RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 RASL11AQ6T310 242 aa9.71□□□□□ -0.86
IFT20-202ENST00000357896 COTL1Q14019 142 aa9.7□□□□□ -0.86
IFT20-202ENST00000357896 CARD19Q96LW7 228 aa9.7□□□□□ -0.86
IFT20-202ENST00000357896 MED28Q9H204 178 aa9.7□□□□□ -0.86
IFT20-202ENST00000357896 MLST8Q9BVC4 326 aa9.69□□□□□ -0.86
IFT20-202ENST00000357896 NIT2Q9NQR4 276 aa9.69□□□□□ -0.86
IFT20-202ENST00000357896 BORCS7-ASMTA0A0B4J1R7 106 aa9.68□□□□□ -0.86
IFT20-202ENST00000357896 UPK1BO75841 260 aa9.68□□□□□ -0.86
IFT20-202ENST00000357896 MT-ND6P03923 174 aa9.68□□□□□ -0.86
IFT20-202ENST00000357896 AKR1C8PQ5T2L2 129 aa9.68□□□□□ -0.86
IFT20-202ENST00000357896 AMMECR1LQ6DCA0 310 aa9.68□□□□□ -0.86
IFT20-202ENST00000357896 BAGE2Q86Y30 109 aa9.68□□□□□ -0.86
IFT20-202ENST00000357896 PRR26Q8N8Z3 221 aa9.68□□□□□ -0.86
IFT20-202ENST00000357896 IGHV1-58A0A0C4DH39 117 aa9.67□□□□□ -0.86
IFT20-202ENST00000357896 MAP1LC3B2A6NCE7 125 aa9.67□□□□□ -0.86
IFT20-202ENST00000357896 PTTG1IPP53801 180 aa9.67□□□□□ -0.86
IFT20-202ENST00000357896 FOXI1Q12951 378 aa9.67□□□□□ -0.86
IFT20-202ENST00000357896 MAP1LC3BQ9GZQ8 125 aa9.67□□□□□ -0.86
IFT20-202ENST00000357896 FAT4Q6V0I7 4981 aa9.67□□□□□ -0.86
IFT20-202ENST00000357896 PRR4Q16378 134 aa9.66□□□□□ -0.86
IFT20-202ENST00000357896 RPL7L1Q6DKI1 246 aaKnown RBP9.66□□□□□ -0.86
IFT20-202ENST00000357896 FER1L6-AS1Q8NA97 138 aa9.66□□□□□ -0.86
IFT20-202ENST00000357896 DIRC1Q969H9 104 aa9.66□□□□□ -0.86
IFT20-202ENST00000357896 ZNF561-AS1K7EIQ3 104 aa9.65□□□□□ -0.86
IFT20-202ENST00000357896 SYCNQ0VAF6 134 aa9.65□□□□□ -0.86
IFT20-202ENST00000357896 C1orf137Q5JT78 98 aa9.65□□□□□ -0.86
IFT20-202ENST00000357896 LCE2AQ5TA79 106 aaPredicted RBP9.65□□□□□ -0.86
IFT20-202ENST00000357896 TPPP3Q9BW30 176 aa9.65□□□□□ -0.86
IFT20-202ENST00000357896 LOC107984640A0A0U1RRK4 108 aa9.64□□□□□ -0.87
IFT20-202ENST00000357896 H7C423 109 aa9.64□□□□□ -0.87
IFT20-202ENST00000357896 XCL1P47992 114 aa9.64□□□□□ -0.87
IFT20-202ENST00000357896 IFITM3Q01628 133 aa9.64□□□□□ -0.87
IFT20-202ENST00000357896 GAGE2BQ13066 116 aa9.64□□□□□ -0.87
IFT20-202ENST00000357896 RNASEKQ6P5S7 137 aaKnown RBP9.64□□□□□ -0.87
IFT20-202ENST00000357896 LINC00526Q96FQ7 95 aa9.64□□□□□ -0.87
IFT20-202ENST00000357896 TRGC1P0CF51 173 aa9.63□□□□□ -0.87
IFT20-202ENST00000357896 ISOC2Q96AB3 205 aa9.63□□□□□ -0.87
IFT20-202ENST00000357896 IGLV1-50A0A075B6I6 118 aa9.62□□□□□ -0.87
IFT20-202ENST00000357896 A0A1W2PNN7 141 aa9.62□□□□□ -0.87
IFT20-202ENST00000357896 PAGE4O60829 102 aa9.62□□□□□ -0.87
IFT20-202ENST00000357896 IGLC6P0CF74 106 aa9.62□□□□□ -0.87
IFT20-202ENST00000357896 RPS20P60866 119 aaKnown RBP9.62□□□□□ -0.87
IFT20-202ENST00000357896 OR5A1Q8NGJ0 315 aa9.62□□□□□ -0.87
IFT20-202ENST00000357896 F2Z2F3 143 aa9.61□□□□□ -0.87
IFT20-202ENST00000357896 NCR2O95944 276 aa9.61□□□□□ -0.87
IFT20-202ENST00000357896 FGF6P10767 208 aa9.61□□□□□ -0.87
IFT20-202ENST00000357896 NTF3P20783 257 aa9.61□□□□□ -0.87
IFT20-202ENST00000357896 SCO2A0A1W2PP80 73 aa9.6□□□□□ -0.87
IFT20-202ENST00000357896 CCL25O15444 150 aa9.6□□□□□ -0.87
IFT20-202ENST00000357896 PFDN1O60925 122 aa9.6□□□□□ -0.87
IFT20-202ENST00000357896 ZNF25P17030 456 aaPredicted RBP9.6□□□□□ -0.87
IFT20-202ENST00000357896 DEFA1P59665 94 aa9.6□□□□□ -0.87
IFT20-202ENST00000357896 LINC00959A0A1B0GUT2 108 aa9.59□□□□□ -0.87
IFT20-202ENST00000357896 IGLV7-43P04211 117 aa9.59□□□□□ -0.87
IFT20-202ENST00000357896 CAMPP49913 170 aa9.59□□□□□ -0.87
IFT20-202ENST00000357896 C9orf116Q5BN46 136 aaPredicted RBP9.59□□□□□ -0.87
IFT20-202ENST00000357896 TMUB2Q71RG4 321 aa9.59□□□□□ -0.87
IFT20-202ENST00000357896 BTF3L4Q96K17 158 aa9.59□□□□□ -0.87
IFT20-202ENST00000357896 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.58□□□□□ -0.88
IFT20-202ENST00000357896 TRAV1-1A0A0B4J248 108 aa9.58□□□□□ -0.88
IFT20-202ENST00000357896 IGKV2-29A2NJV5 120 aaPredicted RBP9.58□□□□□ -0.88
IFT20-202ENST00000357896 XKRY2A2RUG3 117 aa9.58□□□□□ -0.88
IFT20-202ENST00000357896 H0Y9J4 135 aa9.58□□□□□ -0.88
IFT20-202ENST00000357896 APCSP02743 223 aa9.58□□□□□ -0.88
IFT20-202ENST00000357896 OR2D3Q8NGH3 330 aa9.58□□□□□ -0.88
IFT20-202ENST00000357896 TMEM101Q96IK0 257 aa9.58□□□□□ -0.88
IFT20-202ENST00000357896 APOMO95445 188 aa9.57□□□□□ -0.88
IFT20-202ENST00000357896 SS18Q15532 418 aa9.57□□□□□ -0.88
IFT20-202ENST00000357896 CD164L2Q6UWJ8 174 aa9.57□□□□□ -0.88
IFT20-202ENST00000357896 Q6ZNX1 250 aa9.57□□□□□ -0.88
IFT20-202ENST00000357896 TSKUQ8WUA8 353 aa9.57□□□□□ -0.88
IFT20-202ENST00000357896 IGLV4-69A0A075B6H9 119 aa9.56□□□□□ -0.88
IFT20-202ENST00000357896 BCL2P10415 239 aa9.56□□□□□ -0.88
IFT20-202ENST00000357896 RPL13AP40429 203 aaKnown RBP9.56□□□□□ -0.88
IFT20-202ENST00000357896 RPL35P42766 123 aaKnown RBP9.56□□□□□ -0.88
IFT20-202ENST00000357896 UBE2D1P51668 147 aa9.56□□□□□ -0.88
IFT20-202ENST00000357896 EIF5AP63241 154 aaKnown RBP9.56□□□□□ -0.88
IFT20-202ENST00000357896 Q5BKY6 102 aa9.56□□□□□ -0.88
IFT20-202ENST00000357896 PHF5AQ7RTV0 110 aaKnown RBP9.56□□□□□ -0.88
IFT20-202ENST00000357896 EIF5AL1Q6IS14 154 aaKnown RBP9.55□□□□□ -0.88
IFT20-202ENST00000357896 LYZL1Q6UWQ5 148 aa9.55□□□□□ -0.88
IFT20-202ENST00000357896 GATD1Q8NB37 220 aa9.55□□□□□ -0.88
IFT20-202ENST00000357896 SFT2D1Q8WV19 159 aa9.55□□□□□ -0.88
IFT20-202ENST00000357896 ALG5Q9Y673 324 aa9.55□□□□□ -0.88
IFT20-202ENST00000357896 A0A087WZ39 114 aa9.54□□□□□ -0.88
IFT20-202ENST00000357896 IFNA1P01562 189 aa9.54□□□□□ -0.88
IFT20-202ENST00000357896 MALP21145 153 aa9.54□□□□□ -0.88
IFT20-202ENST00000357896 NUP35Q8NFH5 326 aa9.54□□□□□ -0.88
IFT20-202ENST00000357896 CAMK2N2Q96S95 79 aa9.54□□□□□ -0.88
IFT20-202ENST00000357896 FXYD6-FXYD2A0A087WZ82 144 aa9.53□□□□□ -0.88
IFT20-202ENST00000357896 RPL18AQ02543 176 aaKnown RBP9.53□□□□□ -0.88
IFT20-202ENST00000357896 C9orf62Q8N4C0 152 aa9.53□□□□□ -0.88
IFT20-202ENST00000357896 C19orf71A6NCJ1 209 aa9.52□□□□□ -0.89
IFT20-202ENST00000357896 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.52□□□□□ -0.89
IFT20-202ENST00000357896 GIPP09681 153 aaPredicted RBP9.52□□□□□ -0.89
IFT20-202ENST00000357896 MEF2BQ02080 365 aaPredicted RBP9.52□□□□□ -0.89
IFT20-202ENST00000357896 TWIST1Q15672 202 aa9.52□□□□□ -0.89
IFT20-202ENST00000357896 TEX261Q6UWH6 196 aa9.52□□□□□ -0.89
IFT20-202ENST00000357896 MBD3L1Q8WWY6 194 aa9.52□□□□□ -0.89
IFT20-202ENST00000357896 SDHAF1A6NFY7 115 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms