RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 FAM236AA0A1B0GUQ0 79 aa8.94□□□□□ -0.98
CDC42BPA-202ENST00000366764 FAM236BA0A1B0GV22 79 aa8.94□□□□□ -0.98
CDC42BPA-202ENST00000366764 H7C423 109 aa8.94□□□□□ -0.98
CDC42BPA-202ENST00000366764 PYGO1Q9Y3Y4 419 aa8.93□□□□□ -0.98
CDC42BPA-202ENST00000366764 CCL24O00175 119 aa8.93□□□□□ -0.98
CDC42BPA-202ENST00000366764 Q8N6K4 173 aa8.93□□□□□ -0.98
CDC42BPA-202ENST00000366764 TMEM263Q8WUH6 116 aaKnown RBP8.93□□□□□ -0.98
CDC42BPA-202ENST00000366764 IGKV2D-26A0A0A0MRZ7 120 aa8.93□□□□□ -0.98
CDC42BPA-202ENST00000366764 NKAPP1Q8N9T2 125 aa8.93□□□□□ -0.98
CDC42BPA-202ENST00000366764 F5H768 121 aa8.93□□□□□ -0.98
CDC42BPA-202ENST00000366764 ZMAT4Q9H898 229 aa8.93□□□□□ -0.98
CDC42BPA-202ENST00000366764 A6NDX4 124 aa8.93□□□□□ -0.98
CDC42BPA-202ENST00000366764 PIK3CD-AS1Q5SR53 167 aa8.93□□□□□ -0.98
CDC42BPA-202ENST00000366764 C4orf3Q8WVX3 66 aa8.93□□□□□ -0.98
CDC42BPA-202ENST00000366764 COX7A2LO14548 114 aa8.92□□□□□ -0.98
CDC42BPA-202ENST00000366764 TNFRSF13BO14836 293 aaPredicted RBP8.92□□□□□ -0.98
CDC42BPA-202ENST00000366764 ATP5EP2Q5VTU8 51 aa8.92□□□□□ -0.98
CDC42BPA-202ENST00000366764 TRBV30A0A0K0K1B3 111 aa8.92□□□□□ -0.98
CDC42BPA-202ENST00000366764 LMO4P61968 165 aa8.92□□□□□ -0.98
CDC42BPA-202ENST00000366764 SPATA25Q9BR10 227 aa8.92□□□□□ -0.98
CDC42BPA-202ENST00000366764 UFSP1Q6NVU6 142 aa8.92□□□□□ -0.98
CDC42BPA-202ENST00000366764 RBMY1FQ15415 496 aaKnown RBP8.91□□□□□ -0.98
CDC42BPA-202ENST00000366764 RMI2Q96E14 147 aa8.91□□□□□ -0.98
CDC42BPA-202ENST00000366764 IMUPQ9GZP8 106 aa8.91□□□□□ -0.98
CDC42BPA-202ENST00000366764 ANGP03950 147 aaKnown RBP8.91□□□□□ -0.98
CDC42BPA-202ENST00000366764 PLA2G5P39877 138 aa8.91□□□□□ -0.98
CDC42BPA-202ENST00000366764 CFHR3Q02985 330 aa8.91□□□□□ -0.98
CDC42BPA-202ENST00000366764 M0QY20 66 aa8.9□□□□□ -0.98
CDC42BPA-202ENST00000366764 DPH3Q96FX2 82 aa8.9□□□□□ -0.98
CDC42BPA-202ENST00000366764 NFE4Q86UQ8 179 aa8.9□□□□□ -0.98
CDC42BPA-202ENST00000366764 TRAV4A0A0B4J268 109 aa8.9□□□□□ -0.98
CDC42BPA-202ENST00000366764 HAMPP81172 84 aa8.9□□□□□ -0.98
CDC42BPA-202ENST00000366764 TMEM223A0PJW6 202 aa8.9□□□□□ -0.98
CDC42BPA-202ENST00000366764 K7EQG2 157 aa8.9□□□□□ -0.98
CDC42BPA-202ENST00000366764 XCL1P47992 114 aa8.9□□□□□ -0.98
CDC42BPA-202ENST00000366764 hADV29S1A0JD25 119 aa8.9□□□□□ -0.99
CDC42BPA-202ENST00000366764 TRAV26-1A0A087WT03 109 aa8.9□□□□□ -0.99
CDC42BPA-202ENST00000366764 IGHV4-30-2A0A087WSY4 118 aa8.9□□□□□ -0.99
CDC42BPA-202ENST00000366764 TIRAPP58753 221 aa8.9□□□□□ -0.99
CDC42BPA-202ENST00000366764 SLURP1P55000 103 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 PRO3102Q9H379 93 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 TMEM256-PLSCR3K7ERE1 68 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 NDUFA1O15239 70 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 TMEM258P61165 79 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 CFAP126Q5VTH2 177 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 FAM240AA0A1B0GVK7 77 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 KLLNB2CW77 178 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 HIST2H2BCQ6DN03 193 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 HIST2H2BDQ6DRA6 164 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 Q96MF0 132 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 WISP2O76076 250 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 SMAD5-AS1Q9Y6J3 95 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 IGHV3-33P01772 117 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 SS18L2Q9UHA2 77 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 IGHV3-30P01768 117 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 IGHV3-30-5P0DP03 117 aa8.89□□□□□ -0.99
CDC42BPA-202ENST00000366764 SPRY2O43597 315 aa8.88□□□□□ -0.99
CDC42BPA-202ENST00000366764 NXPH4O95158 308 aa8.88□□□□□ -0.99
CDC42BPA-202ENST00000366764 TRBV12-3P01733 135 aa8.88□□□□□ -0.99
CDC42BPA-202ENST00000366764 ZNF22P17026 224 aaPredicted RBP8.88□□□□□ -0.99
CDC42BPA-202ENST00000366764 PKIGQ9Y2B9 76 aa8.88□□□□□ -0.99
CDC42BPA-202ENST00000366764 HHLA3Q9XRX5 114 aa8.87□□□□□ -0.99
CDC42BPA-202ENST00000366764 A0A1B0GX51 115 aa8.87□□□□□ -0.99
CDC42BPA-202ENST00000366764 C22orf34Q6ZV56 151 aa8.87□□□□□ -0.99
CDC42BPA-202ENST00000366764 IGLV4-3A0A075B6K6 122 aa8.87□□□□□ -0.99
CDC42BPA-202ENST00000366764 DEFB136Q30KP8 78 aa8.87□□□□□ -0.99
CDC42BPA-202ENST00000366764 MRPS12O15235 138 aaKnown RBP8.87□□□□□ -0.99
CDC42BPA-202ENST00000366764 TEX49A0A1B0GTD5 131 aa8.87□□□□□ -0.99
CDC42BPA-202ENST00000366764 MAPKAPK5-AS1Q8N8E1 139 aa8.87□□□□□ -0.99
CDC42BPA-202ENST00000366764 GYPEP15421 78 aa8.87□□□□□ -0.99
CDC42BPA-202ENST00000366764 CLEC2BQ92478 149 aa8.86□□□□□ -0.99
CDC42BPA-202ENST00000366764 MT-ATP8P03928 68 aa8.86□□□□□ -0.99
CDC42BPA-202ENST00000366764 C20orf173Q96LM9 149 aa8.86□□□□□ -0.99
CDC42BPA-202ENST00000366764 FUSP35637 526 aaKnown RBP eCLIP8.86□□□□□ -0.99
CDC42BPA-202ENST00000366764 PTH2Q96A98 100 aa8.86□□□□□ -0.99
CDC42BPA-202ENST00000366764 UQCRQO14949 82 aa8.86□□□□□ -0.99
CDC42BPA-202ENST00000366764 C11orf71Q6IPW1 123 aa8.86□□□□□ -0.99
CDC42BPA-202ENST00000366764 FAM222AQ5U5X8 452 aa8.86□□□□□ -0.99
CDC42BPA-202ENST00000366764 POLR2KP53803 58 aaKnown RBP8.85□□□□□ -0.99
CDC42BPA-202ENST00000366764 TMEM61Q8N0U2 210 aa8.85□□□□□ -0.99
CDC42BPA-202ENST00000366764 URB1-AS1Q96HZ7 61 aa8.85□□□□□ -0.99
CDC42BPA-202ENST00000366764 DAND5Q8N907 189 aa8.84□□□□□ -0.99
CDC42BPA-202ENST00000366764 MRPS36P82909 103 aaKnown RBP8.84□□□□□ -0.99
CDC42BPA-202ENST00000366764 BRI3O95415 125 aa8.84□□□□□ -0.99
CDC42BPA-202ENST00000366764 C5orf38Q86SI9 138 aa8.84□□□□□ -0.99
CDC42BPA-202ENST00000366764 TRIAP1O43715 76 aa8.84□□□□□ -0.99
CDC42BPA-202ENST00000366764 IBA57-AS1B1ANH7 110 aa8.84□□□□□ -1
CDC42BPA-202ENST00000366764 CDK2AP2O75956 126 aa8.84□□□□□ -1
CDC42BPA-202ENST00000366764 RBM3P98179 157 aaKnown RBP8.84□□□□□ -1
CDC42BPA-202ENST00000366764 APRG1Q8IVJ8 170 aa8.84□□□□□ -1
CDC42BPA-202ENST00000366764 PSMG3-AS1Q96PY0 264 aa8.84□□□□□ -1
CDC42BPA-202ENST00000366764 CEP350Q5VT06 3117 aa8.83□□□□□ -1
CDC42BPA-202ENST00000366764 DEFB113Q30KQ7 82 aa8.83□□□□□ -1
CDC42BPA-202ENST00000366764 C9orf85Q96MD7 179 aa8.83□□□□□ -1
CDC42BPA-202ENST00000366764 LECT2O14960 151 aa8.83□□□□□ -1
CDC42BPA-202ENST00000366764 RNASE3P12724 160 aaKnown RBP8.83□□□□□ -1
CDC42BPA-202ENST00000366764 MAPK1IP1LQ8NDC0 245 aa8.83□□□□□ -1
CDC42BPA-202ENST00000366764 MIR7-3HGQ8N6C7 128 aa8.83□□□□□ -1
CDC42BPA-202ENST00000366764 M0QXV9 152 aa8.82□□□□□ -1
CDC42BPA-202ENST00000366764 BPTFQ12830 3046 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms