RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CFC1BP0CG36 223 aa12.29□□□□□ -0.44
CDC42EP4-201ENST00000335793 CFC1P0CG37 223 aa12.29□□□□□ -0.44
CDC42EP4-201ENST00000335793 B4DSR2 109 aa12.29□□□□□ -0.44
CDC42EP4-201ENST00000335793 PRORYQ9H606 182 aa12.29□□□□□ -0.44
CDC42EP4-201ENST00000335793 KLLNB2CW77 178 aa12.28□□□□□ -0.44
CDC42EP4-201ENST00000335793 RNF223E7ERA6 249 aa12.28□□□□□ -0.44
CDC42EP4-201ENST00000335793 TSHBP01222 138 aa12.28□□□□□ -0.44
CDC42EP4-201ENST00000335793 DEFB112Q30KQ8 113 aa12.28□□□□□ -0.44
CDC42EP4-201ENST00000335793 POLR2KP53803 58 aaKnown RBP12.28□□□□□ -0.44
CDC42EP4-201ENST00000335793 DCANP1Q8TF63 244 aa12.28□□□□□ -0.44
CDC42EP4-201ENST00000335793 DNAJC30Q96LL9 226 aa12.28□□□□□ -0.44
CDC42EP4-201ENST00000335793 DOPEY1Q5JWR5 2465 aa12.28□□□□□ -0.44
CDC42EP4-201ENST00000335793 KNCNA6PVL3 124 aa12.28□□□□□ -0.44
CDC42EP4-201ENST00000335793 PRSS2P07478 247 aa12.28□□□□□ -0.44
CDC42EP4-201ENST00000335793 UBE2D1P51668 147 aa12.27□□□□□ -0.45
CDC42EP4-201ENST00000335793 LINC00315P59091 139 aa12.27□□□□□ -0.45
CDC42EP4-201ENST00000335793 CELSR2Q9HCU4 2923 aa12.27□□□□□ -0.45
CDC42EP4-201ENST00000335793 IGHV1OR15-1A0A075B7D0 117 aa12.27□□□□□ -0.45
CDC42EP4-201ENST00000335793 J3QQQ9 107 aa12.27□□□□□ -0.45
CDC42EP4-201ENST00000335793 TMEM141Q96I45 108 aa12.27□□□□□ -0.45
CDC42EP4-201ENST00000335793 KIF25-AS1Q9Y6Z4 181 aa12.27□□□□□ -0.45
CDC42EP4-201ENST00000335793 IGIPA6NJ69 53 aa12.26□□□□□ -0.45
CDC42EP4-201ENST00000335793 IGLV1-40P01703 118 aa12.26□□□□□ -0.45
CDC42EP4-201ENST00000335793 ZNF22P17026 224 aaPredicted RBP12.26□□□□□ -0.45
CDC42EP4-201ENST00000335793 FAM19A4Q96LR4 140 aa12.26□□□□□ -0.45
CDC42EP4-201ENST00000335793 ANKRD17O75179 2603 aaKnown RBP12.26□□□□□ -0.45
CDC42EP4-201ENST00000335793 CCDC168Q8NDH2 2452 aa12.26□□□□□ -0.45
CDC42EP4-201ENST00000335793 IGHV4OR15-8A0A075B7B6 117 aa12.26□□□□□ -0.45
CDC42EP4-201ENST00000335793 A0A087WW49 117 aa12.26□□□□□ -0.45
CDC42EP4-201ENST00000335793 RS1O15537 224 aa12.26□□□□□ -0.45
CDC42EP4-201ENST00000335793 ZANQ9Y493 2812 aa12.26□□□□□ -0.45
CDC42EP4-201ENST00000335793 IGLV4-69A0A075B6H9 119 aa12.26□□□□□ -0.45
CDC42EP4-201ENST00000335793 A0A0J9YY99 117 aa12.26□□□□□ -0.45
CDC42EP4-201ENST00000335793 ZNRF2Q8NHG8 242 aa12.26□□□□□ -0.45
CDC42EP4-201ENST00000335793 PRO1854Q9UHT4 67 aa12.26□□□□□ -0.45
CDC42EP4-201ENST00000335793 RNASE13Q5GAN3 156 aaKnown RBP12.25□□□□□ -0.45
CDC42EP4-201ENST00000335793 ADARB2-AS1A8MUL3 147 aa12.25□□□□□ -0.45
CDC42EP4-201ENST00000335793 IGHV3-16A0A0C4DH30 117 aa12.24□□□□□ -0.45
CDC42EP4-201ENST00000335793 K7EMT4 169 aa12.24□□□□□ -0.45
CDC42EP4-201ENST00000335793 A0A0J9YX75 114 aa12.24□□□□□ -0.45
CDC42EP4-201ENST00000335793 PRM2P04554 102 aa12.24□□□□□ -0.45
CDC42EP4-201ENST00000335793 TSPEAR-AS2P59090 65 aa12.24□□□□□ -0.45
CDC42EP4-201ENST00000335793 TMEM101Q96IK0 257 aa12.24□□□□□ -0.45
CDC42EP4-201ENST00000335793 A0A0J9YXV3 536 aa12.24□□□□□ -0.45
CDC42EP4-201ENST00000335793 NDUFA7O95182 113 aa12.24□□□□□ -0.45
CDC42EP4-201ENST00000335793 H3BMM0 161 aa12.23□□□□□ -0.45
CDC42EP4-201ENST00000335793 C2orf82Q6UX34 121 aa12.23□□□□□ -0.45
CDC42EP4-201ENST00000335793 HRCT1Q6UXD1 115 aa12.23□□□□□ -0.45
CDC42EP4-201ENST00000335793 UBE2WQ96B02 151 aa12.23□□□□□ -0.45
CDC42EP4-201ENST00000335793 TIMM17AQ99595 171 aa12.23□□□□□ -0.45
CDC42EP4-201ENST00000335793 CSMD2Q7Z408 3487 aa12.23□□□□□ -0.45
CDC42EP4-201ENST00000335793 P0DMU3 169 aa12.22□□□□□ -0.45
CDC42EP4-201ENST00000335793 FAM231AP0DMU4 169 aa12.22□□□□□ -0.45
CDC42EP4-201ENST00000335793 FAM231CP0DMU5 169 aa12.22□□□□□ -0.45
CDC42EP4-201ENST00000335793 DEFB136Q30KP8 78 aa12.22□□□□□ -0.45
CDC42EP4-201ENST00000335793 F5H768 121 aa12.22□□□□□ -0.45
CDC42EP4-201ENST00000335793 C4orf26Q17RF5 130 aa12.22□□□□□ -0.45
CDC42EP4-201ENST00000335793 APRG1Q8IVJ8 170 aa12.22□□□□□ -0.45
CDC42EP4-201ENST00000335793 J3KT08 172 aa12.22□□□□□ -0.45
CDC42EP4-201ENST00000335793 M0QY20 66 aa12.22□□□□□ -0.45
CDC42EP4-201ENST00000335793 CD28P10747 220 aa12.22□□□□□ -0.45
CDC42EP4-201ENST00000335793 COX6B1P14854 86 aa12.22□□□□□ -0.45
CDC42EP4-201ENST00000335793 TRBV27A0A0K0K1C4 114 aa12.21□□□□□ -0.45
CDC42EP4-201ENST00000335793 DEFB131AP59861 70 aa12.21□□□□□ -0.45
CDC42EP4-201ENST00000335793 I3L3M4 83 aa12.21□□□□□ -0.45
CDC42EP4-201ENST00000335793 PSMB8P28062 276 aa12.21□□□□□ -0.45
CDC42EP4-201ENST00000335793 NPC2P61916 151 aa12.21□□□□□ -0.46
CDC42EP4-201ENST00000335793 LINC01619G3V211 115 aa12.2□□□□□ -0.46
CDC42EP4-201ENST00000335793 HOXD3P31249 432 aaPredicted RBP12.2□□□□□ -0.46
CDC42EP4-201ENST00000335793 PROK1P58294 105 aa12.2□□□□□ -0.46
CDC42EP4-201ENST00000335793 LINC01620Q4KN68 170 aa12.2□□□□□ -0.46
CDC42EP4-201ENST00000335793 GCN1Q92616 2671 aaKnown RBP12.2□□□□□ -0.46
CDC42EP4-201ENST00000335793 LGALS9O00182 355 aa12.2□□□□□ -0.46
CDC42EP4-201ENST00000335793 NXPH4O95158 308 aa12.2□□□□□ -0.46
CDC42EP4-201ENST00000335793 SBSPONQ8IVN8 264 aa12.2□□□□□ -0.46
CDC42EP4-201ENST00000335793 KIR2DL5BQ8NHK3 375 aa12.2□□□□□ -0.46
CDC42EP4-201ENST00000335793 CUBNO60494 3623 aa12.2□□□□□ -0.46
CDC42EP4-201ENST00000335793 NSUN5P1Q3KNT7 163 aa12.19□□□□□ -0.46
CDC42EP4-201ENST00000335793 HIST2H2BDQ6DRA6 164 aa12.19□□□□□ -0.46
CDC42EP4-201ENST00000335793 Q6Q795 121 aa12.19□□□□□ -0.46
CDC42EP4-201ENST00000335793 SLC25A29Q8N8R3 303 aa12.19□□□□□ -0.46
CDC42EP4-201ENST00000335793 K7EQG2 157 aa12.19□□□□□ -0.46
CDC42EP4-201ENST00000335793 OR13C6PQ8NH95 151 aa12.19□□□□□ -0.46
CDC42EP4-201ENST00000335793 IGHV3OR16-12A0A075B7B8 117 aa12.18□□□□□ -0.46
CDC42EP4-201ENST00000335793 hADV29S1A0JD25 119 aa12.18□□□□□ -0.46
CDC42EP4-201ENST00000335793 GAGE2AQ6NT46 116 aa12.18□□□□□ -0.46
CDC42EP4-201ENST00000335793 C20orf203Q8NBC4 194 aa12.18□□□□□ -0.46
CDC42EP4-201ENST00000335793 ZNF580Q9UK33 172 aa12.18□□□□□ -0.46
CDC42EP4-201ENST00000335793 IGHV3-30P01768 117 aa12.17□□□□□ -0.46
CDC42EP4-201ENST00000335793 IGHV3-30-5P0DP03 117 aa12.17□□□□□ -0.46
CDC42EP4-201ENST00000335793 C9orf85Q96MD7 179 aa12.17□□□□□ -0.46
CDC42EP4-201ENST00000335793 IGHV3-38A0A0C4DH36 116 aa12.17□□□□□ -0.46
CDC42EP4-201ENST00000335793 MUSTN1Q8IVN3 82 aa12.17□□□□□ -0.46
CDC42EP4-201ENST00000335793 SLURP1P55000 103 aa12.16□□□□□ -0.46
CDC42EP4-201ENST00000335793 RHOHQ15669 191 aa12.16□□□□□ -0.46
CDC42EP4-201ENST00000335793 C3orf22Q8N5N4 141 aa12.16□□□□□ -0.46
CDC42EP4-201ENST00000335793 TRBV6-5A0A0K0K1A5 114 aa12.15□□□□□ -0.46
CDC42EP4-201ENST00000335793 DGAT2L7PQ6IED9 249 aa12.15□□□□□ -0.46
CDC42EP4-201ENST00000335793 LINC01356Q8N9X3 169 aa12.15□□□□□ -0.46
CDC42EP4-201ENST00000335793 CLEC2BQ92478 149 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms