RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 NSD3Q9BZ95 1437 aa1.34□□□□□ -2.19
RNU6-1249P-201ENST00000363237 TRBV7-3A0A075B6L6 115 aa1.34□□□□□ -2.19
RNU6-1249P-201ENST00000363237 A0A087WTM6 91 aa1.34□□□□□ -2.19
RNU6-1249P-201ENST00000363237 ARL14EPLP0DKL9 152 aa1.34□□□□□ -2.19
RNU6-1249P-201ENST00000363237 GNG11P61952 73 aa1.34□□□□□ -2.19
RNU6-1249P-201ENST00000363237 SNHG12Q9BXW3 62 aa1.34□□□□□ -2.19
RNU6-1249P-201ENST00000363237 SCP2D1Q9UJQ7 156 aa1.34□□□□□ -2.19
RNU6-1249P-201ENST00000363237 ABCA4P78363 2273 aa1.34□□□□□ -2.2
RNU6-1249P-201ENST00000363237 LAMC3Q9Y6N6 1575 aa1.34□□□□□ -2.2
RNU6-1249P-201ENST00000363237 ABCC5O15440 1437 aa1.33□□□□□ -2.2
RNU6-1249P-201ENST00000363237 MYOM1P52179 1685 aa1.33□□□□□ -2.2
RNU6-1249P-201ENST00000363237 MAGI1Q96QZ7 1491 aaPredicted RBP1.33□□□□□ -2.2
RNU6-1249P-201ENST00000363237 FBN1P35555 2871 aaKnown RBP1.33□□□□□ -2.2
RNU6-1249P-201ENST00000363237 GNG2P59768 71 aa1.33□□□□□ -2.2
RNU6-1249P-201ENST00000363237 RP1L1Q8IWN7 2480 aaPredicted RBP1.33□□□□□ -2.2
RNU6-1249P-201ENST00000363237 FLG2Q5D862 2391 aaPredicted RBP1.33□□□□□ -2.2
RNU6-1249P-201ENST00000363237 MUC19Q7Z5P9 8384 aa1.33□□□□□ -2.2
RNU6-1249P-201ENST00000363237 ASCC3Q8N3C0 2202 aaKnown RBP1.32□□□□□ -2.2
RNU6-1249P-201ENST00000363237 ADGRL2O95490 1459 aa1.32□□□□□ -2.2
RNU6-1249P-201ENST00000363237 PPP1R17O96001 155 aa1.32□□□□□ -2.2
RNU6-1249P-201ENST00000363237 UBA52P62987 128 aaKnown RBP1.32□□□□□ -2.2
RNU6-1249P-201ENST00000363237 TSLPQ969D9 159 aa1.32□□□□□ -2.2
RNU6-1249P-201ENST00000363237 FAM167A-AS1Q96KT0 104 aa1.32□□□□□ -2.2
RNU6-1249P-201ENST00000363237 DYNLRB1Q9NP97 96 aa1.32□□□□□ -2.2
RNU6-1249P-201ENST00000363237 KIAA1551Q9HCM1 1747 aa1.32□□□□□ -2.2
RNU6-1249P-201ENST00000363237 MRC1P22897 1456 aa1.31□□□□□ -2.2
RNU6-1249P-201ENST00000363237 SHANK2Q9UPX8 1470 aa1.31□□□□□ -2.2
RNU6-1249P-201ENST00000363237 RAPGEF2Q9Y4G8 1499 aa1.31□□□□□ -2.2
RNU6-1249P-201ENST00000363237 BAZ1AQ9NRL2 1556 aaPredicted RBP1.31□□□□□ -2.2
RNU6-1249P-201ENST00000363237 TOP2BQ02880 1626 aa1.31□□□□□ -2.2
RNU6-1249P-201ENST00000363237 A0A096LNT2 108 aa1.31□□□□□ -2.2
RNU6-1249P-201ENST00000363237 PLAC4Q8WY50 150 aa1.31□□□□□ -2.2
RNU6-1249P-201ENST00000363237 WFDC6Q9BQY6 131 aa1.31□□□□□ -2.2
RNU6-1249P-201ENST00000363237 UQCR10Q9UDW1 63 aa1.31□□□□□ -2.2
RNU6-1249P-201ENST00000363237 R4GMQ9 66 aa1.31□□□□□ -2.2
RNU6-1249P-201ENST00000363237 IFT172Q9UG01 1749 aa1.31□□□□□ -2.2
RNU6-1249P-201ENST00000363237 GOLGA3Q08378 1498 aa1.31□□□□□ -2.2
RNU6-1249P-201ENST00000363237 DIP2CQ9Y2E4 1556 aa1.3□□□□□ -2.2
RNU6-1249P-201ENST00000363237 LOC285095A0A1B0GVY8 99 aa1.3□□□□□ -2.2
RNU6-1249P-201ENST00000363237 GNGT2O14610 69 aa1.3□□□□□ -2.2
RNU6-1249P-201ENST00000363237 MT-ATP8P03928 68 aa1.3□□□□□ -2.2
RNU6-1249P-201ENST00000363237 CCL18P55774 89 aa1.3□□□□□ -2.2
RNU6-1249P-201ENST00000363237 FXYD6P3P58550 94 aa1.3□□□□□ -2.2
RNU6-1249P-201ENST00000363237 SPAG11BQ08648 103 aa1.3□□□□□ -2.2
RNU6-1249P-201ENST00000363237 SPAG11AQ6PDA7 123 aa1.3□□□□□ -2.2
RNU6-1249P-201ENST00000363237 FAM213BQ8TBF2 198 aa1.3□□□□□ -2.2
RNU6-1249P-201ENST00000363237 Q96NJ1 140 aa1.3□□□□□ -2.2
RNU6-1249P-201ENST00000363237 NDUFA4L2Q9NRX3 87 aa1.3□□□□□ -2.2
RNU6-1249P-201ENST00000363237 LAMA4Q16363 1823 aa1.3□□□□□ -2.2
RNU6-1249P-201ENST00000363237 PRDM15P57071 1507 aaPredicted RBP1.3□□□□□ -2.2
RNU6-1249P-201ENST00000363237 hADV29S1A0JD25 119 aa1.29□□□□□ -2.2
RNU6-1249P-201ENST00000363237 CRYM-AS1A6NIL9 109 aa1.29□□□□□ -2.2
RNU6-1249P-201ENST00000363237 K7EIL1 84 aa1.29□□□□□ -2.2
RNU6-1249P-201ENST00000363237 PI4KAP42356 2102 aa1.29□□□□□ -2.2
RNU6-1249P-201ENST00000363237 RPL37P61927 97 aaKnown RBP1.29□□□□□ -2.2
RNU6-1249P-201ENST00000363237 Q0VG73 95 aa1.29□□□□□ -2.2
RNU6-1249P-201ENST00000363237 BAGE3Q86Y29 109 aa1.29□□□□□ -2.2
RNU6-1249P-201ENST00000363237 PMCHL2Q9BQD1 86 aa1.29□□□□□ -2.2
RNU6-1249P-201ENST00000363237 VAMP8Q9BV40 100 aa1.29□□□□□ -2.2
RNU6-1249P-201ENST00000363237 Q9H521 79 aa1.29□□□□□ -2.2
RNU6-1249P-201ENST00000363237 V9GYH0 126 aa1.29□□□□□ -2.2
RNU6-1249P-201ENST00000363237 LY6G6CO95867 125 aa1.28□□□□□ -2.2
RNU6-1249P-201ENST00000363237 ACYP2P14621 99 aa1.28□□□□□ -2.2
RNU6-1249P-201ENST00000363237 UBE2D3P61077 147 aa1.28□□□□□ -2.2
RNU6-1249P-201ENST00000363237 UBE2D2P62837 147 aa1.28□□□□□ -2.2
RNU6-1249P-201ENST00000363237 C6orf52Q5T4I8 152 aa1.28□□□□□ -2.2
RNU6-1249P-201ENST00000363237 Q5VV11 94 aa1.28□□□□□ -2.2
RNU6-1249P-201ENST00000363237 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.28□□□□□ -2.2
RNU6-1249P-201ENST00000363237 Q8N6K4 173 aa1.28□□□□□ -2.2
RNU6-1249P-201ENST00000363237 MANBALQ9NQG1 85 aa1.28□□□□□ -2.2
RNU6-1249P-201ENST00000363237 V9GYS6 101 aa1.28□□□□□ -2.2
RNU6-1249P-201ENST00000363237 KDM5AP29375 1690 aaKnown RBP1.28□□□□□ -2.2
RNU6-1249P-201ENST00000363237 MARF1Q9Y4F3 1742 aaKnown RBP1.28□□□□□ -2.2
RNU6-1249P-201ENST00000363237 CNTRLQ7Z7A1 2325 aa1.28□□□□□ -2.2
RNU6-1249P-201ENST00000363237 DOCK11Q5JSL3 2073 aa1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 KIF21AQ7Z4S6 1674 aa1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 ARHGEF5Q12774 1597 aa1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 CDK13Q14004 1512 aaKnown RBP1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 ANKRD36BQ8N2N9 1353 aa1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 PVALEFA0A1B0GWK0 134 aa1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 F2Z2F3 143 aa1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 CHKB-CPT1BH3BT56 60 aa1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 ATOX1O00244 68 aa1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 HMGN4O00479 90 aa1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 NDUFC1O43677 76 aa1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 COX6CP09669 75 aa1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 SEC11AP67812 179 aa1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 VMO1Q7Z5L0 202 aa1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 AMELXQ99217 191 aa1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 BPESC1Q9GZL8 116 aa1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 PRO1854Q9UHT4 67 aa1.27□□□□□ -2.21
RNU6-1249P-201ENST00000363237 SBF2Q86WG5 1849 aa1.26□□□□□ -2.21
RNU6-1249P-201ENST00000363237 TRGV1A0A0A0MS02 117 aa1.26□□□□□ -2.21
RNU6-1249P-201ENST00000363237 TRAV1-2A0A0B4J238 106 aa1.26□□□□□ -2.21
RNU6-1249P-201ENST00000363237 TRAV22A0A0B4J277 110 aa1.26□□□□□ -2.21
RNU6-1249P-201ENST00000363237 SPINT3P49223 89 aa1.26□□□□□ -2.21
RNU6-1249P-201ENST00000363237 SMIM11BQ8TCY0 68 aa1.26□□□□□ -2.21
RNU6-1249P-201ENST00000363237 CDC42SE2Q9NRR3 84 aa1.26□□□□□ -2.21
RNU6-1249P-201ENST00000363237 MED13LQ71F56 2210 aa1.25□□□□□ -2.21
RNU6-1249P-201ENST00000363237 EHBP1L1Q8N3D4 1523 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms