RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 B4DSR2 109 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 ZNF736B4DX44 427 aaPredicted RBP2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 E7EQL1 145 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 LYNX1G3V0Z9 82 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 LEPROTO15243 131 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 IGLV2-23P01705 113 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 ZNF688P0C7X2 276 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 SAA1P0DJI8 122 aaPredicted RBP2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 LYNX1P0DP58 116 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 CCL3P10147 92 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 CD28P10747 220 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 PEBP1P30086 187 aaKnown RBP2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 NOXRED1Q6NXP6 359 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 C18orf65Q6ZTR6 163 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 FAM216BQ8N7L0 139 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 LINC01006Q8NI28 216 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 LMO3Q8TAP4 145 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 MYOZ3Q8TDC0 251 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 TSKUQ8WUA8 353 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 ZNF524Q96C55 264 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 KRTAP1-5Q9BYS1 174 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 TMEM242Q9NWH2 141 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 IGHV3-66A0A0C4DH42 116 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 UBE2L5PA0A1B0GUS4 154 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 GRIFINA4D1Z8 144 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 ZNF705FA8MVS1 300 aaPredicted RBP2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 INS-IGF2F8WCM5 200 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 GNGT2O14610 69 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 MSMBP08118 114 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 ZNF705BP0CI00 300 aaPredicted RBP2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 COL8A2P25067 703 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 HINT1P49773 126 aaPredicted RBP2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 FXYD7P58549 80 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 PCBD1P61457 104 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 UBE2L3P68036 154 aaKnown RBP2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 FAM104BQ5XKR9 115 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 OR2T35Q8NGX2 323 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 SCGB3A1Q96QR1 104 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 DPH3P1Q9H4G8 78 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 K7ERS5 55 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 IGKV1-16P04430 117 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 IGHV3-30-3P0DP02 117 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 PTHLHP12272 177 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 RPS10P46783 165 aaKnown RBP2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 BLCAPP62952 87 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 MRPL51Q4U2R6 128 aaKnown RBP2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 MIC13Q5XKP0 118 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 PATE2Q6UY27 113 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 ATP11AUNQ6ZP68 121 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 SPATA12Q7Z6I5 190 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 OR10AG1Q8NH19 301 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 PPDPFLQ8WWR9 84 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 PMCHL2Q9BQD1 86 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 CHCHD7Q9BUK0 85 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 C8orf17Q9NRJ1 99 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 CELA1Q9UNI1 258 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 SPCS1Q9Y6A9 102 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 VPS13DQ5THJ4 4388 aa2.43□□□□□ -2.02
ECHDC1-205ENST00000368295 ARHGAP32A7KAX9 2087 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 A0A087WWC5 75 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 IGHV3-21A0A0B4J1V1 117 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 A0A1W2PPM0 123 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 ATOX1O00244 68 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 TCL1BO95988 128 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 IGHV3-7P01780 117 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 SHBGP04278 402 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 CBLN1P23435 193 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 FUSP35637 526 aaKnown RBP eCLIP2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 TSPEAR-AS2P59090 65 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 LGALSLQ3ZCW2 172 aaPredicted RBP2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 BVES-AS1Q5T3Y7 98 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 FP248Q71RG6 208 aaPredicted RBP2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 C5orf38Q86SI9 138 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 ZFAND2AQ8N6M9 145 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 TMEM190Q8WZ59 177 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 DSCR8Q96T75 97 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 MGST2Q99735 147 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 VGLL1Q99990 258 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 PHLDA3Q9Y5J5 127 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 LY96Q9Y6Y9 160 aa2.42□□□□□ -2.02
ECHDC1-205ENST00000368295 IGHV3-49A0A0A0MS15 119 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 PIGBOS1A0A0B4J2F0 54 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 SDCBPO00560 298 aaPredicted RBP2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 BPY2O14599 106 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 IGKCP01834 107 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 IL5P05113 134 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 SSR2P43308 183 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 SPINT3P49223 89 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 CIRBPQ14011 172 aaKnown RBP2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 FAT1Q14517 4588 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 RNASE13Q5GAN3 156 aaKnown RBP2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 ZNF322Q6U7Q0 402 aaPredicted RBP2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 AMN1Q8IY45 258 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 CLDND2Q8NHS1 167 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 SPTSSAQ969W0 71 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 ZNF414Q96IQ9 312 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 C20orf78Q9BR46 151 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 DEFB126Q9BYW3 111 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 NDUFB11Q9NX14 153 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 ADCYAP1P18509 176 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms