□□□ -0.78
CKS1B-202ENST00000368436 MT1HL1P0DM35 61 aa10.18□□□□□ -0.78
CKS1B-202ENST00000368436 AMTP48728 403 aa10.18□□□□□ -0.78
CKS1B-202ENST00000368436 NUDT10Q8NFP7 164 aa10.18□□□□□ -0.78
CKS1B-202ENST00000368436 NUDT11Q96G61 164 aa10.18□□□□□ -0.78
CKS1B-202ENST00000368436 A0A087WYN8 130 aa10.17□□□□□ -0.78
CKS1B-202ENST00000368436 GATD1Q8NB37 220 aa10.17□□□□□ -0.78
CKS1B-202ENST00000368436 SPACA4Q8TDM5 124 aa10.17□□□□□ -0.78
CKS1B-202ENST00000368436 CHTF8P0CG12 524 aa10.16□□□□□ -0.78
CKS1B-202ENST00000368436 BCL2P10415 239 aa10.16□□□□□ -0.78
CKS1B-202ENST00000368436 C15orf56Q8N910 161 aa10.16□□□□□ -0.78
CKS1B-202ENST00000368436 UBR4Q5T4S7 5183 aa10.15□□□□□ -0.78
CKS1B-202ENST00000368436 GAGE12HA6NDE8 117 aa10.15□□□□□ -0.78
CKS1B-202ENST00000368436 TWIST1Q15672 202 aa10.15□□□□□ -0.78
CKS1B-202ENST00000368436 CFAP161Q6P656 301 aa10.15□□□□□ -0.78
CKS1B-202ENST00000368436 DPH3Q96FX2 82 aa10.15□□□□□ -0.78
CKS1B-202ENST00000368436 PLAC8Q9NZF1 115 aa10.15□□□□□ -0.78
CKS1B-202ENST00000368436 RPP21Q9H633 154 aaKnown RBP10.14□□□□□ -0.79
CKS1B-202ENST00000368436 TRAV26-2A0A0B4J265 109 aa10.13□□□□□ -0.79
CKS1B-202ENST00000368436 K7EN84 100 aa10.13□□□□□ -0.79
CKS1B-202ENST00000368436 NCR2O95944 276 aa10.13□□□□□ -0.79
CKS1B-202ENST00000368436 TAGLN2P37802 199 aaKnown RBP10.13□□□□□ -0.79
CKS1B-202ENST00000368436 OCC1Q8TAD7 63 aa10.13□□□□□ -0.79
CKS1B-202ENST00000368436 RNASE7Q9H1E1 156 aaKnown RBP10.13□□□□□ -0.79
CKS1B-202ENST00000368436 H7C423 109 aa10.12□□□□□ -0.79
CKS1B-202ENST00000368436 Q6ZNX1 250 aa10.12□□□□□ -0.79
CKS1B-202ENST00000368436 RPL39LQ96EH5 51 aaKnown RBP10.12□□□□□ -0.79
CKS1B-202ENST00000368436 RPS10P46783 165 aaKnown RBP10.11□□□□□ -0.79
CKS1B-202ENST00000368436 COX6A2Q02221 97 aa10.11□□□□□ -0.79
CKS1B-202ENST00000368436 SLC51BQ86UW2 128 aa10.11□□□□□ -0.79
CKS1B-202ENST00000368436 GTSF1Q8WW33 167 aa10.11□□□□□ -0.79
CKS1B-202ENST00000368436 CHCHD10Q8WYQ3 142 aaPredicted RBP10.11□□□□□ -0.79
CKS1B-202ENST00000368436 IGKV3OR2-268A0A0C4DH90 116 aa10.1□□□□□ -0.79
CKS1B-202ENST00000368436 FOXA3P55318 350 aaPredicted RBP10.1□□□□□ -0.79
CKS1B-202ENST00000368436 AMMECR1LQ6DCA0 310 aa10.1□□□□□ -0.79
CKS1B-202ENST00000368436 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.09□□□□□ -0.79
CKS1B-202ENST00000368436 GVQW2A0A096LPI5 108 aaPredicted RBP10.09□□□□□ -0.79
CKS1B-202ENST00000368436 IGKV2-29A2NJV5 120 aaPredicted RBP10.09□□□□□ -0.79
CKS1B-202ENST00000368436 PHOX2AO14813 284 aa10.09□□□□□ -0.79
CKS1B-202ENST00000368436 NDUFS6O75380 124 aaKnown RBP10.09□□□□□ -0.79
CKS1B-202ENST00000368436 FGF6P10767 208 aa10.09□□□□□ -0.79
CKS1B-202ENST00000368436 HIGD2BQ4VC39 106 aa10.09□□□□□ -0.79
CKS1B-202ENST00000368436 TEX261Q6UWH6 196 aa10.09□□□□□ -0.79
CKS1B-202ENST00000368436 TCTE3Q8IZS6 198 aa10.09□□□□□ -0.79
CKS1B-202ENST00000368436 PRSS3P2Q8NHM4 247 aa10.09□□□□□ -0.79
CKS1B-202ENST00000368436 APCSP02743 223 aa10.08□□□□□ -0.8
CKS1B-202ENST00000368436 RNASEKQ6P5S7 137 aaKnown RBP10.08□□□□□ -0.8
CKS1B-202ENST00000368436 SMIM15Q7Z3B0 74 aa10.08□□□□□ -0.8
CKS1B-202ENST00000368436 C7orf33Q8WU49 177 aa10.08□□□□□ -0.8
CKS1B-202ENST00000368436 TRBV6-5A0A0K0K1A5 114 aa10.07□□□□□ -0.8
CKS1B-202ENST00000368436 FAM231BA6NCW3 169 aa10.07□□□□□ -0.8
CKS1B-202ENST00000368436 SDHAF1A6NFY7 115 aa10.07□□□□□ -0.8
CKS1B-202ENST00000368436 FOXI1Q12951 378 aa10.07□□□□□ -0.8
CKS1B-202ENST00000368436 C4orf48Q5BLP8 95 aa10.07□□□□□ -0.8
CKS1B-202ENST00000368436 OR5A1Q8NGJ0 315 aa10.07□□□□□ -0.8
CKS1B-202ENST00000368436 I3L3M4 83 aa10.06□□□□□ -0.8
CKS1B-202ENST00000368436 ZNF25P17030 456 aaPredicted RBP10.06□□□□□ -0.8
CKS1B-202ENST00000368436 MAJINQ3KP22 176 aa10.06□□□□□ -0.8
CKS1B-202ENST00000368436 FAM231DQ6ZW35 169 aa10.06□□□□□ -0.8
CKS1B-202ENST00000368436 IGKV2-24A0A0C4DH68 120 aa10.05□□□□□ -0.8
CKS1B-202ENST00000368436 GATCO43716 136 aaKnown RBP10.05□□□□□ -0.8
CKS1B-202ENST00000368436 ESDP10768 282 aa10.05□□□□□ -0.8
CKS1B-202ENST00000368436 PMCHP20382 165 aa10.05□□□□□ -0.8
CKS1B-202ENST00000368436 STPG4Q8N801 248 aa10.05□□□□□ -0.8
CKS1B-202ENST00000368436 TNXBP22105 4242 aa10.05□□□□□ -0.8
CKS1B-202ENST00000368436 A0A096LNI7 61 aa10.04□□□□□ -0.8
CKS1B-202ENST00000368436 A8MWL6 223 aa10.04□□□□□ -0.8
CKS1B-202ENST00000368436 TMEM250H0YL14 139 aa10.04□□□□□ -0.8
CKS1B-202ENST00000368436 PRR3P79522 188 aaKnown RBP10.04□□□□□ -0.8
CKS1B-202ENST00000368436 FAM210AQ96ND0 272 aa10.04□□□□□ -0.8
CKS1B-202ENST00000368436 LINC00959A0A1B0GUT2 108 aa10.03□□□□□ -0.8
CKS1B-202ENST00000368436 GAS8-AS1O95177 125 aa10.03□□□□□ -0.8
CKS1B-202ENST00000368436 TSHBP01222 138 aa10.03□□□□□ -0.8
CKS1B-202ENST00000368436 CT83Q5H943 113 aa10.03□□□□□ -0.8
CKS1B-202ENST00000368436 TMEM101Q96IK0 257 aa10.03□□□□□ -0.8
CKS1B-202ENST00000368436 BTF3L4Q96K17 158 aa10.03□□□□□ -0.8
CKS1B-202ENST00000368436 IGHV1-58A0A0C4DH39 117 aa10.02□□□□□ -0.81
CKS1B-202ENST00000368436 CCL25O15444 150 aa10.02□□□□□ -0.81
CKS1B-202ENST00000368436 XCL1P47992 114 aa10.02□□□□□ -0.81
CKS1B-202ENST00000368436 LINC01600Q96MT4 127 aa10.02□□□□□ -0.81
CKS1B-202ENST00000368436 POLR2KP53803 58 aaKnown RBP10.01□□□□□ -0.81
CKS1B-202ENST00000368436 LYPD6BQ8NI32 183 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms