RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 HIST2H2BDQ6DRA6 164 aa16.16■□□□□ 0.18
NKX2-1-201ENST00000354822 C16orf95Q9H693 158 aa16.16■□□□□ 0.18
NKX2-1-201ENST00000354822 Q6ZSN1 163 aa16.15■□□□□ 0.18
NKX2-1-201ENST00000354822 F8W1H4 67 aa16.14■□□□□ 0.17
NKX2-1-201ENST00000354822 C11orf44Q8N8P7 122 aa16.14■□□□□ 0.17
NKX2-1-201ENST00000354822 VPS25Q9BRG1 176 aa16.14■□□□□ 0.17
NKX2-1-201ENST00000354822 SPANXA1Q9NS26 97 aa16.14■□□□□ 0.17
NKX2-1-201ENST00000354822 XCL2Q9UBD3 114 aa16.14■□□□□ 0.17
NKX2-1-201ENST00000354822 A0A0J9YXV3 536 aa16.14■□□□□ 0.17
NKX2-1-201ENST00000354822 MRPL16Q9NX20 251 aaKnown RBP16.14■□□□□ 0.17
NKX2-1-201ENST00000354822 PDZD2O15018 2839 aa16.13■□□□□ 0.17
NKX2-1-201ENST00000354822 RNASE1P07998 156 aaKnown RBP16.13■□□□□ 0.17
NKX2-1-201ENST00000354822 MRPS36P82909 103 aaKnown RBP16.13■□□□□ 0.17
NKX2-1-201ENST00000354822 CITED2Q99967 270 aaPredicted RBP16.13■□□□□ 0.17
NKX2-1-201ENST00000354822 ZNF469Q96JG9 3925 aaPredicted RBP16.13■□□□□ 0.17
NKX2-1-201ENST00000354822 CHCHD7Q9BUK0 85 aa16.12■□□□□ 0.17
NKX2-1-201ENST00000354822 IGHV3-30P01768 117 aa16.11■□□□□ 0.17
NKX2-1-201ENST00000354822 IGHV3-30-5P0DP03 117 aa16.11■□□□□ 0.17
NKX2-1-201ENST00000354822 PGPEP1Q9NXJ5 209 aa16.11■□□□□ 0.17
NKX2-1-201ENST00000354822 NACAE9PAV3 2078 aa16.11■□□□□ 0.17
NKX2-1-201ENST00000354822 SAP30O75446 220 aa16.11■□□□□ 0.17
NKX2-1-201ENST00000354822 C1orf158Q8N1D5 194 aa16.11■□□□□ 0.17
NKX2-1-201ENST00000354822 LINC01006Q8NI28 216 aa16.11■□□□□ 0.17
NKX2-1-201ENST00000354822 FAM104AQ969W3 186 aa16.11■□□□□ 0.17
NKX2-1-201ENST00000354822 G3V4G9 280 aa16.1■□□□□ 0.17
NKX2-1-201ENST00000354822 COTL1Q14019 142 aa16.1■□□□□ 0.17
NKX2-1-201ENST00000354822 AZU1P20160 251 aa16.1■□□□□ 0.17
NKX2-1-201ENST00000354822 UBE2D4Q9Y2X8 147 aa16.1■□□□□ 0.17
NKX2-1-201ENST00000354822 IL17DQ8TAD2 202 aa16.09■□□□□ 0.17
NKX2-1-201ENST00000354822 Q9UF83 564 aa16.09■□□□□ 0.17
NKX2-1-201ENST00000354822 TLN2Q9Y4G6 2542 aa16.08■□□□□ 0.17
NKX2-1-201ENST00000354822 FLNAP21333 2647 aaKnown RBP16.08■□□□□ 0.17
NKX2-1-201ENST00000354822 AKAP9Q99996 3911 aa16.08■□□□□ 0.17
NKX2-1-201ENST00000354822 NBPF19A0A087WUL8 3843 aa16.08■□□□□ 0.16
NKX2-1-201ENST00000354822 CCDC168Q8NDH2 2452 aa16.07■□□□□ 0.16
NKX2-1-201ENST00000354822 H3BMG7 143 aa16.07■□□□□ 0.16
NKX2-1-201ENST00000354822 NDUFA11Q86Y39 141 aa16.07■□□□□ 0.16
NKX2-1-201ENST00000354822 TINCRA0A1B0GVN0 87 aa16.07■□□□□ 0.16
NKX2-1-201ENST00000354822 PCP4P48539 62 aa16.07■□□□□ 0.16
NKX2-1-201ENST00000354822 IGHV3OR16-12A0A075B7B8 117 aa16.06■□□□□ 0.16
NKX2-1-201ENST00000354822 APOMO95445 188 aa16.06■□□□□ 0.16
NKX2-1-201ENST00000354822 GAGE13Q4V321 117 aa16.06■□□□□ 0.16
NKX2-1-201ENST00000354822 LYRM7Q5U5X0 104 aa16.06■□□□□ 0.16
NKX2-1-201ENST00000354822 CEMP1Q6PRD7 247 aaPredicted RBP16.06■□□□□ 0.16
NKX2-1-201ENST00000354822 FAM110AQ9BQ89 295 aa16.06■□□□□ 0.16
NKX2-1-201ENST00000354822 TIMM21Q9BVV7 248 aa16.06■□□□□ 0.16
NKX2-1-201ENST00000354822 SONP18583 2426 aaKnown RBP16.05■□□□□ 0.16
NKX2-1-201ENST00000354822 ZNF418Q8TF45 676 aaPredicted RBP16.05■□□□□ 0.16
NKX2-1-201ENST00000354822 TMEM263Q8WUH6 116 aaKnown RBP16.05■□□□□ 0.16
NKX2-1-201ENST00000354822 TRGV1A0A0A0MS02 117 aa16.04■□□□□ 0.16
NKX2-1-201ENST00000354822 TMEM238C9JI98 176 aa16.04■□□□□ 0.16
NKX2-1-201ENST00000354822 TSPAN13O95857 204 aa16.04■□□□□ 0.16
NKX2-1-201ENST00000354822 IGHV3-30-3P0DP02 117 aa16.04■□□□□ 0.16
NKX2-1-201ENST00000354822 RPL24P83731 157 aaKnown RBP16.04■□□□□ 0.16
NKX2-1-201ENST00000354822 IGHV3-64A0A075B6Q5 118 aa16.03■□□□□ 0.16
NKX2-1-201ENST00000354822 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.03■□□□□ 0.16
NKX2-1-201ENST00000354822 TRBV10-1A0A0K0K1A3 114 aa16.03■□□□□ 0.16
NKX2-1-201ENST00000354822 IGKV2-29A2NJV5 120 aaPredicted RBP16.03■□□□□ 0.16
NKX2-1-201ENST00000354822 CFC1BP0CG36 223 aa16.03■□□□□ 0.16
NKX2-1-201ENST00000354822 CFC1P0CG37 223 aa16.03■□□□□ 0.16
NKX2-1-201ENST00000354822 IGHV1-58A0A0C4DH39 117 aa16.03■□□□□ 0.16
NKX2-1-201ENST00000354822 IGHV3-38A0A0C4DH36 116 aa16.02■□□□□ 0.16
NKX2-1-201ENST00000354822 HILS1P60008 231 aa16.01■□□□□ 0.15
NKX2-1-201ENST00000354822 UBE2D3P61077 147 aa16.01■□□□□ 0.15
NKX2-1-201ENST00000354822 UBE2D2P62837 147 aa16.01■□□□□ 0.15
NKX2-1-201ENST00000354822 WFDC2Q14508 124 aa16.01■□□□□ 0.15
NKX2-1-201ENST00000354822 C10orf126Q8N4M7 172 aa16.01■□□□□ 0.15
NKX2-1-201ENST00000354822 PRO1854Q9UHT4 67 aa16.01■□□□□ 0.15
NKX2-1-201ENST00000354822 TRAV4A0A0B4J268 109 aa16■□□□□ 0.15
NKX2-1-201ENST00000354822 IGLV1-51P01701 117 aa16■□□□□ 0.15
NKX2-1-201ENST00000354822 HELZ2Q9BYK8 2649 aaKnown RBP16■□□□□ 0.15
NKX2-1-201ENST00000354822 A0A0J9YXY3 114 aa16■□□□□ 0.15
NKX2-1-201ENST00000354822 RPL36AP83881 106 aaKnown RBP16■□□□□ 0.15
NKX2-1-201ENST00000354822 RPL36ALQ969Q0 106 aaKnown RBP16■□□□□ 0.15
NKX2-1-201ENST00000354822 DAZ2Q13117 558 aaKnown RBP15.99■□□□□ 0.15
NKX2-1-201ENST00000354822 RNASE13Q5GAN3 156 aaKnown RBP15.99■□□□□ 0.15
NKX2-1-201ENST00000354822 DGAT2L7PQ6IED9 249 aa15.99■□□□□ 0.15
NKX2-1-201ENST00000354822 Q6ZUT4 128 aa15.99■□□□□ 0.15
NKX2-1-201ENST00000354822 PRO0461Q9UI25 63 aa15.99■□□□□ 0.15
NKX2-1-201ENST00000354822 LOC107984156A0A0G2JMH3 177 aa15.99■□□□□ 0.15
NKX2-1-201ENST00000354822 TEX48A0A1B0GUV7 120 aa15.99■□□□□ 0.15
NKX2-1-201ENST00000354822 ARL17AQ8IVW1 177 aa15.99■□□□□ 0.15
NKX2-1-201ENST00000354822 VSIG2Q96IQ7 327 aa15.99■□□□□ 0.15
NKX2-1-201ENST00000354822 GEMIN7Q9H840 131 aaKnown RBP15.99■□□□□ 0.15
NKX2-1-201ENST00000354822 K7EQD1 137 aa15.98■□□□□ 0.15
NKX2-1-201ENST00000354822 TIRAPP58753 221 aa15.98■□□□□ 0.15
NKX2-1-201ENST00000354822 DAZ4Q86SG3 579 aaKnown RBP15.98■□□□□ 0.15
NKX2-1-201ENST00000354822 DAZ3Q9NR90 486 aaKnown RBP15.98■□□□□ 0.15
NKX2-1-201ENST00000354822 NDUFA7O95182 113 aa15.97■□□□□ 0.15
NKX2-1-201ENST00000354822 C1QTNF4Q9BXJ3 329 aa15.97■□□□□ 0.15
NKX2-1-201ENST00000354822 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.97■□□□□ 0.15
NKX2-1-201ENST00000354822 A4D1N5 150 aa15.97■□□□□ 0.15
NKX2-1-201ENST00000354822 J3QR89 54 aa15.97■□□□□ 0.15
NKX2-1-201ENST00000354822 Q6ZTI0 123 aa15.97■□□□□ 0.15
NKX2-1-201ENST00000354822 TRBV20-1A0A075B6N2 111 aa15.96■□□□□ 0.15
NKX2-1-201ENST00000354822 MUSTN1Q8IVN3 82 aa15.96■□□□□ 0.15
NKX2-1-201ENST00000354822 C16orf74Q96GX8 76 aa15.96■□□□□ 0.15
NKX2-1-201ENST00000354822 TRAV8-3A0A0A6YYJ7 113 aa15.96■□□□□ 0.14
NKX2-1-201ENST00000354822 A0A0B4J2C4 111 aa15.96■□□□□ 0.14
NKX2-1-201ENST00000354822 CIDEAO60543 219 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms