RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 E9PLD3 99 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 SPINK13Q1W4C9 94 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 DAZ4Q86SG3 579 aaKnown RBP3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 DAZ3Q9NR90 486 aaKnown RBP3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 UBE2D4Q9Y2X8 147 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 PHLDA3Q9Y5J5 127 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 TSTD3H0UI37 97 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 RPL13AP40429 203 aaKnown RBP3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 GAGE1Q13065 139 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 FA2HQ7L5A8 372 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 IGHV3OR16-13A0A075B7E8 117 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 IGHV3-74A0A0B4J1X5 117 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 LOC107984156A0A0G2JMH3 177 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 IGLV5-39A0A0G2JS06 123 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 ZNF815PA8K554 130 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 F8VRH5 84 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 SPANXN1Q5VSR9 72 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 Q6ZSN1 163 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 ARL17AQ8IVW1 177 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 MEGF8Q7Z7M0 2845 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 CCL25O15444 150 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 ZNF25P17030 456 aaPredicted RBP3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 NUTF2P61970 127 aaKnown RBP3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 FHL2Q14192 279 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 LYRM7Q5U5X0 104 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 UBE2DNLQ8IWF7 75 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 CSTL1Q9H114 145 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 ALMS1Q8TCU4 4167 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 TINCRA0A1B0GVN0 87 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 EREGO14944 169 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 TIMM17BO60830 172 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 CD7P09564 240 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 MIFP14174 115 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 RNASEKQ6P5S7 137 aaKnown RBP3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 FAM19A2Q8N3H0 131 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 C11orf44Q8N8P7 122 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 RPL39LQ96EH5 51 aaKnown RBP3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 TM2D2Q9BX73 214 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 VPS13DQ5THJ4 4388 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 CST9LQ9H4G1 147 aa3.78□□□□□ -1.8
PRPF4B-201ENST00000337659 A0A1B0GUV1 79 aa3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 SMKR1H3BMG3 65 aa3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 AZU1P20160 251 aa3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 VAMP8Q9BV40 100 aa3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 IGLV4-3A0A075B6K6 122 aa3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 IGKV3OR2-268A0A0C4DH90 116 aa3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 A0A0J9YXY3 114 aa3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 K7EQD1 137 aa3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 A0A1W2PRX2 142 aa3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 STHQ8IWL8 128 aa3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 C14orf178Q8N769 122 aaPredicted RBP3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 PRSS3P2Q8NHM4 247 aa3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 PHLDA1Q8WV24 401 aaPredicted RBP3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 TMEM223A0PJW6 202 aa3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 F8WDY8 70 aa3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 PRB4P10163 310 aaPredicted RBP3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 SPATA45Q537H7 98 aa3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 C2orf66Q6UXQ4 117 aa3.77□□□□□ -1.81
PRPF4B-201ENST00000337659 SDHAF1A6NFY7 115 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 SNHG12Q9BXW3 62 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 NIPBLQ6KC79 2804 aaeCLIP3.76□□□□□ -1.813e-13■□□□□ 9
PRPF4B-201ENST00000337659 TRBV7-3A0A075B6L6 115 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 TRAV12-2A0A075B6T6 113 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 DPM2O94777 84 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 TSPAN13O95857 204 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 UBE2D1P51668 147 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 EMP1P54849 157 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 PMVKQ15126 192 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 C12orf54Q6X4T0 127 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 NTM-AS1Q6ZSK4 140 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 TMSB15BA0A087X1C1 80 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 IGKCP01834 107 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 LITAFQ99732 161 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 JPT2Q9H910 190 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 CYSLTR1Q9Y271 337 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 AGRNO00468 2067 aa3.76□□□□□ -1.81
PRPF4B-201ENST00000337659 F5H768 121 aa3.75□□□□□ -1.81
PRPF4B-201ENST00000337659 APOC4P55056 127 aa3.75□□□□□ -1.81
PRPF4B-201ENST00000337659 KRTAP10-11P60412 298 aa3.75□□□□□ -1.81
PRPF4B-201ENST00000337659 TM2D3Q9BRN9 247 aa3.75□□□□□ -1.81
PRPF4B-201ENST00000337659 NMUP48645 174 aa3.75□□□□□ -1.81
PRPF4B-201ENST00000337659 HERV-K104P63124 156 aa3.75□□□□□ -1.81
PRPF4B-201ENST00000337659 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.75□□□□□ -1.81
PRPF4B-201ENST00000337659 DUX3Q96PT4 197 aa3.75□□□□□ -1.81
PRPF4B-201ENST00000337659 FRAS1Q86XX4 4008 aa3.75□□□□□ -1.81
PRPF4B-201ENST00000337659 DNAH17Q9UFH2 4485 aa3.75□□□□□ -1.81
PRPF4B-201ENST00000337659 AMMECR1LQ6DCA0 310 aa3.75□□□□□ -1.81
PRPF4B-201ENST00000337659 SH2D6Q7Z4S9 175 aa3.75□□□□□ -1.81
PRPF4B-201ENST00000337659 SPANXDQ9BXN6 97 aa3.74□□□□□ -1.81
PRPF4B-201ENST00000337659 SPANXCQ9NY87 97 aa3.74□□□□□ -1.81
PRPF4B-201ENST00000337659 DKK2Q9UBU2 259 aa3.74□□□□□ -1.81
PRPF4B-201ENST00000337659 TMEM262E9PQX1 116 aa3.74□□□□□ -1.81
PRPF4B-201ENST00000337659 LEPROTO15243 131 aa3.74□□□□□ -1.81
PRPF4B-201ENST00000337659 MUC21Q5SSG8 566 aa3.74□□□□□ -1.81
PRPF4B-201ENST00000337659 ZNRF2Q8NHG8 242 aa3.74□□□□□ -1.81
PRPF4B-201ENST00000337659 SEC11AP67812 179 aa3.74□□□□□ -1.81
PRPF4B-201ENST00000337659 SMAGPQ0VAQ4 97 aa3.74□□□□□ -1.81
PRPF4B-201ENST00000337659 LYSTQ99698 3801 aa3.74□□□□□ -1.81
PRPF4B-201ENST00000337659 SCGB1D1O95968 90 aa3.73□□□□□ -1.81
PRPF4B-201ENST00000337659 KRTDAPP60985 99 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms