RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 K7EN84 100 aa11.58□□□□□ -0.56
CKLF-202ENST00000345436 CEBPGP53567 150 aa11.58□□□□□ -0.56
CKLF-202ENST00000345436 FAM231DQ6ZW35 169 aa11.58□□□□□ -0.56
CKLF-202ENST00000345436 EIF5A2Q9GZV4 153 aaKnown RBP11.58□□□□□ -0.56
CKLF-202ENST00000345436 AP5S1Q9NUS5 200 aa11.58□□□□□ -0.56
CKLF-202ENST00000345436 DMBT1Q9UGM3 2413 aaPredicted RBP11.57□□□□□ -0.56
CKLF-202ENST00000345436 hCG_2014768A0A024R1R8 64 aa11.57□□□□□ -0.56
CKLF-202ENST00000345436 NDUFS6O75380 124 aaKnown RBP11.57□□□□□ -0.56
CKLF-202ENST00000345436 NCR2O95944 276 aa11.57□□□□□ -0.56
CKLF-202ENST00000345436 AMMECR1LQ6DCA0 310 aa11.57□□□□□ -0.56
CKLF-202ENST00000345436 CFAP161Q6P656 301 aa11.57□□□□□ -0.56
CKLF-202ENST00000345436 C20orf203Q8NBC4 194 aa11.57□□□□□ -0.56
CKLF-202ENST00000345436 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.56□□□□□ -0.56
CKLF-202ENST00000345436 PRSS1P07477 247 aa11.56□□□□□ -0.56
CKLF-202ENST00000345436 CT83Q5H943 113 aa11.56□□□□□ -0.56
CKLF-202ENST00000345436 C9orf163Q8N9P6 203 aa11.56□□□□□ -0.56
CKLF-202ENST00000345436 GATD1Q8NB37 220 aa11.56□□□□□ -0.56
CKLF-202ENST00000345436 LYPD6BQ8NI32 183 aa11.56□□□□□ -0.56
CKLF-202ENST00000345436 CIRBP-AS1Q8TBR5 109 aa11.56□□□□□ -0.56
CKLF-202ENST00000345436 FAM210AQ96ND0 272 aa11.56□□□□□ -0.56
CKLF-202ENST00000345436 IGLV10-54A0A075B6I4 117 aa11.55□□□□□ -0.56
CKLF-202ENST00000345436 H7C423 109 aa11.55□□□□□ -0.56
CKLF-202ENST00000345436 VPS13BQ7Z7G8 4022 aa11.55□□□□□ -0.56
CKLF-202ENST00000345436 hDV102S1A0JD36 115 aa11.54□□□□□ -0.56
CKLF-202ENST00000345436 GTSF1Q8WW33 167 aa11.54□□□□□ -0.56
CKLF-202ENST00000345436 SMIM7Q9BQ49 75 aa11.54□□□□□ -0.56
CKLF-202ENST00000345436 IGLV4-60A0A075B6I1 120 aa11.53□□□□□ -0.56
CKLF-202ENST00000345436 APCSP02743 223 aa11.53□□□□□ -0.56
CKLF-202ENST00000345436 PMCHP20382 165 aa11.53□□□□□ -0.56
CKLF-202ENST00000345436 FOXA3P55318 350 aaPredicted RBP11.53□□□□□ -0.56
CKLF-202ENST00000345436 KRTAP26-1Q6PEX3 210 aa11.53□□□□□ -0.56
CKLF-202ENST00000345436 TRAV26-2A0A0B4J265 109 aa11.52□□□□□ -0.57
CKLF-202ENST00000345436 FAM231BA6NCW3 169 aa11.52□□□□□ -0.57
CKLF-202ENST00000345436 ZNF727A8MUV8 499 aa11.52□□□□□ -0.57
CKLF-202ENST00000345436 DPH3Q96FX2 82 aa11.52□□□□□ -0.57
CKLF-202ENST00000345436 BTF3L4Q96K17 158 aa11.52□□□□□ -0.57
CKLF-202ENST00000345436 GFRA4Q9GZZ7 299 aa11.52□□□□□ -0.57
CKLF-202ENST00000345436 A0A1B0GUT8 65 aa11.51□□□□□ -0.57
CKLF-202ENST00000345436 I3L3M4 83 aa11.51□□□□□ -0.57
CKLF-202ENST00000345436 CNBPP62633 177 aaKnown RBP11.51□□□□□ -0.57
CKLF-202ENST00000345436 RNASEKQ6P5S7 137 aaKnown RBP11.51□□□□□ -0.57
CKLF-202ENST00000345436 TSKUQ8WUA8 353 aa11.51□□□□□ -0.57
CKLF-202ENST00000345436 TMEM101Q96IK0 257 aa11.51□□□□□ -0.57
CKLF-202ENST00000345436 FLG2Q5D862 2391 aaPredicted RBP11.51□□□□□ -0.57
CKLF-202ENST00000345436 IGHV3-64A0A075B6Q5 118 aa11.5□□□□□ -0.57
CKLF-202ENST00000345436 SDHAF1A6NFY7 115 aa11.5□□□□□ -0.57
CKLF-202ENST00000345436 ST20Q9HBF5 79 aa11.5□□□□□ -0.57
CKLF-202ENST00000345436 ZNF25P17030 456 aaPredicted RBP11.49□□□□□ -0.57
CKLF-202ENST00000345436 LINC01551Q86U37 167 aa11.49□□□□□ -0.57
CKLF-202ENST00000345436 RPL39LQ96EH5 51 aaKnown RBP11.49□□□□□ -0.57
CKLF-202ENST00000345436 OSTCQ9NRP0 149 aa11.49□□□□□ -0.57
CKLF-202ENST00000345436 IGKV3OR2-268A0A0C4DH90 116 aa11.48□□□□□ -0.57
CKLF-202ENST00000345436 TRBV6-5A0A0K0K1A5 114 aa11.48□□□□□ -0.57
CKLF-202ENST00000345436 HIGD1CA8MV81 97 aa11.48□□□□□ -0.57
CKLF-202ENST00000345436 KRTAP29-1A8MX34 341 aaPredicted RBP11.48□□□□□ -0.57
CKLF-202ENST00000345436 PPP1R17O96001 155 aa11.48□□□□□ -0.57
CKLF-202ENST00000345436 FAM74A3Q4VXF1 159 aa11.48□□□□□ -0.57
CKLF-202ENST00000345436 TMEM191AQ9H0A3 160 aa11.48□□□□□ -0.57
CKLF-202ENST00000345436 GAGE12HA6NDE8 117 aa11.47□□□□□ -0.57
CKLF-202ENST00000345436 FGF6P10767 208 aa11.47□□□□□ -0.57
CKLF-202ENST00000345436 RPL37AP61513 92 aaKnown RBP11.47□□□□□ -0.57
CKLF-202ENST00000345436 SMAGPQ0VAQ4 97 aa11.47□□□□□ -0.57
CKLF-202ENST00000345436 RIGQ13278 110 aa11.47□□□□□ -0.57
CKLF-202ENST00000345436 SDIM1Q6ZPB5 146 aa11.47□□□□□ -0.57
CKLF-202ENST00000345436 MRAP2Q96G30 205 aa11.47□□□□□ -0.57
CKLF-202ENST00000345436 TMEM241Q24JQ0 296 aa11.46□□□□□ -0.57
CKLF-202ENST00000345436 RNF185Q96GF1 192 aa11.46□□□□□ -0.57
CKLF-202ENST00000345436 DNAH8Q96JB1 4490 aa11.46□□□□□ -0.58
CKLF-202ENST00000345436 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.45□□□□□ -0.58
CKLF-202ENST00000345436 IGKV2-29A2NJV5 120 aaPredicted RBP11.45□□□□□ -0.58
CKLF-202ENST00000345436 SRP19P09132 144 aaKnown RBP11.45□□□□□ -0.58
CKLF-202ENST00000345436 OR5A1Q8NGJ0 315 aa11.45□□□□□ -0.58
CKLF-202ENST00000345436 CHCHD10Q8WYQ3 142 aaPredicted RBP11.44□□□□□ -0.58
CKLF-202ENST00000345436 PKIGQ9Y2B9 76 aa11.44□□□□□ -0.58
CKLF-202ENST00000345436 HERC1Q15751 4861 aa11.44□□□□□ -0.58
CKLF-202ENST00000345436 OXTP01178 125 aa11.43□□□□□ -0.58
CKLF-202ENST00000345436 RPS10P46783 165 aaKnown RBP11.43□□□□□ -0.58
CKLF-202ENST00000345436 PEA15Q15121 130 aa11.43□□□□□ -0.58
CKLF-202ENST00000345436 MYCBP2O75592 4640 aa11.42□□□□□ -0.58
CKLF-202ENST00000345436 VCYO14598 125 aa11.42□□□□□ -0.58
CKLF-202ENST00000345436 RAB4AP20338 218 aa11.42□□□□□ -0.58
CKLF-202ENST00000345436 SS18Q15532 418 aa11.42□□□□□ -0.58
CKLF-202ENST00000345436 NAT8BQ9UHF3 227 aa11.42□□□□□ -0.58
CKLF-202ENST00000345436 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.42□□□□□ -0.58
CKLF-202ENST00000345436 TRBV27A0A0K0K1C4 114 aa11.41□□□□□ -0.58
CKLF-202ENST00000345436 FCER1GP30273 86 aa11.41□□□□□ -0.58
CKLF-202ENST00000345436 SMDT1Q9H4I9 107 aa11.41□□□□□ -0.58
CKLF-202ENST00000345436 PPP1R2P9O14990 202 aa11.4□□□□□ -0.58
CKLF-202ENST00000345436 ESDP10768 282 aa11.4□□□□□ -0.58
CKLF-202ENST00000345436 KIR2DL4Q99706 377 aa11.4□□□□□ -0.58
CKLF-202ENST00000345436 NAT8Q9UHE5 227 aa11.4□□□□□ -0.58
CKLF-202ENST00000345436 A0A1B0GW15 77 aa11.39□□□□□ -0.59
CKLF-202ENST00000345436 C7orf77A4D0Y5 90 aa11.39□□□□□ -0.59
CKLF-202ENST00000345436 TSHBP01222 138 aa11.39□□□□□ -0.59
CKLF-202ENST00000345436 POLR2KP53803 58 aaKnown RBP11.39□□□□□ -0.59
CKLF-202ENST00000345436 CIRBPQ14011 172 aaKnown RBP11.39□□□□□ -0.59
CKLF-202ENST00000345436 MRPL52Q86TS9 123 aaKnown RBP11.39□□□□□ -0.59
CKLF-202ENST00000345436 AMN1Q8IY45 258 aa11.39□□□□□ -0.59
CKLF-202ENST00000345436 NUP35Q8NFH5 326 aa11.39□□□□□ -0.59
CKLF-202ENST00000345436 ISOC2Q96AB3 205 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms