RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 C10orf126Q8N4M7 172 aa8.12□□□□□ -1.11
SPTLC1-202ENST00000337841 TMEM70Q9BUB7 260 aa8.12□□□□□ -1.11
SPTLC1-202ENST00000337841 LAMTOR2Q9Y2Q5 125 aa8.12□□□□□ -1.11
SPTLC1-202ENST00000337841 TRBV27A0A0K0K1C4 114 aa8.11□□□□□ -1.11
SPTLC1-202ENST00000337841 AMTP48728 403 aa8.11□□□□□ -1.11
SPTLC1-202ENST00000337841 Q6ZR54 194 aa8.11□□□□□ -1.11
SPTLC1-202ENST00000337841 NIT1Q86X76 327 aa8.11□□□□□ -1.11
SPTLC1-202ENST00000337841 KIR2DL4Q99706 377 aa8.11□□□□□ -1.11
SPTLC1-202ENST00000337841 TMEM243Q9BU79 118 aa8.11□□□□□ -1.11
SPTLC1-202ENST00000337841 TCAPO15273 167 aa8.1□□□□□ -1.11
SPTLC1-202ENST00000337841 NPYP01303 97 aa8.1□□□□□ -1.11
SPTLC1-202ENST00000337841 IGHV3-30P01768 117 aa8.1□□□□□ -1.11
SPTLC1-202ENST00000337841 IGHV3-33P01772 117 aa8.1□□□□□ -1.11
SPTLC1-202ENST00000337841 IGHV3-30-3P0DP02 117 aa8.1□□□□□ -1.11
SPTLC1-202ENST00000337841 IGHV3-30-5P0DP03 117 aa8.1□□□□□ -1.11
SPTLC1-202ENST00000337841 BTF3P20290 206 aaKnown RBP8.1□□□□□ -1.11
SPTLC1-202ENST00000337841 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
SPTLC1-202ENST00000337841 FCER1GP30273 86 aa8.1□□□□□ -1.11
SPTLC1-202ENST00000337841 RPL32P62910 135 aaKnown RBP8.1□□□□□ -1.11
SPTLC1-202ENST00000337841 FABP9Q0Z7S8 132 aa8.1□□□□□ -1.11
SPTLC1-202ENST00000337841 DEFB104AQ8WTQ1 72 aa8.1□□□□□ -1.11
SPTLC1-202ENST00000337841 CHCHD7Q9BUK0 85 aa8.1□□□□□ -1.11
SPTLC1-202ENST00000337841 UBE2L6O14933 153 aa8.09□□□□□ -1.11
SPTLC1-202ENST00000337841 GAGE6Q13070 117 aa8.09□□□□□ -1.11
SPTLC1-202ENST00000337841 C1orf134Q5TEV5 83 aa8.09□□□□□ -1.11
SPTLC1-202ENST00000337841 MRPL18Q9H0U6 180 aaKnown RBP8.09□□□□□ -1.11
SPTLC1-202ENST00000337841 MAP1LC3AQ9H492 121 aa8.09□□□□□ -1.11
SPTLC1-202ENST00000337841 TRAPPC1Q9Y5R8 145 aa8.09□□□□□ -1.11
SPTLC1-202ENST00000337841 PRSS47A8MTI9 375 aa8.08□□□□□ -1.12
SPTLC1-202ENST00000337841 H7C423 109 aa8.08□□□□□ -1.12
SPTLC1-202ENST00000337841 RAB5AP20339 215 aa8.08□□□□□ -1.12
SPTLC1-202ENST00000337841 KIAA1644Q3SXP7 199 aa8.08□□□□□ -1.12
SPTLC1-202ENST00000337841 CBLN2Q8IUK8 224 aa8.08□□□□□ -1.12
SPTLC1-202ENST00000337841 ALMS1Q8TCU4 4167 aa8.07□□□□□ -1.12
SPTLC1-202ENST00000337841 LOC389332A0A1B0GUA5 103 aa8.07□□□□□ -1.12
SPTLC1-202ENST00000337841 IBA57-AS1B1ANH7 110 aa8.07□□□□□ -1.12
SPTLC1-202ENST00000337841 TSHBP01222 138 aa8.07□□□□□ -1.12
SPTLC1-202ENST00000337841 NFE4Q86UQ8 179 aa8.07□□□□□ -1.12
SPTLC1-202ENST00000337841 C6orf223Q8N319 242 aa8.07□□□□□ -1.12
SPTLC1-202ENST00000337841 YPEL4Q96NS1 127 aa8.07□□□□□ -1.12
SPTLC1-202ENST00000337841 SMIM2Q9BVW6 85 aa8.07□□□□□ -1.12
SPTLC1-202ENST00000337841 S100A1P23297 94 aa8.06□□□□□ -1.12
SPTLC1-202ENST00000337841 RBX1P62877 108 aa8.06□□□□□ -1.12
SPTLC1-202ENST00000337841 SMAGPQ0VAQ4 97 aa8.06□□□□□ -1.12
SPTLC1-202ENST00000337841 AMMECR1LQ6DCA0 310 aa8.06□□□□□ -1.12
SPTLC1-202ENST00000337841 TMEM18Q96B42 140 aa8.06□□□□□ -1.12
SPTLC1-202ENST00000337841 KLK12Q9UKR0 248 aa8.06□□□□□ -1.12
SPTLC1-202ENST00000337841 TRAV8-3A0A0A6YYJ7 113 aa8.05□□□□□ -1.12
SPTLC1-202ENST00000337841 A0A1B0GUV1 79 aa8.05□□□□□ -1.12
SPTLC1-202ENST00000337841 ESDP10768 282 aa8.05□□□□□ -1.12
SPTLC1-202ENST00000337841 Q8N8P6 123 aa8.05□□□□□ -1.12
SPTLC1-202ENST00000337841 ALKBH7Q9BT30 221 aaPredicted RBP8.05□□□□□ -1.12
SPTLC1-202ENST00000337841 KRTAP1-5Q9BYS1 174 aa8.05□□□□□ -1.12
SPTLC1-202ENST00000337841 NXT2Q9NPJ8 142 aaKnown RBP8.05□□□□□ -1.12
SPTLC1-202ENST00000337841 VPS13DQ5THJ4 4388 aa8.05□□□□□ -1.12
SPTLC1-202ENST00000337841 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.04□□□□□ -1.12
SPTLC1-202ENST00000337841 IGKV2-29A2NJV5 120 aaPredicted RBP8.04□□□□□ -1.12
SPTLC1-202ENST00000337841 ANGP03950 147 aaKnown RBP8.04□□□□□ -1.12
SPTLC1-202ENST00000337841 Q0VG73 95 aa8.04□□□□□ -1.12
SPTLC1-202ENST00000337841 LAGE3Q14657 143 aa8.04□□□□□ -1.12
SPTLC1-202ENST00000337841 MPV17L2Q567V2 206 aa8.04□□□□□ -1.12
SPTLC1-202ENST00000337841 RNASEKQ6P5S7 137 aaKnown RBP8.04□□□□□ -1.12
SPTLC1-202ENST00000337841 Q8N3U1 123 aa8.04□□□□□ -1.12
SPTLC1-202ENST00000337841 Q8N976 141 aa8.04□□□□□ -1.12
SPTLC1-202ENST00000337841 PRSS3P2Q8NHM4 247 aa8.04□□□□□ -1.12
SPTLC1-202ENST00000337841 TMEM101Q96IK0 257 aa8.04□□□□□ -1.12
SPTLC1-202ENST00000337841 DNAH1Q9P2D7 4330 aa8.04□□□□□ -1.12
SPTLC1-202ENST00000337841 KMT2CQ8NEZ4 4911 aaKnown RBP8.03□□□□□ -1.12
SPTLC1-202ENST00000337841 K7EMI3 77 aa8.03□□□□□ -1.12
SPTLC1-202ENST00000337841 FGF6P10767 208 aa8.03□□□□□ -1.12
SPTLC1-202ENST00000337841 G0S2P27469 103 aa8.03□□□□□ -1.12
SPTLC1-202ENST00000337841 DGAT2L7PQ6IED9 249 aa8.03□□□□□ -1.12
SPTLC1-202ENST00000337841 LINC00336Q6ZUF6 198 aa8.03□□□□□ -1.12
SPTLC1-202ENST00000337841 UBE2WQ96B02 151 aa8.03□□□□□ -1.12
SPTLC1-202ENST00000337841 RMI2Q96E14 147 aa8.03□□□□□ -1.12
SPTLC1-202ENST00000337841 TM2D2Q9BX73 214 aa8.03□□□□□ -1.12
SPTLC1-202ENST00000337841 CRPP02741 224 aa8.02□□□□□ -1.13
SPTLC1-202ENST00000337841 ZNF25P17030 456 aaPredicted RBP8.02□□□□□ -1.13
SPTLC1-202ENST00000337841 C20orf203Q8NBC4 194 aa8.02□□□□□ -1.13
SPTLC1-202ENST00000337841 Q9HAA7 133 aa8.02□□□□□ -1.13
SPTLC1-202ENST00000337841 COX11Q9Y6N1 276 aa8.02□□□□□ -1.13
SPTLC1-202ENST00000337841 COLCA2A8K830 154 aa8.01□□□□□ -1.13
SPTLC1-202ENST00000337841 IFI27P40305 119 aaPredicted RBP8.01□□□□□ -1.13
SPTLC1-202ENST00000337841 ORMDL2Q53FV1 153 aa8.01□□□□□ -1.13
SPTLC1-202ENST00000337841 MRPL52Q86TS9 123 aaKnown RBP8.01□□□□□ -1.13
SPTLC1-202ENST00000337841 LINC00269Q8N2A0 174 aa8.01□□□□□ -1.13
SPTLC1-202ENST00000337841 OR5A1Q8NGJ0 315 aa8.01□□□□□ -1.13
SPTLC1-202ENST00000337841 SACSQ9NZJ4 4579 aa8.01□□□□□ -1.13
SPTLC1-202ENST00000337841 IGLV4-60A0A075B6I1 120 aa8□□□□□ -1.13
SPTLC1-202ENST00000337841 RTL8CO15255 209 aa8□□□□□ -1.13
SPTLC1-202ENST00000337841 PSCAO43653 123 aa8□□□□□ -1.13
SPTLC1-202ENST00000337841 ATP6V1G1O75348 118 aa8□□□□□ -1.13
SPTLC1-202ENST00000337841 SCO1O75880 301 aa8□□□□□ -1.13
SPTLC1-202ENST00000337841 MIAQ16674 131 aa8□□□□□ -1.13
SPTLC1-202ENST00000337841 ENHOQ6UWT2 76 aa8□□□□□ -1.13
SPTLC1-202ENST00000337841 FA2HQ7L5A8 372 aa8□□□□□ -1.13
SPTLC1-202ENST00000337841 TIMM21Q9BVV7 248 aa8□□□□□ -1.13
SPTLC1-202ENST00000337841 LYSTQ99698 3801 aa7.99□□□□□ -1.13
SPTLC1-202ENST00000337841 EREGO14944 169 aa7.99□□□□□ -1.13
SPTLC1-202ENST00000337841 RAB5BP61020 215 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms