RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 KIAA1549LQ6ZVL6 1849 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGLV4-69A0A075B6H9 119 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGHV3-72A0A0B4J1Y9 119 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGKV1-12A0A0C4DH73 117 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 TMEM223A0PJW6 202 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 A6NDX4 124 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 FAM223BA6NKX1 122 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 ZNF815PA8K554 130 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGKV1D-12P01611 117 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGLV2-8P01709 118 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 BGLAPP02818 100 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGHV4-34P06331 123 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 ZNF22P17026 224 aaPredicted RBP1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 NPPCP23582 126 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 COX7A1P24310 79 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 PLNP26678 52 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 EDDM3BP56851 147 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 REG3AQ06141 175 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 MOBPQ13875 183 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 C9orf116Q5BN46 136 aaPredicted RBP1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 ZNF818PQ6ZRF7 136 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 DYNAPQ8N1N2 210 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 Q8N6K4 173 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 Q8N9W7 124 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 C20orf203Q8NBC4 194 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 PLA2G12AQ9BZM1 189 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 CCL28Q9NRJ3 127 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 CDC42SE1Q9NRR8 79 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 NDUFA12Q9UI09 145 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 UBE2D4Q9Y2X8 147 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 ATG2BQ96BY7 2078 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 LTBP4Q8N2S1 1624 aa1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 SNRNP200O75643 2136 aaKnown RBP1.18□□□□□ -2.22
RNU4-42P-201ENST00000364738 PTPRSQ13332 1948 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 SCN3AQ9NY46 2000 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGLV3-9A0A075B6K5 115 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGHV3-74A0A0B4J1X5 117 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGHV5-51A0A0C4DH38 117 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 hDV103S1A0JD37 113 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 SDHAF1A6NFY7 115 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 TMEM14DPA8MWL7 114 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 C16orf90A8MZG2 172 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 HCG22E2RYF7 251 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 PIN1P1O15428 100 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 DNAL4O96015 105 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 INSP01308 110 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGHV3-11P01762 117 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGHV3-33P01772 117 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 CHTF8P0CG12 524 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGHV3-30-3P0DP02 117 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 TSPEAR-AS2P59090 65 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 KRTAP12-4P60329 112 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 SPTSSBQ8NFR3 76 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 PFN4Q8NHR9 129 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 SMCR5Q8TEV8 140 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 C7orf33Q8WU49 177 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 CAMK2N2Q96S95 79 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 B9D2Q9BPU9 175 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 RETNLBQ9BQ08 111 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 WFDC6Q9BQY6 131 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 SND1-IT1Q9HBX3 110 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 ZNF355PQ9NSJ1 428 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 CRCT1Q9UGL9 99 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 PLXNA2O75051 1894 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 LTBP1Q14766 1721 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 NCOA6Q14686 2063 aaPredicted RBP1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 LTBP2Q14767 1821 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 LRP4O75096 1905 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 LCTP09848 1927 aa1.17□□□□□ -2.22
RNU4-42P-201ENST00000364738 COL4A6Q14031 1691 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 BCORQ6W2J9 1755 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGLV3-12A0A075B6K2 115 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGKV2D-26A0A0A0MRZ7 120 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 TRBV6-8A0A0A6YYG3 113 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGHV3-43A0A0B4J1X8 118 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 TRAV12-1A0A0B4J245 112 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 TRAV22A0A0B4J277 110 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 A0A0J9YXY3 114 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 LINC01546A6NGU7 62 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 D6R8Y8 96 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 C5orf67F2Z3F1 127 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 CHKB-CPT1BH3BT56 60 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 K7ERS5 55 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 PPP1R17O96001 155 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 IGHV1-69P01742 117 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 MSMBP08118 114 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 CCL5P13501 91 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 SPINT3P49223 89 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 RPL38P63173 70 aaKnown RBP1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 MIAQ16674 131 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 GDF5OSQ5U4N7 250 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 CASC2Q6XLA1 102 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 LYZL2Q7Z4W2 148 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 MUSTN1Q8IVN3 82 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 ZFAND2AQ8N6M9 145 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 CNEP1R1Q8N9A8 125 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 TTTY13Q9BZ97 58 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 BPESC1Q9GZL8 116 aa1.16□□□□□ -2.22
RNU4-42P-201ENST00000364738 PROK2Q9HC23 129 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms