RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 TRAV8-4A0A0B4J246 113 aa7.45□□□□□ -1.22
PTPRA-203ENST00000356147 M0R2P5 195 aa7.45□□□□□ -1.22
PTPRA-203ENST00000356147 NDUFV3P56181 108 aaKnown RBP7.45□□□□□ -1.22
PTPRA-203ENST00000356147 SYNJ2BPP57105 145 aa7.45□□□□□ -1.22
PTPRA-203ENST00000356147 GAGE5Q13069 117 aa7.45□□□□□ -1.22
PTPRA-203ENST00000356147 GAGE6Q13070 117 aa7.45□□□□□ -1.22
PTPRA-203ENST00000356147 ODF3Q96PU9 254 aa7.45□□□□□ -1.22
PTPRA-203ENST00000356147 MXRA5Q9NR99 2828 aa7.45□□□□□ -1.22
PTPRA-203ENST00000356147 A0A0B4J2C4 111 aa7.45□□□□□ -1.22
PTPRA-203ENST00000356147 TRBV6-5A0A0K0K1A5 114 aa7.45□□□□□ -1.22
PTPRA-203ENST00000356147 RBMY1A1P0DJD3 496 aaKnown RBP7.45□□□□□ -1.22
PTPRA-203ENST00000356147 RBMY1CP0DJD4 496 aa7.45□□□□□ -1.22
PTPRA-203ENST00000356147 RPL32P62910 135 aaKnown RBP7.45□□□□□ -1.22
PTPRA-203ENST00000356147 RBMY1FQ15415 496 aaKnown RBP7.45□□□□□ -1.22
PTPRA-203ENST00000356147 NSUN5P1Q3KNT7 163 aa7.45□□□□□ -1.22
PTPRA-203ENST00000356147 NDUFA12Q9UI09 145 aa7.45□□□□□ -1.22
PTPRA-203ENST00000356147 KLRB1Q12918 225 aa7.45□□□□□ -1.22
PTPRA-203ENST00000356147 FAM104AQ969W3 186 aa7.45□□□□□ -1.22
PTPRA-203ENST00000356147 A0A0J9YX75 114 aa7.44□□□□□ -1.22
PTPRA-203ENST00000356147 AVPP01185 164 aa7.44□□□□□ -1.22
PTPRA-203ENST00000356147 Q6ZSN1 163 aa7.44□□□□□ -1.22
PTPRA-203ENST00000356147 LITAFQ99732 161 aa7.44□□□□□ -1.22
PTPRA-203ENST00000356147 H3BMM0 161 aa7.44□□□□□ -1.22
PTPRA-203ENST00000356147 H7C423 109 aa7.44□□□□□ -1.22
PTPRA-203ENST00000356147 UBE2WQ96B02 151 aa7.44□□□□□ -1.22
PTPRA-203ENST00000356147 ICOSQ9Y6W8 199 aa7.44□□□□□ -1.22
PTPRA-203ENST00000356147 FBN2P35556 2912 aa7.44□□□□□ -1.22
PTPRA-203ENST00000356147 RHOHQ15669 191 aa7.43□□□□□ -1.22
PTPRA-203ENST00000356147 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
PTPRA-203ENST00000356147 TRBV10-2A0A0K0K1G8 114 aa7.43□□□□□ -1.22
PTPRA-203ENST00000356147 PTPN13Q12923 2485 aa7.43□□□□□ -1.22
PTPRA-203ENST00000356147 JMJD1CQ15652 2540 aa7.43□□□□□ -1.22
PTPRA-203ENST00000356147 NIPBLQ6KC79 2804 aaeCLIP7.42□□□□□ -1.22
PTPRA-203ENST00000356147 A6NDX4 124 aa7.42□□□□□ -1.22
PTPRA-203ENST00000356147 SNRPD3P62318 126 aaKnown RBP7.42□□□□□ -1.22
PTPRA-203ENST00000356147 MAPK1IP1LQ8NDC0 245 aa7.42□□□□□ -1.22
PTPRA-203ENST00000356147 CFAP46Q8IYW2 2715 aa7.42□□□□□ -1.22
PTPRA-203ENST00000356147 IGLV1-40P01703 118 aa7.42□□□□□ -1.22
PTPRA-203ENST00000356147 IGHV4-59P01825 116 aa7.42□□□□□ -1.22
PTPRA-203ENST00000356147 IFITM1P13164 125 aa7.42□□□□□ -1.22
PTPRA-203ENST00000356147 RPL13AP40429 203 aaKnown RBP7.42□□□□□ -1.22
PTPRA-203ENST00000356147 IGHV4-30-2A0A087WSY4 118 aa7.41□□□□□ -1.22
PTPRA-203ENST00000356147 TRBV7-9A0A0J9YWB2 115 aa7.41□□□□□ -1.22
PTPRA-203ENST00000356147 DEFB136Q30KP8 78 aa7.41□□□□□ -1.22
PTPRA-203ENST00000356147 MYO18BQ8IUG5 2567 aa7.41□□□□□ -1.22
PTPRA-203ENST00000356147 FAM208BQ5VWN6 2430 aa7.41□□□□□ -1.22
PTPRA-203ENST00000356147 NDUFA7O95182 113 aa7.41□□□□□ -1.22
PTPRA-203ENST00000356147 NRGNQ92686 78 aa7.41□□□□□ -1.22
PTPRA-203ENST00000356147 TNFRSF18Q9Y5U5 241 aa7.41□□□□□ -1.22
PTPRA-203ENST00000356147 CACNA1AO00555 2505 aa7.41□□□□□ -1.22
PTPRA-203ENST00000356147 TRBV30A0A0K0K1B3 111 aa7.41□□□□□ -1.22
PTPRA-203ENST00000356147 CHCHD5Q9BSY4 110 aa7.41□□□□□ -1.22
PTPRA-203ENST00000356147 CDKN2A-AS1Q9UH64 79 aa7.41□□□□□ -1.22
PTPRA-203ENST00000356147 CHD6Q8TD26 2715 aa7.4□□□□□ -1.22
PTPRA-203ENST00000356147 SONP18583 2426 aaKnown RBP7.4□□□□□ -1.22
PTPRA-203ENST00000356147 IGHV1-58A0A0C4DH39 117 aa7.4□□□□□ -1.22
PTPRA-203ENST00000356147 GAGE12JA6NER3 117 aa7.4□□□□□ -1.22
PTPRA-203ENST00000356147 GAGE7O76087 117 aa7.4□□□□□ -1.22
PTPRA-203ENST00000356147 GAGE12FP0CL80 117 aa7.4□□□□□ -1.22
PTPRA-203ENST00000356147 GAGE12GP0CL81 117 aa7.4□□□□□ -1.22
PTPRA-203ENST00000356147 GAGE12IP0CL82 117 aa7.4□□□□□ -1.22
PTPRA-203ENST00000356147 GAGE4Q13068 117 aa7.4□□□□□ -1.22
PTPRA-203ENST00000356147 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.4□□□□□ -1.22
PTPRA-203ENST00000356147 LINC00467Q9BRT7 94 aa7.4□□□□□ -1.22
PTPRA-203ENST00000356147 K7EQG2 157 aa7.4□□□□□ -1.23
PTPRA-203ENST00000356147 ACACBO00763 2458 aa7.39□□□□□ -1.23
PTPRA-203ENST00000356147 EPG5Q9HCE0 2579 aa7.39□□□□□ -1.23
PTPRA-203ENST00000356147 DEFB131AP59861 70 aa7.39□□□□□ -1.23
PTPRA-203ENST00000356147 MRPS36P82909 103 aaKnown RBP7.39□□□□□ -1.23
PTPRA-203ENST00000356147 SMIM20Q8N5G0 67 aa7.39□□□□□ -1.23
PTPRA-203ENST00000356147 VSIG2Q96IQ7 327 aa7.39□□□□□ -1.23
PTPRA-203ENST00000356147 C18orf65Q6ZTR6 163 aa7.39□□□□□ -1.23
PTPRA-203ENST00000356147 MIAQ16674 131 aa7.38□□□□□ -1.23
PTPRA-203ENST00000356147 COX6CP09669 75 aa7.38□□□□□ -1.23
PTPRA-203ENST00000356147 COX6A2Q02221 97 aa7.38□□□□□ -1.23
PTPRA-203ENST00000356147 TRGV11A0A075B6L2 103 aa7.38□□□□□ -1.23
PTPRA-203ENST00000356147 IGHV3OR16-12A0A075B7B8 117 aa7.38□□□□□ -1.23
PTPRA-203ENST00000356147 GNLYP22749 145 aa7.38□□□□□ -1.23
PTPRA-203ENST00000356147 PSMB8P28062 276 aa7.38□□□□□ -1.23
PTPRA-203ENST00000356147 NBL1P41271 181 aa7.38□□□□□ -1.23
PTPRA-203ENST00000356147 ATP5J2P56134 94 aa7.38□□□□□ -1.23
PTPRA-203ENST00000356147 TMEM61Q8N0U2 210 aa7.38□□□□□ -1.23
PTPRA-203ENST00000356147 ABCA12Q86UK0 2595 aa7.38□□□□□ -1.23
PTPRA-203ENST00000356147 NF1P21359 2839 aa7.37□□□□□ -1.23
PTPRA-203ENST00000356147 H3BUA1 57 aa7.37□□□□□ -1.23
PTPRA-203ENST00000356147 K7EMT4 169 aa7.37□□□□□ -1.23
PTPRA-203ENST00000356147 CFHR3Q02985 330 aa7.37□□□□□ -1.23
PTPRA-203ENST00000356147 PIMREGQ9BSJ6 248 aa7.37□□□□□ -1.23
PTPRA-203ENST00000356147 CHCHD7Q9BUK0 85 aa7.37□□□□□ -1.23
PTPRA-203ENST00000356147 DEFB112Q30KQ8 113 aa7.37□□□□□ -1.23
PTPRA-203ENST00000356147 Q8N2B8 174 aa7.37□□□□□ -1.23
PTPRA-203ENST00000356147 UBE2D4Q9Y2X8 147 aa7.37□□□□□ -1.23
PTPRA-203ENST00000356147 RBMY1BA6NDE4 496 aaKnown RBP7.36□□□□□ -1.23
PTPRA-203ENST00000356147 RBMY1EA6NEQ0 496 aaKnown RBP7.36□□□□□ -1.23
PTPRA-203ENST00000356147 RBMY1DP0C7P1 496 aaKnown RBP7.36□□□□□ -1.23
PTPRA-203ENST00000356147 HOXD3P31249 432 aaPredicted RBP7.36□□□□□ -1.23
PTPRA-203ENST00000356147 SLURP1P55000 103 aa7.36□□□□□ -1.23
PTPRA-203ENST00000356147 DGAT2L7PQ6IED9 249 aa7.36□□□□□ -1.23
PTPRA-203ENST00000356147 Q9H8V8 135 aa7.36□□□□□ -1.23
PTPRA-203ENST00000356147 NAV2Q8IVL1 2488 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms