RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 FAM223AQ8IWN6 122 aa10.11□□□□□ -0.79
TRIM4-203ENST00000355947 TMEM223A0PJW6 202 aa10.1□□□□□ -0.79
TRIM4-203ENST00000355947 LINC01619G3V211 115 aa10.1□□□□□ -0.79
TRIM4-203ENST00000355947 SNRPD3P62318 126 aaKnown RBP10.1□□□□□ -0.79
TRIM4-203ENST00000355947 ICOSQ9Y6W8 199 aa10.1□□□□□ -0.79
TRIM4-203ENST00000355947 IGLV4-3A0A075B6K6 122 aa10.1□□□□□ -0.79
TRIM4-203ENST00000355947 I3L3M4 83 aa10.09□□□□□ -0.79
TRIM4-203ENST00000355947 C20orf203Q8NBC4 194 aa10.09□□□□□ -0.79
TRIM4-203ENST00000355947 KIF25-AS1Q9Y6Z4 181 aa10.09□□□□□ -0.79
TRIM4-203ENST00000355947 CSMD2Q7Z408 3487 aa10.09□□□□□ -0.79
TRIM4-203ENST00000355947 MTORP42345 2549 aa10.09□□□□□ -0.79
TRIM4-203ENST00000355947 M0QY20 66 aa10.09□□□□□ -0.79
TRIM4-203ENST00000355947 IGHV3-53P01767 116 aa10.09□□□□□ -0.79
TRIM4-203ENST00000355947 LMO4P61968 165 aa10.09□□□□□ -0.79
TRIM4-203ENST00000355947 IGHV1OR15-1A0A075B7D0 117 aa10.08□□□□□ -0.8
TRIM4-203ENST00000355947 TRAV13-1A0A0B4J241 112 aa10.08□□□□□ -0.8
TRIM4-203ENST00000355947 DEFB136Q30KP8 78 aa10.08□□□□□ -0.8
TRIM4-203ENST00000355947 CELSR2Q9HCU4 2923 aa10.08□□□□□ -0.8
TRIM4-203ENST00000355947 IGHV4-61A0A0C4DH41 118 aa10.08□□□□□ -0.8
TRIM4-203ENST00000355947 IGHV1-69P01742 117 aa10.08□□□□□ -0.8
TRIM4-203ENST00000355947 NHLRC4P0CG21 123 aaPredicted RBP10.08□□□□□ -0.8
TRIM4-203ENST00000355947 HOXD3P31249 432 aaPredicted RBP10.08□□□□□ -0.8
TRIM4-203ENST00000355947 C11orf71Q6IPW1 123 aa10.08□□□□□ -0.8
TRIM4-203ENST00000355947 AMELXQ99217 191 aa10.07□□□□□ -0.8
TRIM4-203ENST00000355947 FLNCQ14315 2725 aa10.07□□□□□ -0.8
TRIM4-203ENST00000355947 TRBV10-2A0A0K0K1G8 114 aa10.06□□□□□ -0.8
TRIM4-203ENST00000355947 SOCS3O14543 225 aa10.06□□□□□ -0.8
TRIM4-203ENST00000355947 UTP20O75691 2785 aaKnown RBP10.06□□□□□ -0.8
TRIM4-203ENST00000355947 PKD1L2Q7Z442 2459 aa10.06□□□□□ -0.8
TRIM4-203ENST00000355947 TRBV27A0A0K0K1C4 114 aa10.06□□□□□ -0.8
TRIM4-203ENST00000355947 K7ENP7 123 aa10.06□□□□□ -0.8
TRIM4-203ENST00000355947 TOMM7Q9P0U1 55 aa10.06□□□□□ -0.8
TRIM4-203ENST00000355947 TRGV11A0A075B6L2 103 aa10.05□□□□□ -0.8
TRIM4-203ENST00000355947 IGHV4OR15-8A0A075B7B6 117 aa10.05□□□□□ -0.8
TRIM4-203ENST00000355947 A0A087WW49 117 aa10.05□□□□□ -0.8
TRIM4-203ENST00000355947 H7C423 109 aa10.05□□□□□ -0.8
TRIM4-203ENST00000355947 DEFB131AP59861 70 aa10.05□□□□□ -0.8
TRIM4-203ENST00000355947 C11orf44Q8N8P7 122 aa10.05□□□□□ -0.8
TRIM4-203ENST00000355947 FAM236AA0A1B0GUQ0 79 aa10.05□□□□□ -0.8
TRIM4-203ENST00000355947 FAM236BA0A1B0GV22 79 aa10.05□□□□□ -0.8
TRIM4-203ENST00000355947 NDUFA7O95182 113 aa10.05□□□□□ -0.8
TRIM4-203ENST00000355947 KLRB1Q12918 225 aa10.05□□□□□ -0.8
TRIM4-203ENST00000355947 NRGNQ92686 78 aa10.05□□□□□ -0.8
TRIM4-203ENST00000355947 ODF3Q96PU9 254 aa10.05□□□□□ -0.8
TRIM4-203ENST00000355947 ATP5J2P56134 94 aa10.04□□□□□ -0.8
TRIM4-203ENST00000355947 VPS13CQ709C8 3753 aa10.04□□□□□ -0.8
TRIM4-203ENST00000355947 SHISA2Q6UWI4 295 aa10.04□□□□□ -0.8
TRIM4-203ENST00000355947 CDKN2A-AS1Q9UH64 79 aa10.04□□□□□ -0.8
TRIM4-203ENST00000355947 POM121L12Q8N7R1 296 aa10.03□□□□□ -0.8
TRIM4-203ENST00000355947 CITED1Q99966 193 aa10.03□□□□□ -0.8
TRIM4-203ENST00000355947 A0A0B4J2C4 111 aa10.03□□□□□ -0.8
TRIM4-203ENST00000355947 KLLNB2CW77 178 aa10.03□□□□□ -0.8
TRIM4-203ENST00000355947 USMG5Q96IX5 58 aa10.03□□□□□ -0.8
TRIM4-203ENST00000355947 LINC01587Q99440 93 aa10.03□□□□□ -0.8
TRIM4-203ENST00000355947 ANKRD17O75179 2603 aaKnown RBP10.03□□□□□ -0.8
TRIM4-203ENST00000355947 TRBV7-9A0A0J9YWB2 115 aa10.03□□□□□ -0.8
TRIM4-203ENST00000355947 UBE2E2Q96LR5 201 aa10.03□□□□□ -0.8
TRIM4-203ENST00000355947 Q9H8V8 135 aa10.03□□□□□ -0.8
TRIM4-203ENST00000355947 CHD6Q8TD26 2715 aa10.03□□□□□ -0.8
TRIM4-203ENST00000355947 C19orf84I3L1E1 186 aa10.02□□□□□ -0.81
TRIM4-203ENST00000355947 IGHV4-59P01825 116 aa10.02□□□□□ -0.81
TRIM4-203ENST00000355947 LGALS9O00182 355 aa10.02□□□□□ -0.81
TRIM4-203ENST00000355947 NXPH4O95158 308 aa10.02□□□□□ -0.81
TRIM4-203ENST00000355947 RHOHQ15669 191 aa10.01□□□□□ -0.81
TRIM4-203ENST00000355947 MRPL23Q16540 153 aaKnown RBP10.01□□□□□ -0.81
TRIM4-203ENST00000355947 DCANP1Q8TF63 244 aa10.01□□□□□ -0.81
TRIM4-203ENST00000355947 C11orf68Q9H3H3 251 aaKnown RBP10.01□□□□□ -0.81
TRIM4-203ENST00000355947 Q9HAA7 133 aa10.01□□□□□ -0.81
TRIM4-203ENST00000355947 RPL32P62910 135 aaKnown RBP10.01□□□□□ -0.81
TRIM4-203ENST00000355947 CFHR3Q02985 330 aa10.01□□□□□ -0.81
TRIM4-203ENST00000355947 GAGE2AQ6NT46 116 aa10.01□□□□□ -0.81
TRIM4-203ENST00000355947 APRG1Q8IVJ8 170 aa10.01□□□□□ -0.81
TRIM4-203ENST00000355947 SVIPQ8NHG7 77 aa10.01□□□□□ -0.81
TRIM4-203ENST00000355947 LINC00467Q9BRT7 94 aa10.01□□□□□ -0.81
TRIM4-203ENST00000355947 FBN2P35556 2912 aa10.01□□□□□ -0.81
TRIM4-203ENST00000355947 A0A0J9YX75 114 aa10□□□□□ -0.81
TRIM4-203ENST00000355947 MED14OSP0DP75 135 aa10□□□□□ -0.81
TRIM4-203ENST00000355947 PRIMA1Q86XR5 153 aa10□□□□□ -0.81
TRIM4-203ENST00000355947 CIRBPQ14011 172 aaKnown RBP10□□□□□ -0.81
TRIM4-203ENST00000355947 Q6ZSN1 163 aa10□□□□□ -0.81
TRIM4-203ENST00000355947 IGHV1-58A0A0C4DH39 117 aa10□□□□□ -0.81
TRIM4-203ENST00000355947 SBSPONQ8IVN8 264 aa10□□□□□ -0.81
TRIM4-203ENST00000355947 XCL2Q9UBD3 114 aa10□□□□□ -0.81
TRIM4-203ENST00000355947 NBL1P41271 181 aa9.99□□□□□ -0.81
TRIM4-203ENST00000355947 ACANP16112 2415 aa9.99□□□□□ -0.81
TRIM4-203ENST00000355947 HIVEP2P31629 2446 aa9.99□□□□□ -0.81
TRIM4-203ENST00000355947 IGHG2P01859 326 aa9.98□□□□□ -0.81
TRIM4-203ENST00000355947 NSUN5P1Q3KNT7 163 aa9.98□□□□□ -0.81
TRIM4-203ENST00000355947 NOTCH2Q04721 2471 aa9.98□□□□□ -0.81
TRIM4-203ENST00000355947 IGHV4-30-2A0A087WSY4 118 aa9.97□□□□□ -0.81
TRIM4-203ENST00000355947 MIAQ16674 131 aa9.97□□□□□ -0.81
TRIM4-203ENST00000355947 PIK3CD-AS1Q5SR53 167 aa9.97□□□□□ -0.81
TRIM4-203ENST00000355947 PIMREGQ9BSJ6 248 aa9.97□□□□□ -0.81
TRIM4-203ENST00000355947 TRBV30A0A0K0K1B3 111 aa9.97□□□□□ -0.81
TRIM4-203ENST00000355947 RNASE1P07998 156 aaKnown RBP9.97□□□□□ -0.81
TRIM4-203ENST00000355947 C9orf153Q5TBE3 101 aa9.97□□□□□ -0.81
TRIM4-203ENST00000355947 VSIG2Q96IQ7 327 aa9.97□□□□□ -0.81
TRIM4-203ENST00000355947 AVPP01185 164 aa9.97□□□□□ -0.81
TRIM4-203ENST00000355947 SLURP1P55000 103 aa9.97□□□□□ -0.81
TRIM4-203ENST00000355947 FBXL19-AS1Q494R0 122 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms