RNA–Protein interactions for RNA: ENST00000359574.7

LFNG-203, Transcript of LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LFNG, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LFNG-203ENST00000359574 Q6ZNX1 250 aa18■□□□□ 0.47
LFNG-203ENST00000359574 TRAV26-2A0A0B4J265 109 aa17.99■□□□□ 0.47
LFNG-203ENST00000359574 KRTAP29-1A8MX34 341 aaPredicted RBP17.99■□□□□ 0.47
LFNG-203ENST00000359574 C9orf163Q8N9P6 203 aa17.99■□□□□ 0.47
LFNG-203ENST00000359574 COTL1Q14019 142 aa17.98■□□□□ 0.47
LFNG-203ENST00000359574 GATD1Q8NB37 220 aa17.98■□□□□ 0.47
LFNG-203ENST00000359574 GTSF1Q8WW33 167 aa17.97■□□□□ 0.47
LFNG-203ENST00000359574 TRAV8-4A0A0B4J246 113 aa17.96■□□□□ 0.47
LFNG-203ENST00000359574 AMTP48728 403 aa17.96■□□□□ 0.47
LFNG-203ENST00000359574 ALKAL2Q6UX46 152 aa17.96■□□□□ 0.47
LFNG-203ENST00000359574 LRP1Q07954 4544 aaKnown RBP17.96■□□□□ 0.47
LFNG-203ENST00000359574 UBE2L6O14933 153 aa17.95■□□□□ 0.46
LFNG-203ENST00000359574 AKAP14Q86UN6 197 aa17.95■□□□□ 0.46
LFNG-203ENST00000359574 CLRN3Q8NCR9 226 aa17.95■□□□□ 0.46
LFNG-203ENST00000359574 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.95■□□□□ 0.46
LFNG-203ENST00000359574 FOXA3P55318 350 aaPredicted RBP17.94■□□□□ 0.46
LFNG-203ENST00000359574 PANO1I0J062 215 aa17.93■□□□□ 0.46
LFNG-203ENST00000359574 hDV102S1A0JD36 115 aa17.92■□□□□ 0.46
LFNG-203ENST00000359574 TMEM250H0YL14 139 aa17.92■□□□□ 0.46
LFNG-203ENST00000359574 SDIM1Q6ZPB5 146 aa17.92■□□□□ 0.46
LFNG-203ENST00000359574 RPL39LQ96EH5 51 aaKnown RBP17.92■□□□□ 0.46
LFNG-203ENST00000359574 CNBPP62633 177 aaKnown RBP17.91■□□□□ 0.46
LFNG-203ENST00000359574 BLOC1S1P78537 153 aa17.91■□□□□ 0.46
LFNG-203ENST00000359574 hCG_2014768A0A024R1R8 64 aa17.91■□□□□ 0.46
LFNG-203ENST00000359574 GATCO43716 136 aaKnown RBP17.9■□□□□ 0.46
LFNG-203ENST00000359574 LYPD6BQ8NI32 183 aa17.9■□□□□ 0.46
LFNG-203ENST00000359574 RPL37AP61513 92 aaKnown RBP17.89■□□□□ 0.45
LFNG-203ENST00000359574 SLPIP03973 132 aa17.88■□□□□ 0.45
LFNG-203ENST00000359574 CEBPGP53567 150 aa17.88■□□□□ 0.45
LFNG-203ENST00000359574 FAM231DQ6ZW35 169 aa17.88■□□□□ 0.45
LFNG-203ENST00000359574 SMIM15Q7Z3B0 74 aa17.88■□□□□ 0.45
LFNG-203ENST00000359574 IGKV3OR2-268A0A0C4DH90 116 aa17.86■□□□□ 0.45
LFNG-203ENST00000359574 A8MWL6 223 aa17.85■□□□□ 0.45
LFNG-203ENST00000359574 AP5S1Q9NUS5 200 aa17.85■□□□□ 0.45
LFNG-203ENST00000359574 FAT3Q8TDW7 4589 aa17.85■□□□□ 0.45
LFNG-203ENST00000359574 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.84■□□□□ 0.45
LFNG-203ENST00000359574 IGKV2-29A2NJV5 120 aaPredicted RBP17.84■□□□□ 0.45
LFNG-203ENST00000359574 GAGE12HA6NDE8 117 aa17.84■□□□□ 0.45
LFNG-203ENST00000359574 NCR2O95944 276 aa17.84■□□□□ 0.45
LFNG-203ENST00000359574 TEX261Q6UWH6 196 aa17.84■□□□□ 0.45
LFNG-203ENST00000359574 SDHAF1A6NFY7 115 aa17.83■□□□□ 0.45
LFNG-203ENST00000359574 AMMECR1LQ6DCA0 310 aa17.83■□□□□ 0.45
LFNG-203ENST00000359574 APCSP02743 223 aa17.82■□□□□ 0.44
LFNG-203ENST00000359574 HNRNPA3P51991 378 aaKnown RBP17.82■□□□□ 0.44
LFNG-203ENST00000359574 CIRBPQ14011 172 aaKnown RBP17.82■□□□□ 0.44
LFNG-203ENST00000359574 CT83Q5H943 113 aa17.82■□□□□ 0.44
LFNG-203ENST00000359574 C15orf56Q8N910 161 aa17.82■□□□□ 0.44
LFNG-203ENST00000359574 IGHV3-64A0A075B6Q5 118 aa17.81■□□□□ 0.44
LFNG-203ENST00000359574 RNASEKQ6P5S7 137 aaKnown RBP17.81■□□□□ 0.44
LFNG-203ENST00000359574 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.8■□□□□ 0.44
LFNG-203ENST00000359574 GAS8-AS1O95177 125 aa17.8■□□□□ 0.44
LFNG-203ENST00000359574 OXTP01178 125 aa17.8■□□□□ 0.44
LFNG-203ENST00000359574 SMIM7Q9BQ49 75 aa17.8■□□□□ 0.44
LFNG-203ENST00000359574 FGF6P10767 208 aa17.79■□□□□ 0.44
LFNG-203ENST00000359574 LINC01551Q86U37 167 aa17.79■□□□□ 0.44
LFNG-203ENST00000359574 CHCHD10Q8WYQ3 142 aaPredicted RBP17.79■□□□□ 0.44
LFNG-203ENST00000359574 EIF5A2Q9GZV4 153 aaKnown RBP17.79■□□□□ 0.44
LFNG-203ENST00000359574 PKHD1L1Q86WI1 4243 aa17.79■□□□□ 0.44
LFNG-203ENST00000359574 H7C423 109 aa17.79■□□□□ 0.44
LFNG-203ENST00000359574 CHTF8P0CG12 524 aa17.79■□□□□ 0.44
LFNG-203ENST00000359574 TRBV6-5A0A0K0K1A5 114 aa17.77■□□□□ 0.43
LFNG-203ENST00000359574 FAM231BA6NCW3 169 aa17.77■□□□□ 0.43
LFNG-203ENST00000359574 HIGD1CA8MV81 97 aa17.77■□□□□ 0.43
LFNG-203ENST00000359574 I3L3M4 83 aa17.77■□□□□ 0.43
LFNG-203ENST00000359574 CFAP161Q6P656 301 aa17.77■□□□□ 0.43
LFNG-203ENST00000359574 TSKUQ8WUA8 353 aa17.77■□□□□ 0.43
LFNG-203ENST00000359574 BORCS7Q96B45 105 aa17.77■□□□□ 0.43
LFNG-203ENST00000359574 PMCHP20382 165 aa17.76■□□□□ 0.43
LFNG-203ENST00000359574 HIGD2BQ4VC39 106 aa17.76■□□□□ 0.43
LFNG-203ENST00000359574 FAM210AQ96ND0 272 aa17.76■□□□□ 0.43
LFNG-203ENST00000359574 A0A1B0GUT8 65 aa17.75■□□□□ 0.43
LFNG-203ENST00000359574 TSHBP01222 138 aa17.74■□□□□ 0.43
LFNG-203ENST00000359574 SPACA4Q8TDM5 124 aa17.74■□□□□ 0.43
LFNG-203ENST00000359574 DPH3Q96FX2 82 aa17.74■□□□□ 0.43
LFNG-203ENST00000359574 RNF185Q96GF1 192 aa17.74■□□□□ 0.43
LFNG-203ENST00000359574 ST20Q9HBF5 79 aa17.74■□□□□ 0.43
LFNG-203ENST00000359574 A0A087WYN8 130 aa17.73■□□□□ 0.43
LFNG-203ENST00000359574 ZNF727A8MUV8 499 aa17.73■□□□□ 0.43
LFNG-203ENST00000359574 NDUFS6O75380 124 aaKnown RBP17.73■□□□□ 0.43
LFNG-203ENST00000359574 TMEM191AQ9H0A3 160 aa17.73■□□□□ 0.43
LFNG-203ENST00000359574 TMEM242Q9NWH2 141 aa17.73■□□□□ 0.43
LFNG-203ENST00000359574 SRP19P09132 144 aaKnown RBP17.72■□□□□ 0.43
LFNG-203ENST00000359574 ZNF25P17030 456 aaPredicted RBP17.72■□□□□ 0.43
LFNG-203ENST00000359574 RPS10P46783 165 aaKnown RBP17.72■□□□□ 0.43
LFNG-203ENST00000359574 OSTCQ9NRP0 149 aa17.72■□□□□ 0.43
LFNG-203ENST00000359574 ESDP10768 282 aa17.71■□□□□ 0.43
LFNG-203ENST00000359574 FOXI1Q12951 378 aa17.71■□□□□ 0.43
LFNG-203ENST00000359574 HMCN2Q8NDA2 5059 aa17.71■□□□□ 0.43
LFNG-203ENST00000359574 OR5A1Q8NGJ0 315 aa17.7■□□□□ 0.42
LFNG-203ENST00000359574 RAB4AP20338 218 aa17.69■□□□□ 0.42
LFNG-203ENST00000359574 COX6A2Q02221 97 aa17.69■□□□□ 0.42
LFNG-203ENST00000359574 AMN1Q8IY45 258 aa17.69■□□□□ 0.42
LFNG-203ENST00000359574 GVQW2A0A096LPI5 108 aaPredicted RBP17.68■□□□□ 0.42
LFNG-203ENST00000359574 XCL1P47992 114 aa17.68■□□□□ 0.42
LFNG-203ENST00000359574 POLR2KP53803 58 aaKnown RBP17.68■□□□□ 0.42
LFNG-203ENST00000359574 MRAP2Q96G30 205 aa17.68■□□□□ 0.42
LFNG-203ENST00000359574 TMEM101Q96IK0 257 aa17.68■□□□□ 0.42
LFNG-203ENST00000359574 BTF3L4Q96K17 158 aa17.68■□□□□ 0.42
LFNG-203ENST00000359574 V9GYV3 84 aa17.68■□□□□ 0.42
LFNG-203ENST00000359574 LINC00959A0A1B0GUT2 108 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms