RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 C9JAW5 83 aa17.87■□□□□ 0.45
CPNE1-202ENST00000352393 H7C2G1 150 aa17.87■□□□□ 0.45
CPNE1-202ENST00000352393 FSHBP01225 129 aa17.87■□□□□ 0.45
CPNE1-202ENST00000352393 DUX3Q96PT4 197 aa17.87■□□□□ 0.45
CPNE1-202ENST00000352393 SPINK8P0C7L1 97 aa17.86■□□□□ 0.45
CPNE1-202ENST00000352393 SLURP1P55000 103 aa17.86■□□□□ 0.45
CPNE1-202ENST00000352393 Q6YL49 198 aa17.86■□□□□ 0.45
CPNE1-202ENST00000352393 SPANXA1Q9NS26 97 aa17.86■□□□□ 0.45
CPNE1-202ENST00000352393 Q9UF83 564 aa17.86■□□□□ 0.45
CPNE1-202ENST00000352393 ZNF415Q09FC8 603 aa17.86■□□□□ 0.45
CPNE1-202ENST00000352393 Q6ZSN1 163 aa17.86■□□□□ 0.45
CPNE1-202ENST00000352393 TINCRA0A1B0GVN0 87 aa17.85■□□□□ 0.45
CPNE1-202ENST00000352393 PRM2P04554 102 aa17.85■□□□□ 0.45
CPNE1-202ENST00000352393 PRRC2AP48634 2157 aaKnown RBP17.85■□□□□ 0.45
CPNE1-202ENST00000352393 RNASE13Q5GAN3 156 aaKnown RBP17.85■□□□□ 0.45
CPNE1-202ENST00000352393 UBE2D4Q9Y2X8 147 aa17.85■□□□□ 0.45
CPNE1-202ENST00000352393 C18orf65Q6ZTR6 163 aa17.84■□□□□ 0.45
CPNE1-202ENST00000352393 SPANXDQ9BXN6 97 aa17.84■□□□□ 0.45
CPNE1-202ENST00000352393 SPANXCQ9NY87 97 aa17.84■□□□□ 0.45
CPNE1-202ENST00000352393 USP9XQ93008 2570 aaPredicted RBP17.84■□□□□ 0.45
CPNE1-202ENST00000352393 CKS1BP61024 79 aa17.84■□□□□ 0.45
CPNE1-202ENST00000352393 DEFB136Q30KP8 78 aa17.84■□□□□ 0.45
CPNE1-202ENST00000352393 Q1RN00 199 aa17.83■□□□□ 0.45
CPNE1-202ENST00000352393 MAPK1IP1LQ8NDC0 245 aa17.83■□□□□ 0.45
CPNE1-202ENST00000352393 VSIG2Q96IQ7 327 aa17.83■□□□□ 0.45
CPNE1-202ENST00000352393 FLNCQ14315 2725 aa17.83■□□□□ 0.44
CPNE1-202ENST00000352393 NDUFA12Q9UI09 145 aa17.83■□□□□ 0.44
CPNE1-202ENST00000352393 TRBV30A0A0K0K1B3 111 aa17.82■□□□□ 0.44
CPNE1-202ENST00000352393 ATXN8Q156A1 80 aa17.82■□□□□ 0.44
CPNE1-202ENST00000352393 LINC01600Q96MT4 127 aa17.82■□□□□ 0.44
CPNE1-202ENST00000352393 ADAMTSL4-AS1Q5T5F5 129 aa17.81■□□□□ 0.44
CPNE1-202ENST00000352393 C11orf72Q8NBR9 251 aa17.81■□□□□ 0.44
CPNE1-202ENST00000352393 TRIAP1O43715 76 aa17.8■□□□□ 0.44
CPNE1-202ENST00000352393 LINC01620Q4KN68 170 aa17.8■□□□□ 0.44
CPNE1-202ENST00000352393 TMEM61Q8N0U2 210 aa17.8■□□□□ 0.44
CPNE1-202ENST00000352393 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.8■□□□□ 0.44
CPNE1-202ENST00000352393 IGKV2-29A2NJV5 120 aaPredicted RBP17.8■□□□□ 0.44
CPNE1-202ENST00000352393 MIAQ16674 131 aa17.8■□□□□ 0.44
CPNE1-202ENST00000352393 LINC00467Q9BRT7 94 aa17.8■□□□□ 0.44
CPNE1-202ENST00000352393 IGSF10Q6WRI0 2623 aa17.79■□□□□ 0.44
CPNE1-202ENST00000352393 BEX4Q9NWD9 120 aaPredicted RBP17.79■□□□□ 0.44
CPNE1-202ENST00000352393 IGHV3-53P01767 116 aa17.78■□□□□ 0.44
CPNE1-202ENST00000352393 MAP6D1Q9H9H5 199 aa17.78■□□□□ 0.44
CPNE1-202ENST00000352393 TMEM262E9PQX1 116 aa17.78■□□□□ 0.44
CPNE1-202ENST00000352393 DNAJC30Q96LL9 226 aa17.78■□□□□ 0.44
CPNE1-202ENST00000352393 ZFAND6Q6FIF0 208 aa17.77■□□□□ 0.44
CPNE1-202ENST00000352393 A8MZ25 164 aa17.77■□□□□ 0.43
CPNE1-202ENST00000352393 BEAN1Q3B7T3 259 aa17.77■□□□□ 0.43
CPNE1-202ENST00000352393 PRSS2P07478 247 aa17.76■□□□□ 0.43
CPNE1-202ENST00000352393 Q8N2B8 174 aa17.75■□□□□ 0.43
CPNE1-202ENST00000352393 PEMTQ9UBM1 199 aa17.75■□□□□ 0.43
CPNE1-202ENST00000352393 ANKRD17O75179 2603 aaKnown RBP17.75■□□□□ 0.43
CPNE1-202ENST00000352393 CREBBPQ92793 2442 aa17.75■□□□□ 0.43
CPNE1-202ENST00000352393 ICOSQ9Y6W8 199 aa17.75■□□□□ 0.43
CPNE1-202ENST00000352393 RNF183Q96D59 192 aa17.74■□□□□ 0.43
CPNE1-202ENST00000352393 CR1P17927 2039 aa17.74■□□□□ 0.43
CPNE1-202ENST00000352393 ZANQ9Y493 2812 aa17.74■□□□□ 0.43
CPNE1-202ENST00000352393 IGHV3-38A0A0C4DH36 116 aa17.74■□□□□ 0.43
CPNE1-202ENST00000352393 RS1O15537 224 aa17.74■□□□□ 0.43
CPNE1-202ENST00000352393 IGHV4-31P0DP07 118 aa17.74■□□□□ 0.43
CPNE1-202ENST00000352393 NTN5Q8WTR8 489 aaPredicted RBP17.74■□□□□ 0.43
CPNE1-202ENST00000352393 LINC01587Q99440 93 aa17.74■□□□□ 0.43
CPNE1-202ENST00000352393 IGLV5-45A0A087WSX0 123 aa17.73■□□□□ 0.43
CPNE1-202ENST00000352393 TRBV10-2A0A0K0K1G8 114 aa17.73■□□□□ 0.43
CPNE1-202ENST00000352393 TIMM17BO60830 172 aa17.73■□□□□ 0.43
CPNE1-202ENST00000352393 GEMIN7Q9H840 131 aaKnown RBP17.73■□□□□ 0.43
CPNE1-202ENST00000352393 USP9YO00507 2555 aaPredicted RBP17.73■□□□□ 0.43
CPNE1-202ENST00000352393 INSP01308 110 aa17.72■□□□□ 0.43
CPNE1-202ENST00000352393 C4orf3Q8WVX3 66 aa17.72■□□□□ 0.43
CPNE1-202ENST00000352393 RPL13AP40429 203 aaKnown RBP17.72■□□□□ 0.43
CPNE1-202ENST00000352393 UTP20O75691 2785 aaKnown RBP17.71■□□□□ 0.43
CPNE1-202ENST00000352393 YAE1D1Q9NRH1 226 aa17.71■□□□□ 0.42
CPNE1-202ENST00000352393 TIRAPP58753 221 aa17.7■□□□□ 0.42
CPNE1-202ENST00000352393 CDKN2A-AS1Q9UH64 79 aa17.7■□□□□ 0.42
CPNE1-202ENST00000352393 ACACBO00763 2458 aa17.7■□□□□ 0.42
CPNE1-202ENST00000352393 DYNLRB2Q8TF09 96 aa17.69■□□□□ 0.42
CPNE1-202ENST00000352393 NDUFA1O15239 70 aa17.69■□□□□ 0.42
CPNE1-202ENST00000352393 NPC2P61916 151 aa17.69■□□□□ 0.42
CPNE1-202ENST00000352393 CSMD2Q7Z408 3487 aa17.69■□□□□ 0.42
CPNE1-202ENST00000352393 Q6ZSV7 163 aa17.68■□□□□ 0.42
CPNE1-202ENST00000352393 CITED1Q99966 193 aa17.68■□□□□ 0.42
CPNE1-202ENST00000352393 MXRA5Q9NR99 2828 aa17.68■□□□□ 0.42
CPNE1-202ENST00000352393 IFITM1P13164 125 aa17.68■□□□□ 0.42
CPNE1-202ENST00000352393 DEFB114Q30KQ6 69 aa17.68■□□□□ 0.42
CPNE1-202ENST00000352393 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.67■□□□□ 0.42
CPNE1-202ENST00000352393 TMEM101Q96IK0 257 aa17.66■□□□□ 0.42
CPNE1-202ENST00000352393 FBN2P35556 2912 aa17.65■□□□□ 0.42
CPNE1-202ENST00000352393 TEX49A0A1B0GTD5 131 aa17.65■□□□□ 0.42
CPNE1-202ENST00000352393 CLUHP3Q96NS8 147 aa17.65■□□□□ 0.42
CPNE1-202ENST00000352393 COX6CP09669 75 aa17.65■□□□□ 0.42
CPNE1-202ENST00000352393 IGHV3OR16-12A0A075B7B8 117 aa17.64■□□□□ 0.41
CPNE1-202ENST00000352393 H7C423 109 aa17.64■□□□□ 0.41
CPNE1-202ENST00000352393 IL17DQ8TAD2 202 aa17.64■□□□□ 0.41
CPNE1-202ENST00000352393 UBE2WQ96B02 151 aa17.64■□□□□ 0.41
CPNE1-202ENST00000352393 H3BT86 120 aa17.63■□□□□ 0.41
CPNE1-202ENST00000352393 PRB1P04280 392 aa17.63■□□□□ 0.41
CPNE1-202ENST00000352393 KHDC1LQ5JSQ8 128 aa17.63■□□□□ 0.41
CPNE1-202ENST00000352393 IGLV5-39A0A0G2JS06 123 aa17.63■□□□□ 0.41
CPNE1-202ENST00000352393 COX6A2Q02221 97 aa17.63■□□□□ 0.41
CPNE1-202ENST00000352393 C2orf82Q6UX34 121 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms